Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 4.3e-73 278.1 162 100.0
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 5.1e-66 254.6 194 82.5
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 6.0e-59 231.1 165 84.8
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 5.7e-57 224.6 166 72.9
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 5.3e-55 218.0 166 77.1
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.7e-53 213.0 169 69.2
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 2.5e-49 199.1 160 67.5
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 1.6e-48 196.4 165 73.3
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 8.2e-48 194.1 164 64.0
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.1e-47 192.2 162 70.4
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 9.0e-47 190.7 166 64.5
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 1.2e-46 190.3 164 69.5
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.6e-46 189.1 162 69.8
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 7.7e-46 187.6 164 69.5
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 1.6e-43 179.9 165 61.8
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 2.1e-43 179.5 169 60.4
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 2.3e-42 176.0 165 62.4
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 2.5e-41 172.6 167 58.7
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 2.5e-41 172.6 166 63.3
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 2.5e-41 172.6 168 57.1
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 4.3e-41 171.8 156 58.3
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 9.7e-41 170.6 157 61.1
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 1.3e-40 170.2 156 66.7
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 1.3e-40 170.2 162 56.2
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 1.7e-40 169.9 160 59.4
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 1.7e-40 169.9 157 68.2
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 4.8e-40 168.3 167 58.7
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 6.3e-40 167.9 162 56.2
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 1.1e-39 167.2 168 56.5
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 1.1e-39 167.2 161 59.6
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.1e-39 167.2 163 58.9
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 2.4e-39 166.0 165 57.6
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 2.4e-39 166.0 158 58.2
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 3.1e-39 165.6 167 58.1
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 4.1e-39 165.2 163 54.6
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 4.1e-39 165.2 158 58.9
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 6.9e-39 164.5 168 61.9
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 2.0e-38 162.9 165 53.9
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 3.4e-38 162.2 171 55.0
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 4.5e-38 161.8 164 53.0
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 4.5e-38 161.8 160 56.2
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 5.9e-38 161.4 160 56.2
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 5.9e-38 161.4 161 58.4
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 5.9e-38 161.4 162 56.8
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 7.7e-38 161.0 127 66.1
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 7.7e-38 161.0 160 55.0
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 7.7e-38 161.0 176 55.1
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 1.3e-37 160.2 160 58.8
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 5.0e-37 158.3 162 59.9
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 6.5e-37 157.9 165 60.6
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 8.5e-37 157.5 155 56.1
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 1.1e-36 157.1 160 61.9
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 1.4e-36 156.8 167 56.3
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.9e-36 156.4 163 55.2
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 1.9e-36 156.4 161 55.9
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 3.2e-36 155.6 156 57.1
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 7.2e-36 154.5 159 52.8
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 7.2e-36 154.5 163 63.2
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 7.2e-36 154.5 161 57.1
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 1.2e-35 153.7 160 63.1
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 1.6e-35 153.3 161 55.3
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.1e-35 152.9 163 63.8
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 2.1e-35 152.9 154 54.5
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 2.7e-35 152.5 166 59.0
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 3.6e-35 152.1 162 51.2
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 4.7e-35 151.8 138 71.7
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 7.9e-35 151.0 178 50.0
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.0e-34 150.6 159 56.0
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.4e-34 150.2 167 54.5
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 2.3e-34 149.4 160 51.2
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 2.3e-34 149.4 153 54.9
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 3.9e-34 148.7 164 56.7
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 2.6e-33 146.0 163 54.6
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 5.7e-33 144.8 161 53.4
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 5.7e-33 144.8 173 49.7
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 5.7e-33 144.8 160 58.1
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 3.7e-32 142.1 163 56.4
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 1.1e-31 140.6 160 52.5
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 1.4e-31 140.2 153 54.9
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 1.8e-31 139.8 166 49.4
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 2.4e-31 139.4 159 49.7
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 4.1e-31 138.7 163 56.4
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 1.2e-30 137.1 154 50.6
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 1.6e-30 136.7 157 55.4
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 6.5e-29 131.3 156 53.8
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 8.5e-29 131.0 136 50.0
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 4.2e-28 128.6 151 52.3
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 1.6e-27 126.7 143 51.7
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 2.1e-27 126.3 157 50.3
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 8.0e-27 124.4 136 47.8
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.8e-26 123.2 164 46.3
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 3.0e-26 122.5 144 50.7
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 5.2e-26 121.7 144 50.7
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 1.5e-25 120.2 155 47.7
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 3.3e-25 119.0 144 49.3
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 9.7e-25 117.5 162 46.9
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 1.7e-24 116.7 185 44.9
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 2.8e-24 115.9 161 45.3
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 3.7e-24 115.5 151 45.0
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 3.7e-24 115.5 146 45.9
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 4.8e-24 115.2 155 47.1
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 6.3e-24 114.8 149 47.7
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 3.1e-23 112.5 162 43.2
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 2.0e-22 109.8 130 45.4
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 3.5e-22 109.0 160 46.2
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 3.5e-22 109.0 160 46.2
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 3.5e-22 109.0 159 42.8
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 4.5e-22 108.6 163 43.6
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 7.7e-22 107.8 160 43.8
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 1.3e-21 107.1 159 44.0
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 1.7e-21 106.7 136 47.8
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 1.7e-21 106.7 158 43.7
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 1.7e-21 106.7 129 48.1
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 2.2e-21 106.3 159 44.0
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 2.2e-21 106.3 136 44.9
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 2.2e-21 106.3 151 45.0
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 2.9e-21 105.9 159 43.4
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 3.8e-21 105.5 136 44.9
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 3.8e-21 105.5 142 46.5
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 6.5e-21 104.8 162 42.6
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 6.5e-21 104.8 155 43.9
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 6.5e-21 104.8 162 42.6
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 1.5e-20 103.6 136 43.4
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 1.9e-20 103.2 155 44.5
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 3.2e-20 102.4 139 45.3
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 5.5e-20 101.7 160 43.1
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 5.5e-20 101.7 137 44.5
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 5.5e-20 101.7 119 50.4
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 5.5e-20 101.7 132 48.5
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 3.6e-19 99.0 143 42.0
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 4.7e-19 98.6 139 43.9
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 6.1e-19 98.2 89 57.3
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 6.1e-19 98.2 89 57.3
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 1.0e-18 97.4 139 44.6
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 1.2e-17 94.0 157 41.4
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 2.2e-16 89.7 120 44.2
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 4.8e-16 88.6 88 71.6
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 1.8e-15 86.7 166 39.8
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 3.1e-15 85.9 154 41.6
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 3.1e-15 85.9 152 42.1
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 7.0e-15 84.7 135 41.5
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 7.0e-15 84.7 152 41.4
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 2.0e-14 83.2 65 66.2
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 3.5e-14 82.4 152 40.1
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 3.5e-14 82.4 152 40.1
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 5.9e-14 81.6 124 41.1
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 7.7e-14 81.3 151 39.1
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 1.0e-13 80.9 157 35.7
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 2.2e-13 79.7 166 32.5
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 1.1e-12 77.4 154 39.0
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 1.1e-12 77.4 70 58.6
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 1.5e-12 77.0 90 50.0
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 2.7e-11 72.8 105 45.7
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 4.7e-11 72.0 74 51.4
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 2.3e-10 69.7 136 34.6
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 3.0e-10 69.3 88 46.6
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 4.0e-10 68.9 164 31.1
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 5.2e-10 68.6 72 51.4
SEGI_14551 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.4e-07 60.5 59 54.2
SEGI_24806 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.4e-07 60.5 59 54.2
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 3.1e-07 59.3 78 44.9
Nn4g25974 Nelumbo nucifera HOM05D066638 ORTHO05D004842 1.2e-06 57.4 60 53.3
Nn7g37876 Nelumbo nucifera HOM05D001231 ORTHO05D001012 2.0e-06 56.6 59 54.2
Nn7g37465 Nelumbo nucifera HOM05D004226 ORTHO05D004842 2.7e-06 56.2 59 49.2


User provided reference genes

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