Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21316 Striga asiatica HOM05D007506 ORTHO05D008409 6.2e-119 431.0 254 100.0
Nitab4.5_0002586g0040 Nicotiana tabacum HOM05D007506 ORTHO05D008409 8.1e-10 68.6 54 72.2
Solyc11g006750.1 Solanum lycopersicum HOM05D007506 ORTHO05D008409 8.1e-10 68.6 53 73.6
Peaxi162Scf00519g00621 Petunia axillaris HOM05D007506 ORTHO05D008409 4.0e-09 66.2 41 78.0
GSVIVG01010679001 Vitis vinifera HOM05D007506 ORTHO05D008409 4.0e-09 66.2 40 85.0
CAN.G1373.1 Capsicum annuum HOM05D007506 ORTHO05D008409 5.3e-09 65.9 54 66.7
SalBow6G2037 Salvia bowleyana HOM05D007506 ORTHO05D008409 5.3e-09 65.9 52 73.1
Sopen11g002680 Solanum pennellii HOM05D007506 ORTHO05D008409 5.3e-09 65.9 53 73.6
PGSC0003DMG400023979 Solanum tuberosum HOM05D007506 ORTHO05D008409 9.0e-09 65.1 53 69.8
Migut.F00865 Erythranthe guttata HOM05D007506 ORTHO05D008409 1.5e-08 64.3 54 64.8
Hund06790 Selenicereus undatus HOM05D007506 ORTHO05D008409 3.4e-08 63.2 56 67.9
SalBow3G3829 Salvia bowleyana HOM05D007506 ORTHO05D008409 7.6e-08 62.0 49 65.3
AT5G04750 Arabidopsis thaliana HOM05D012863 ORTHO05D008409 1.3e-07 61.2 36 80.6
CARHR208540 Cardamine hirsuta HOM05D012863 ORTHO05D008409 1.7e-07 60.8 40 75.0
Peaxi162Scf00125g00216 Petunia axillaris HOM05D007506 ORTHO05D008409 1.7e-07 60.8 54 59.3
unitig_899.g14468 Utricularia gibba HOM05D007506 ORTHO05D008409 1.7e-07 60.8 33 93.9
Cc02_g09560 Coffea canephora HOM05D007506 ORTHO05D008409 2.9e-07 60.1 45 73.3
Thecc.10G114000 Theobroma cacao HOM05D007506 ORTHO05D008409 4.9e-07 59.3 40 75.0
Nitab4.5_0005214g0030 Nicotiana tabacum HOM05D007506 ORTHO05D008409 6.4e-07 58.9 34 82.4
Nitab4.5_0010633g0010 Nicotiana tabacum HOM05D007506 ORTHO05D008409 6.4e-07 58.9 34 82.4
Ciclev10017346m.g Citrus clementina HOM05D007506 ORTHO05D008409 8.4e-07 58.5 40 77.5
PGR142G2547 Punica granatum HOM05D007506 ORTHO05D008409 8.4e-07 58.5 51 66.7
SGA_v2.0_scaffold42G15923 Striga asiatica HOM05D000575 ORTHO05D402142 1.4e-06 57.8 34 73.5
AL6G14410 Arabidopsis lyrata HOM05D012863 ORTHO05D008409 1.9e-06 57.4 51 58.8
CSS0050385 Camellia sinensis var. sinensis HOM05D007506 ORTHO05D008409 1.9e-06 57.4 51 62.7
Dinv12843 Davidia involucrata HOM05D007506 ORTHO05D008409 1.9e-06 57.4 54 63.0
Carub.0006s0364 Capsella rubella HOM05D012863 ORTHO05D008409 2.4e-06 57.0 38 73.7
Oeu024806.1 Olea europaea HOM05D007506 ORTHO05D008409 2.4e-06 57.0 53 66.0
TAR633G2594 Trochodendron aralioides HOM05D007506 ORTHO05D008409 2.4e-06 57.0 40 72.5
Hma1.2p1_0756F.1_g213210 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 3.2e-06 56.6 54 61.1
Hma1.2p1_0756F.1_g213215 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 3.2e-06 56.6 54 61.1
Hma1.2p1_1491F.1_g286710 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 3.2e-06 56.6 54 61.1
THA.LOC104816468 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 3.2e-06 56.6 34 79.4
Sc20g0001140 Simmondsia chinensis HOM05D007506 ORTHO05D008409 4.2e-06 56.2 56 57.1
THA.LOC109117254 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 4.2e-06 56.2 64 51.6
CAN.G1417.6 Capsicum annuum HOM05D007506 ORTHO05D008409 5.5e-06 55.8 48 66.7
Duzib106G0675 Durio zibethinus HOM05D007506 ORTHO05D008409 5.5e-06 55.8 40 75.0
Manes.07G086800 Manihot esculenta HOM05D007506 ORTHO05D008409 5.5e-06 55.8 40 75.0
A03p01810 Brassica napus HOM05D012863 ORTHO05D008409 7.1e-06 55.5 31 83.9
C03p02190 Brassica napus HOM05D012863 ORTHO05D008409 7.1e-06 55.5 31 83.9
BolC3t12770H Brassica oleracea HOM05D012863 ORTHO05D008409 7.1e-06 55.5 31 83.9
BraA03t09553Z Brassica rapa HOM05D012863 ORTHO05D008409 7.1e-06 55.5 31 83.9
Sp6g38070 Schrenkiella parvula HOM05D012863 ORTHO05D008409 7.1e-06 55.5 38 71.1
Atru.chr12.1049 Acer truncatum HOM05D007506 ORTHO05D008409 9.3e-06 55.1 51 58.8
CANSAT56G4328 Cannabis sativa HOM05D007506 ORTHO05D008409 9.3e-06 55.1 44 65.9
CiPaw.14G033800 Carya illinoinensis HOM05D007506 ORTHO05D008409 9.3e-06 55.1 47 61.7
Potri.010G240401 Populus trichocarpa HOM05D007506 ORTHO05D008409 9.3e-06 55.1 31 87.1


User provided reference genes

Program Settings