Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold629G53283 Striga asiatica HOM05D053472 ORTHO05D000656 1.9e-124 449.1 221 100.0
SGA_v2.0_scaffold103G29954 Striga asiatica HOM05D053472 ORTHO05D405412 1.7e-19 100.5 94 61.7
SGA_v2.0_scaffold32G13069 Striga asiatica HOM05D000838 ORTHO05D000656 2.2e-11 73.6 111 43.2
SGA_v2.0_scaffold90G27670 Striga asiatica HOM05D000838 ORTHO05D000656 9.2e-10 68.2 86 47.7
MSTRG.16751 Avicennia marina HOM05D000838 ORTHO05D000656 3.5e-09 66.2 84 44.0
SalBow6G6886 Salvia bowleyana HOM05D000838 ORTHO05D000656 6.0e-09 65.5 78 44.9
Oeu013700.2 Olea europaea HOM05D000838 ORTHO05D000656 1.0e-08 64.7 84 39.3
Nitab4.5_0003080g0120 Nicotiana tabacum HOM05D000838 ORTHO05D000656 2.5e-07 60.1 78 43.6
Solyc01g108130.4 Solanum lycopersicum HOM05D000838 ORTHO05D000656 3.3e-07 59.7 84 40.5
Sopen01g050360 Solanum pennellii HOM05D000838 ORTHO05D000656 3.3e-07 59.7 84 40.5
PGSC0003DMG400025791 Solanum tuberosum HOM05D000838 ORTHO05D000656 4.3e-07 59.3 84 44.0
Oeu009751.1 Olea europaea HOM05D000838 ORTHO05D000656 5.6e-07 58.9 78 43.6
Cc02_g18680 Coffea canephora HOM05D000838 ORTHO05D000656 9.6e-07 58.2 78 41.0
Nitab4.5_0003503g0050 Nicotiana tabacum HOM05D000838 ORTHO05D000656 2.1e-06 57.0 78 41.0
Oeu006960.1 Olea europaea HOM05D000838 ORTHO05D000656 3.6e-06 56.2 78 42.3
CAN.G1041.26 Capsicum annuum HOM05D000838 ORTHO05D000656 6.2e-06 55.5 84 38.1


User provided reference genes

Program Settings