Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold624G53237 Striga asiatica HOM05D006153 ORTHO05D007701 1.9e-62 242.3 115 100.0
Migut.I00275 Erythranthe guttata HOM05D006153 ORTHO05D007701 2.5e-19 99.0 110 47.3
arahy.Tifrunner.gnm1.ann1.EHR7LK Arachis hypogaea HOM05D006153 ORTHO05D007701 1.0e-12 77.0 51 60.8
Peaxi162Scf00016g00267 Petunia axillaris HOM05D006153 ORTHO05D007701 1.0e-12 77.0 81 49.4
Dinv15786 Davidia involucrata HOM05D006153 ORTHO05D007701 1.4e-12 76.6 107 45.8
QL11p029270 Quercus lobata HOM05D006153 ORTHO05D007701 1.4e-12 76.6 50 66.0
A01p35140 Brassica napus HOM05D006153 ORTHO05D007701 2.3e-12 75.9 85 50.6
BraA01t03596Z Brassica rapa HOM05D006153 ORTHO05D007701 2.3e-12 75.9 85 50.6
VMungo0720G0345 Vigna mungo HOM05D006153 ORTHO05D007701 2.3e-12 75.9 83 47.0
Peaxi162Scf00152g00320 Petunia axillaris HOM05D006153 ORTHO05D007701 5.1e-12 74.7 86 45.3
Eucgr.G00438 Eucalyptus grandis HOM05D006153 ORTHO05D007701 6.7e-12 74.3 112 38.4
Manes.07G064400 Manihot esculenta HOM05D006153 ORTHO05D007701 8.8e-12 73.9 65 49.2
Glyma.10G259200 Glycine max HOM05D006153 ORTHO05D007701 1.1e-11 73.6 85 42.4
TAR381G0917 Trochodendron aralioides HOM05D006153 ORTHO05D007701 1.1e-11 73.6 77 48.1
Duzib052G0610 Durio zibethinus HOM05D006153 ORTHO05D007701 1.5e-11 73.2 106 40.6
Oeu013772.1 Olea europaea HOM05D006153 ORTHO05D007701 2.0e-11 72.8 99 39.4
Dinv42217 Davidia involucrata HOM05D006153 ORTHO05D007701 2.5e-11 72.4 105 42.9
Phvul.007G043000 Phaseolus vulgaris HOM05D006153 ORTHO05D007701 3.3e-11 72.0 42 69.0
Cfa004694 Carpinus fangiana HOM05D006153 ORTHO05D007701 4.3e-11 71.6 48 56.2
Gorai.002G009800 Gossypium raimondii HOM05D006153 ORTHO05D007701 4.3e-11 71.6 50 56.0
Gohir.A01G008400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 5.7e-11 71.2 43 65.1
Glyma.20G131700 Glycine max HOM05D006153 ORTHO05D007701 7.4e-11 70.9 42 66.7
HanXRQChr16g0514461 Helianthus annuus HOM05D006153 ORTHO05D007701 7.4e-11 70.9 104 42.3
Sabra16G0186000 Salix brachista HOM05D006153 ORTHO05D007701 7.4e-11 70.9 42 66.7
Thecc.02G113400 Theobroma cacao HOM05D006153 ORTHO05D007701 7.4e-11 70.9 48 58.3
Potri.001G296900 Populus trichocarpa HOM05D006153 ORTHO05D007701 9.7e-11 70.5 42 66.7
BcaB04g20697 Brassica carinata HOM05D006153 ORTHO05D007701 1.3e-10 70.1 81 49.4
Cpa.g.sc200.7 Carica papaya HOM05D006153 ORTHO05D007701 1.3e-10 70.1 106 39.6
COL.COLO4_32545 Corchorus olitorius HOM05D006153 ORTHO05D007701 1.3e-10 70.1 86 40.7
Sc14g0002580 Simmondsia chinensis HOM05D006153 ORTHO05D007701 1.3e-10 70.1 86 41.9
CSS0010428 Camellia sinensis var. sinensis HOM05D006153 ORTHO05D007701 1.7e-10 69.7 49 59.2
Haze_10299 Corylus avellana HOM05D006153 ORTHO05D007701 1.7e-10 69.7 72 47.2
HanXRQChr16g0514451 Helianthus annuus HOM05D006153 ORTHO05D007701 2.2e-10 69.3 80 41.2
Peaxi162Scf00003g00261 Petunia axillaris HOM05D006153 ORTHO05D007701 2.2e-10 69.3 107 37.4
Sp3g17600 Schrenkiella parvula HOM05D006153 ORTHO05D007701 2.2e-10 69.3 42 69.0
Actinidia34374 Actinidia chinensis HOM05D006153 ORTHO05D007701 2.8e-10 68.9 119 36.1
DCAR_001674 Daucus carota HOM05D006153 ORTHO05D007701 2.8e-10 68.9 47 59.6
BcaC05g28465 Brassica carinata HOM05D006153 ORTHO05D007701 6.3e-10 67.8 42 69.0
A05p30090 Brassica napus HOM05D006153 ORTHO05D007701 6.3e-10 67.8 42 69.0
C05p45510 Brassica napus HOM05D006153 ORTHO05D007701 6.3e-10 67.8 42 69.0
BolC5t33274H Brassica oleracea HOM05D006153 ORTHO05D007701 6.3e-10 67.8 42 69.0
BraA05t21849Z Brassica rapa HOM05D006153 ORTHO05D007701 6.3e-10 67.8 42 69.0
Lalb_Chr06g0165291 Lupinus albus HOM05D006153 ORTHO05D007701 6.3e-10 67.8 101 35.6
Nitab4.5_0004685g0060 Nicotiana tabacum HOM05D006153 ORTHO05D007701 6.3e-10 67.8 63 52.4
Nitab4.5_0012681g0010 Nicotiana tabacum HOM05D006153 ORTHO05D007701 6.3e-10 67.8 83 39.8
PGR042G3678 Punica granatum HOM05D006153 ORTHO05D007701 6.3e-10 67.8 83 43.4
A01p35130 Brassica napus HOM05D006153 ORTHO05D007701 8.2e-10 67.4 42 66.7
BraA01t03595Z Brassica rapa HOM05D006153 ORTHO05D007701 8.2e-10 67.4 42 66.7
Haze_10289 Corylus avellana HOM05D006153 ORTHO05D007701 8.2e-10 67.4 43 58.1
Thhalv10021914m.g Eutrema salsugineum HOM05D006153 ORTHO05D007701 8.2e-10 67.4 42 66.7
Gohir.D13G044400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 8.2e-10 67.4 104 36.5
Gorai.013G049200 Gossypium raimondii HOM05D006153 ORTHO05D007701 8.2e-10 67.4 104 36.5
Lalb_Chr02g0145121 Lupinus albus HOM05D006153 ORTHO05D007701 8.2e-10 67.4 43 60.5
Sabra09G0070400 Salix brachista HOM05D006153 ORTHO05D007701 8.2e-10 67.4 42 59.5
Duzib132G0541 Durio zibethinus HOM05D006153 ORTHO05D007701 1.1e-09 67.0 48 56.2
Nitab4.5_0001105g0220 Nicotiana tabacum HOM05D006153 ORTHO05D007701 1.1e-09 67.0 42 66.7
Prupe.8G140400 Prunus persica HOM05D006153 ORTHO05D007701 1.1e-09 67.0 73 50.7
Hund06709 Selenicereus undatus HOM05D006153 ORTHO05D007701 1.1e-09 67.0 86 39.5
BcaB04g20696 Brassica carinata HOM05D006153 ORTHO05D007701 1.4e-09 66.6 42 64.3
DCAR_001679 Daucus carota HOM05D006153 ORTHO05D007701 1.4e-09 66.6 47 57.4
ECA234G4313 Erigeron canadensis HOM05D006153 ORTHO05D007701 1.4e-09 66.6 65 49.2
Nitab4.5_0002017g0030 Nicotiana tabacum HOM05D006153 ORTHO05D007701 1.4e-09 66.6 57 47.4
Sed0025917 Sechium edule HOM05D006153 ORTHO05D007701 1.4e-09 66.6 81 38.3
BcaB06g26014 Brassica carinata HOM05D006153 ORTHO05D007701 1.8e-09 66.2 42 66.7
AL3G32960 Arabidopsis lyrata HOM05D006153 ORTHO05D007701 2.4e-09 65.9 42 64.3
AT3G19550 Arabidopsis thaliana HOM05D006153 ORTHO05D007701 3.1e-09 65.5 42 64.3
DCAR_003609 Daucus carota HOM05D006153 ORTHO05D007701 3.1e-09 65.5 66 51.5
MD05G1096000 Malus domestica HOM05D006153 ORTHO05D007701 3.1e-09 65.5 41 68.3
Nn5g30510 Nelumbo nucifera HOM05D006153 ORTHO05D007701 3.1e-09 65.5 47 55.3
TWI23G0900 Tripterygium wilfordii HOM05D006153 ORTHO05D007701 3.1e-09 65.5 76 40.8
BcaC09g48920 Brassica carinata HOM05D006153 ORTHO05D007701 4.1e-09 65.1 42 64.3
C01p44580 Brassica napus HOM05D006153 ORTHO05D007701 4.1e-09 65.1 42 64.3
Carub.0003s1938 Capsella rubella HOM05D006153 ORTHO05D007701 4.1e-09 65.1 42 64.3
BolC1t04422H Brassica oleracea HOM05D006153 ORTHO05D007701 5.3e-09 64.7 42 64.3
CARHR094970 Cardamine hirsuta HOM05D006153 ORTHO05D007701 5.3e-09 64.7 42 64.3
Lj1g0020403 Lotus japonicus HOM05D006153 ORTHO05D007701 5.3e-09 64.7 76 40.8
PSO541G5112 Papaver somniferum HOM05D006153 ORTHO05D007701 5.3e-09 64.7 42 61.9
Manes.10G074900 Manihot esculenta HOM05D006153 ORTHO05D007701 6.9e-09 64.3 48 56.2
Solyc01g107280.3 Solanum lycopersicum HOM05D006153 ORTHO05D007701 6.9e-09 64.3 84 39.3
Sopen01g049530 Solanum pennellii HOM05D006153 ORTHO05D007701 6.9e-09 64.3 76 42.1
Actinidia27982 Actinidia chinensis HOM05D006153 ORTHO05D007701 9.1e-09 63.9 42 66.7
Aa31LG8G6290 Aethionema arabicum HOM05D006153 ORTHO05D007701 9.1e-09 63.9 44 56.8
Potri.009G091100 Populus trichocarpa HOM05D006153 ORTHO05D007701 9.1e-09 63.9 42 64.3
EL10Ac8g19360 Beta vulgaris HOM05D006153 ORTHO05D007701 1.2e-08 63.5 49 57.1
RcHm_v2.0_Chr6g0253971 Rosa chinensis HOM05D006153 ORTHO05D007701 1.2e-08 63.5 42 69.0
FvH4_2g04480 Fragaria vesca HOM05D006153 ORTHO05D007701 1.5e-08 63.2 110 39.1
FAN24G1230 Fragaria x ananassa HOM05D006153 ORTHO05D007701 1.5e-08 63.2 110 39.1
CiPaw.05G015200 Carya illinoinensis HOM05D006153 ORTHO05D007701 2.0e-08 62.8 84 41.7
Haze_10254 Corylus avellana HOM05D006153 ORTHO05D007701 2.0e-08 62.8 51 54.9
MD10G1102200 Malus domestica HOM05D006153 ORTHO05D007701 2.0e-08 62.8 41 63.4
QL11p031990 Quercus lobata HOM05D006153 ORTHO05D007701 2.0e-08 62.8 83 38.6
FAN20G1027 Fragaria x ananassa HOM05D006153 ORTHO05D007701 2.6e-08 62.4 51 54.9
FAN27G0726 Fragaria x ananassa HOM05D006153 ORTHO05D007701 2.6e-08 62.4 51 54.9
MELO3C018509.2 Cucumis melo HOM05D006153 ORTHO05D007701 3.4e-08 62.0 49 51.0
Lsat_1_v5_gn_5_114460 Lactuca sativa HOM05D006153 ORTHO05D007701 3.4e-08 62.0 84 40.5
ATR0030G019 Amborella trichopoda HOM05D006153 ORTHO05D007701 4.5e-08 61.6 46 54.3
Thhalv10021904m.g Eutrema salsugineum HOM05D006153 ORTHO05D007701 4.5e-08 61.6 42 61.9
AUR62027357 Chenopodium quinoa HOM05D006153 ORTHO05D007701 5.9e-08 61.2 48 52.1
AUR62031329 Chenopodium quinoa HOM05D006153 ORTHO05D007701 5.9e-08 61.2 48 52.1
GSVIVG01037871001 Vitis vinifera HOM05D006153 ORTHO05D007701 5.9e-08 61.2 50 50.0
ClCG02G006680 Citrullus lanatus HOM05D006153 ORTHO05D007701 7.7e-08 60.8 50 48.0
MBI16_g15146_MAGBIO Magnolia biondii HOM05D006153 ORTHO05D007701 7.7e-08 60.8 47 53.2
Rhsim05G0089900 Rhododendron simsii HOM05D006153 ORTHO05D007701 7.7e-08 60.8 48 56.2
FAN15G1936 Fragaria x ananassa HOM05D006153 ORTHO05D007701 1.0e-07 60.5 72 48.6
HanXRQChr16g0514921 Helianthus annuus HOM05D006153 ORTHO05D007701 1.7e-07 59.7 78 37.2
Lj5g0024415 Lotus japonicus HOM05D006153 ORTHO05D007701 1.7e-07 59.7 103 38.8
CANSAT25G0942 Cannabis sativa HOM05D006153 ORTHO05D007701 2.2e-07 59.3 43 58.1
Medtr5g005180 Medicago truncatula HOM05D006153 ORTHO05D007701 2.2e-07 59.3 38 60.5
GSVIVG01037873001 Vitis vinifera HOM05D006153 ORTHO05D007701 2.2e-07 59.3 90 37.8
CsaV3_7G007950 Cucumis sativus L. HOM05D006153 ORTHO05D007701 2.9e-07 58.9 47 51.1
Lj5g0020623 Lotus japonicus HOM05D006153 ORTHO05D007701 3.8e-07 58.5 104 31.7
GSVIVG01037872001 Vitis vinifera HOM05D006153 ORTHO05D007701 5.0e-07 58.2 42 54.8
Hma1.2p1_1174F.1_g263880 Hydrangea macrophylla HOM05D006153 ORTHO05D007701 6.5e-07 57.8 98 36.7
Os12g0507700 Oryza sativa ssp. japonica HOM05D006153 ORTHO05D007701 6.5e-07 57.8 49 55.1
Ciclev10029838m.g Citrus clementina HOM05D006153 ORTHO05D007701 1.1e-06 57.0 73 41.1
Psat4g228040 Pisum sativum HOM05D006153 ORTHO05D007701 1.4e-06 56.6 38 57.9
Eucgr.G01281 Eucalyptus grandis HOM05D006153 ORTHO05D007701 2.5e-06 55.8 105 30.5
Zm00001eb138020 Zea mays HOM05D006153 ORTHO05D007701 2.5e-06 55.8 39 59.0
Aqoxy6G02752 Aquilegia oxysepala HOM05D006153 ORTHO05D007701 3.2e-06 55.5 39 59.0
ECA234G3366 Erigeron canadensis HOM05D006153 ORTHO05D007701 3.2e-06 55.5 79 39.2
PGSC0003DMG400025850 Solanum tuberosum HOM05D006153 ORTHO05D007701 3.2e-06 55.5 50 48.0


User provided reference genes

Program Settings