Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 3.2e-196 688.3 378 100.0
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 3.0e-125 452.6 391 66.5
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 3.3e-116 422.5 408 62.0
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 7.9e-110 401.4 408 60.5
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 6.0e-102 375.2 392 58.7
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 3.9e-101 372.5 382 59.9
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 1.6e-99 367.1 390 57.9
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 6.9e-98 361.7 380 60.3
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 5.9e-97 358.6 366 59.0
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 1.3e-96 357.5 391 58.6
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 2.9e-96 356.3 377 59.7
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 2.1e-94 350.1 390 57.4
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 2.1e-94 350.1 390 56.4
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.6e-94 349.4 390 55.9
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 1.3e-93 347.4 390 56.7
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.8e-93 347.1 390 55.9
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 3.9e-93 345.9 394 56.1
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 1.5e-92 344.0 394 55.6
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 1.9e-92 343.6 388 57.2
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 2.5e-92 343.2 378 56.3
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 3.3e-92 342.8 390 57.7
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 4.3e-92 342.4 390 55.6
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 9.7e-92 341.3 390 55.1
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 1.3e-91 340.9 387 58.1
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 2.2e-91 340.1 380 56.3
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.7e-91 339.3 390 54.9
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 4.8e-91 339.0 378 59.0
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 6.3e-91 338.6 390 55.9
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 1.1e-90 337.8 411 53.8
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 5.3e-90 335.5 401 52.9
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 4.5e-89 332.4 390 54.4
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 5.9e-89 332.0 381 57.0
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 7.7e-89 331.6 390 54.1
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 1.0e-88 331.3 405 53.1
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 1.0e-88 331.3 407 54.1
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 2.2e-88 330.1 396 53.5
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 1.9e-87 327.0 396 52.8
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 2.5e-87 326.6 417 52.8
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 4.2e-87 325.9 389 52.7
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 3.6e-86 322.8 389 55.0
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 6.1e-86 322.0 410 52.7
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 1.4e-85 320.9 402 52.0
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.8e-85 320.5 368 54.6
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 6.7e-85 318.5 384 54.7
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 2.6e-84 316.6 387 52.5
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 2.6e-84 316.6 383 54.3
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 3.3e-84 316.2 384 54.9
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 2.2e-83 313.5 361 58.4
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 3.7e-83 312.8 396 52.3
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 4.8e-83 312.4 384 53.1
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 6.3e-83 312.0 394 52.5
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 8.2e-83 311.6 327 60.6
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 1.4e-82 310.8 394 52.3
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 1.4e-82 310.8 321 59.8
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 2.4e-82 310.1 392 51.3
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 6.9e-82 308.5 392 52.3
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 6.9e-82 308.5 392 52.3
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 6.9e-82 308.5 383 53.5
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 1.2e-81 307.8 392 52.0
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 2.0e-81 307.0 392 52.0
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 2.6e-81 306.6 398 52.5
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 2.9e-80 303.1 387 51.4
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 3.8e-80 302.8 379 53.8
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 6.5e-80 302.0 396 51.3
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 7.2e-79 298.5 377 54.4
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 2.7e-78 296.6 395 51.1
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 2.6e-76 290.0 390 50.8
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 4.4e-76 289.3 385 53.5
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 4.4e-76 289.3 395 50.9
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.7e-75 287.3 318 56.0
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 3.7e-75 286.2 398 50.0
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 4.8e-75 285.8 390 51.3
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 4.1e-74 282.7 378 50.5
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 7.0e-74 282.0 379 51.2
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 5.9e-73 278.9 331 55.3
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 2.1e-70 270.4 351 52.7
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 3.0e-69 266.5 398 49.5
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 5.2e-69 265.8 382 50.0
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 2.6e-68 263.5 404 45.5
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 7.5e-68 261.9 327 52.6
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 2.8e-67 260.0 380 50.0
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 3.1e-66 256.5 395 46.1
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 1.2e-65 254.6 393 46.3
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 7.7e-65 251.9 433 42.5
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.9e-64 250.0 395 47.3
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 5.0e-64 249.2 387 45.2
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 1.9e-63 247.3 336 52.7
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.7e-62 243.4 402 46.5
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 1.0e-61 241.5 356 46.6
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 1.4e-61 241.1 296 53.7
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 8.8e-61 238.4 395 45.1
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 2.2e-59 233.8 398 44.2
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 8.3e-59 231.9 261 59.8
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 7.0e-50 202.2 244 58.2
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 4.5e-49 199.5 293 46.8
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 2.3e-48 197.2 430 39.3
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 1.9e-47 194.1 384 42.4
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 2.8e-46 190.3 331 43.2
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 6.1e-46 189.1 371 40.4
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.0e-44 184.1 174 64.4
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 1.7e-43 181.0 369 37.9
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 5.9e-41 172.6 197 57.4
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 5.2e-37 159.5 308 41.2
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 6.4e-35 152.5 239 40.6
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 1.9e-34 151.0 401 36.9
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 1.7e-32 144.4 115 72.2
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 9.9e-28 128.6 184 45.1
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 6.0e-25 119.4 199 48.2
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 4.1e-18 96.7 174 44.8
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 5.4e-18 96.3 174 44.8
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 4.6e-17 93.2 54 94.4
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 1.0e-16 92.0 55 89.1
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 8.1e-14 82.4 306 33.0
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 6.4e-11 72.8 138 44.2
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 1.4e-10 71.6 310 31.6
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 1.2e-09 68.6 39 82.1
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 1.6e-09 68.2 88 48.9
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 6.6e-08 62.8 66 57.6


User provided reference genes

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