Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 6.9e-98 360.9 220 100.0
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 1.9e-71 273.1 182 76.9
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 4.6e-70 268.5 174 79.9
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 6.1e-70 268.1 172 79.1
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 1.5e-68 263.5 176 77.3
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 3.3e-68 262.3 168 78.6
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 5.7e-68 261.5 173 78.0
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 9.7e-68 260.8 175 76.6
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 1.6e-67 260.0 175 79.4
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 2.8e-67 259.2 176 76.7
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 3.1e-66 255.8 177 78.0
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 6.9e-66 254.6 176 76.7
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 1.5e-65 253.4 179 73.2
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 2.6e-65 252.7 177 75.7
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 3.4e-65 252.3 176 75.6
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 3.4e-65 252.3 176 75.6
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 4.5e-65 251.9 177 76.3
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 4.5e-65 251.9 175 76.0
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 7.7e-65 251.1 175 74.3
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 1.0e-64 250.8 176 73.3
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 1.7e-64 250.0 179 72.6
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 2.9e-64 249.2 179 73.7
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 3.8e-64 248.8 176 74.4
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 5.0e-64 248.4 179 72.1
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 8.5e-64 247.7 178 73.6
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 2.5e-63 246.1 157 77.1
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 3.2e-63 245.7 192 68.8
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 4.2e-63 245.4 175 74.3
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 4.2e-63 245.4 176 74.4
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 4.2e-63 245.4 176 73.3
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 4.2e-63 245.4 176 73.3
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 7.2e-63 244.6 171 76.0
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 1.2e-62 243.8 177 73.4
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 1.6e-62 243.4 177 73.4
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 2.7e-62 242.7 157 79.0
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 2.7e-62 242.7 177 72.3
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 4.6e-62 241.9 179 70.9
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 6.1e-62 241.5 174 72.4
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 6.1e-62 241.5 175 72.6
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 6.1e-62 241.5 173 74.0
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 1.4e-61 240.4 152 80.3
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 1.4e-61 240.4 176 73.3
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 1.8e-61 240.0 179 70.9
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.8e-61 240.0 179 70.9
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 2.3e-61 239.6 173 71.7
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 3.0e-61 239.2 175 71.4
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 3.9e-61 238.8 173 71.1
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 3.9e-61 238.8 174 70.1
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 5.1e-61 238.4 174 70.1
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 5.1e-61 238.4 173 72.8
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 6.7e-61 238.0 173 71.7
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 6.7e-61 238.0 176 71.0
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 1.1e-60 237.3 179 68.2
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 1.5e-60 236.9 162 74.7
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 1.5e-60 236.9 148 80.4
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 3.3e-60 235.7 175 72.6
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 3.3e-60 235.7 178 70.2
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 3.3e-60 235.7 179 69.8
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 4.4e-60 235.3 143 81.1
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 7.4e-60 234.6 177 71.8
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 9.7e-60 234.2 171 71.9
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 9.7e-60 234.2 177 71.2
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 9.7e-60 234.2 134 85.8
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 1.7e-59 233.4 172 71.5
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 1.7e-59 233.4 177 70.1
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 2.8e-59 232.6 178 71.3
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 3.7e-59 232.3 144 79.9
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 6.3e-59 231.5 152 76.3
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 1.8e-58 229.9 175 67.4
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 5.3e-58 228.4 175 66.3
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 9.1e-58 227.6 175 65.7
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 9.1e-58 227.6 175 66.3
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 2.0e-57 226.5 175 65.7
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 4.5e-57 225.3 130 83.8
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 5.9e-57 224.9 137 79.6
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 7.7e-57 224.6 172 68.6
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 7.7e-57 224.6 175 65.7
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 1.0e-56 224.2 177 65.5
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 1.0e-56 224.2 177 65.5
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 2.9e-56 222.6 174 67.8
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 8.5e-56 221.1 178 64.6
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 8.5e-56 221.1 178 64.6
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 2.5e-55 219.5 132 81.8
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 3.2e-55 219.2 142 80.3
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.6e-54 216.9 180 65.0
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 5.7e-52 208.4 237 53.2
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 4.8e-51 205.3 175 60.0
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea HOM05D006601 ORTHO05D008281 1.4e-50 203.8 177 63.8
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 3.1e-50 202.6 159 67.9
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 1.2e-44 184.1 148 66.2
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 2.6e-44 183.0 134 67.9
CDE04G0959 Ceratophyllum demersum HOM05D006601 ORTHO05D008281 3.1e-42 176.0 176 56.8
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 5.3e-42 175.3 180 54.4
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 1.6e-41 173.7 170 53.5
Actinidia31106 Actinidia chinensis HOM05D006601 ORTHO05D008281 6.5e-40 168.3 91 89.0
Nitab4.5_0002586g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 1.1e-34 151.0 136 64.7
Haze_03300 Corylus avellana HOM05D006601 ORTHO05D008281 1.2e-33 147.5 123 69.1
AUR62042084 Chenopodium quinoa HOM05D006601 ORTHO05D008281 2.9e-32 142.9 175 50.9
Sc09g0005300 Simmondsia chinensis HOM05D006601 ORTHO05D008281 4.2e-31 139.0 134 60.4
BcaC07g39592 Brassica carinata HOM05D006601 ORTHO05D008281 8.0e-30 134.8 184 47.3
MCO05G050 Micromonas commoda HOM05D006601 ORTHO05D008281 2.0e-28 130.2 131 55.7
Cre18.g749347 Chlamydomonas reinhardtii HOM05D006601 ORTHO05D008281 3.7e-27 125.9 149 48.3
PSO692G0001 Papaver somniferum HOM05D006601 ORTHO05D008281 4.5e-25 119.0 113 62.8
PSO801G0555 Papaver somniferum HOM05D006601 ORTHO05D008281 4.5e-25 119.0 113 62.8
CiPaw.14G033700 Carya illinoinensis HOM05D006601 ORTHO05D008281 4.4e-20 102.4 83 68.7
Ah.06g186680 Amaranthus hybridus HOM05D006601 ORTHO05D008281 1.3e-19 100.9 96 58.3
Aqoxy2G01116 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 2.2e-19 100.1 101 59.4
Cfa024623 Carpinus fangiana HOM05D006601 ORTHO05D008281 3.0e-16 89.7 108 42.6
Zm00001eb039400 Zea mays HOM05D006601 ORTHO05D008281 3.0e-16 89.7 96 56.2
Lsat_1_v5_gn_4_8660 Lactuca sativa HOM05D006601 ORTHO05D008281 6.2e-14 82.0 56 73.2
EL10Ac7g17292 Beta vulgaris HOM05D006601 ORTHO05D008281 7.0e-10 68.6 31 87.1
Hma1.2p1_1491F.1_g286720 Hydrangea macrophylla HOM05D006601 ORTHO05D008281 3.5e-09 66.2 37 86.5
Aqoxy2G01117 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 6.0e-09 65.5 31 83.9
BcaC02g09271 Brassica carinata HOM05D006601 ORTHO05D008281 8.6e-08 61.6 117 45.3
EL10Ac8g19171 Beta vulgaris HOM05D006601 ORTHO05D008281 2.1e-06 57.0 25 88.0
AagrBONN_evm.TU.Sc2ySwM_228.2727 Anthoceros agrestis HOM05D006601 ORTHO05D008281 3.6e-06 56.2 60 55.0


User provided reference genes

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