Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold624G53235 Striga asiatica HOM05D022778 ORTHO05D000233 7.6e-55 216.9 104 100.0
SGA_v2.0_scaffold203G41561 Striga asiatica HOM05D022778 ORTHO05D000233 8.1e-49 196.8 107 89.7
SGA_v2.0_scaffold61G21245 Striga asiatica HOM05D000036 ORTHO05D010104 1.2e-47 193.0 107 88.8
SGA_v2.0_scaffold177G39442 Striga asiatica HOM05D007793 ORTHO05D000233 6.0e-44 180.6 86 100.0
Phvul.001G089000 Phaseolus vulgaris HOM05D007793 ORTHO05D010104 2.2e-14 82.4 73 56.2
TPR.G11532 Trifolium pratense HOM05D007793 ORTHO05D010104 2.2e-14 82.4 97 45.4
Phvul.011G125600 Phaseolus vulgaris HOM05D007793 ORTHO05D010104 2.9e-14 82.0 73 56.2
TPR.G11501 Trifolium pratense HOM05D007793 ORTHO05D010104 3.8e-14 81.6 102 42.2
Medtr2g092960 Medicago truncatula HOM05D007793 ORTHO05D010104 1.9e-13 79.3 98 41.8
VMungo0647G0191 Vigna mungo HOM05D007793 ORTHO05D010104 2.5e-13 79.0 73 53.4
SGA_v2.0_scaffold18G08286 Striga asiatica HOM05D022778 ORTHO05D010104 1.6e-12 76.3 85 45.9
TPR.G7307 Trifolium pratense HOM05D007793 ORTHO05D000233 2.1e-12 75.9 101 33.7
VMungo0464G1009 Vigna mungo HOM05D007793 ORTHO05D010104 7.9e-12 73.9 74 51.4
VMungo1215G0329 Vigna mungo HOM05D007793 ORTHO05D010104 7.9e-12 73.9 73 50.7
Duzib084G0418 Durio zibethinus HOM05D000539 ORTHO05D000233 6.7e-11 70.9 97 38.1
RcHm_v2.0_Chr5g0079551 Rosa chinensis HOM05D000539 ORTHO05D000233 6.7e-11 70.9 89 38.2
Medtr2g037270 Medicago truncatula HOM05D007793 ORTHO05D010104 8.8e-11 70.5 99 32.3
Medtr3g011560 Medicago truncatula HOM05D007793 ORTHO05D010104 8.8e-11 70.5 99 32.3
Medtr8g017000 Medicago truncatula HOM05D007793 ORTHO05D010104 8.8e-11 70.5 99 32.3
VMungo0251G1369 Vigna mungo HOM05D007793 ORTHO05D010104 8.8e-11 70.5 68 47.1
FvH4_3g14251 Fragaria vesca HOM05D000539 ORTHO05D000233 4.3e-10 68.2 88 38.6
RcHm_v2.0_Chr1g0329531 Rosa chinensis HOM05D000539 ORTHO05D000233 5.7e-10 67.8 87 37.9
FvH4_1g28483 Fragaria vesca HOM05D000539 ORTHO05D000233 7.4e-10 67.4 88 38.6
FvH4_2g21272 Fragaria vesca HOM05D000539 ORTHO05D000233 7.4e-10 67.4 88 38.6
FvH4_1g20121 Fragaria vesca HOM05D000539 ORTHO05D000233 9.7e-10 67.0 88 36.4
FvH4_1g25001 Fragaria vesca HOM05D000539 ORTHO05D000233 1.3e-09 66.6 88 37.5
FvH4_6g12902 Fragaria vesca HOM05D000539 ORTHO05D000233 1.7e-09 66.2 88 37.5
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 1.7e-09 66.2 89 37.1
RcHm_v2.0_Chr4g0401831 Rosa chinensis HOM05D000539 ORTHO05D000233 4.8e-09 64.7 92 39.1
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-08 63.5 90 36.7
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 1.4e-08 63.2 88 35.2
CANSAT25G0318 Cannabis sativa HOM05D007314 ORTHO05D010380 1.8e-08 62.8 95 33.7
FvH4_4g15803 Fragaria vesca HOM05D000539 ORTHO05D000233 1.8e-08 62.8 78 39.7
FAN15G1280 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.8e-08 62.8 90 36.7
MBI08_g00251_MAGBIO Magnolia biondii HOM05D008572 ORTHO05D004199 2.4e-08 62.4 85 36.5
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 2.4e-08 62.4 88 34.1
SGA_v2.0_scaffold277G46711 Striga asiatica HOM05D012899 ORTHO05D000233 3.1e-08 62.0 69 46.4
FvH4_3g23522 Fragaria vesca HOM05D000539 ORTHO05D000233 4.1e-08 61.6 78 38.5
FvH4_6g31293 Fragaria vesca HOM05D000539 ORTHO05D000233 4.1e-08 61.6 78 38.5
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.1e-08 61.6 90 35.6
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.1e-08 61.6 90 35.6
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.1e-08 61.6 90 35.6
FAN28G1622 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.1e-08 61.6 90 35.6
RcHm_v2.0_Chr2g0095191 Rosa chinensis HOM05D000107 ORTHO05D000062 4.1e-08 61.6 89 32.6
RcHm_v2.0_Chr2g0123111 Rosa chinensis HOM05D000539 ORTHO05D000233 4.1e-08 61.6 89 31.5
MBI01_g06508_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D010248 6.9e-08 60.8 75 32.0
MBI01_g41484_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D010248 6.9e-08 60.8 75 32.0
RcHm_v2.0_Chr4g0393861 Rosa chinensis HOM05D000539 ORTHO05D000233 6.9e-08 60.8 88 33.0
FvH4_6g32742 Fragaria vesca HOM05D000539 ORTHO05D000233 9.1e-08 60.5 76 39.5
MBI10_g08041_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D004199 9.1e-08 60.5 85 35.3
FvH4_2g07752 Fragaria vesca HOM05D000539 ORTHO05D000233 1.2e-07 60.1 85 36.5
FvH4_4g16571 Fragaria vesca HOM05D000539 ORTHO05D000233 1.2e-07 60.1 92 37.0
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.2e-07 60.1 90 35.6
FAN25G0088 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.2e-07 60.1 90 35.6
SGA_v2.0_scaffold214G42295 Striga asiatica HOM05D012899 ORTHO05D013633 1.2e-07 60.1 69 44.9
CANSAT11G2450 Cannabis sativa HOM05D013932 ORTHO05D011884 1.5e-07 59.7 97 32.0
FvH4_4g10052 Fragaria vesca HOM05D000539 ORTHO05D000233 1.5e-07 59.7 77 37.7
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 1.5e-07 59.7 103 33.0
FvH4_3g19213 Fragaria vesca HOM05D000539 ORTHO05D000233 2.0e-07 59.3 77 37.7
FvH4_3g31713 Fragaria vesca HOM05D000539 ORTHO05D000233 2.0e-07 59.3 77 37.7
FAN18G3492 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.0e-07 59.3 90 35.6
Psat5g276440 Pisum sativum HOM05D007793 ORTHO05D000636 2.6e-07 58.9 81 34.6
RcHm_v2.0_Chr6g0271081 Rosa chinensis HOM05D000539 ORTHO05D000233 2.6e-07 58.9 89 33.7
FvH4_5g20921 Fragaria vesca HOM05D000539 ORTHO05D000233 3.4e-07 58.5 90 35.6
FvH4_6g23351 Fragaria vesca HOM05D000539 ORTHO05D000233 3.4e-07 58.5 77 37.7
MBI15_g06453_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D004199 3.4e-07 58.5 85 34.1
RcHm_v2.0_Chr1g0340601 Rosa chinensis HOM05D000539 ORTHO05D000233 3.4e-07 58.5 85 34.1
RcHm_v2.0_Chr5g0072981 Rosa chinensis HOM05D000539 ORTHO05D000233 3.4e-07 58.5 90 32.2
CANSAT54G2622 Cannabis sativa HOM05D000539 ORTHO05D000233 5.9e-07 57.8 97 32.0
TPR.G29967 Trifolium pratense HOM05D007793 ORTHO05D000233 7.7e-07 57.4 109 35.8
RcHm_v2.0_Chr2g0102081 Rosa chinensis HOM05D000539 ORTHO05D000233 1.0e-06 57.0 88 33.0
RcHm_v2.0_Chr2g0108861 Rosa chinensis HOM05D000539 ORTHO05D000233 1.0e-06 57.0 66 39.4
TPR.G30789 Trifolium pratense HOM05D007793 ORTHO05D000233 1.3e-06 56.6 99 35.4
ECA236G2459 Erigeron canadensis HOM05D009001 ORTHO05D011396 1.7e-06 56.2 102 26.5
FvH4_3g26442 Fragaria vesca HOM05D000539 ORTHO05D000233 1.7e-06 56.2 90 34.4
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.7e-06 56.2 93 33.3
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.7e-06 56.2 93 33.3
RcHm_v2.0_Chr3g0462471 Rosa chinensis HOM05D000539 ORTHO05D000233 1.7e-06 56.2 88 34.1
RcHm_v2.0_Chr7g0191841 Rosa chinensis HOM05D000539 ORTHO05D000233 1.7e-06 56.2 89 33.7
RcHm_v2.0_Chr7g0196691 Rosa chinensis HOM05D000539 ORTHO05D000233 1.7e-06 56.2 89 33.7
ECA236G1401 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.2e-06 55.8 77 31.2
MBI16_g26158_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D010248 2.2e-06 55.8 75 29.3
FAN09G4072 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.9e-06 55.5 67 38.8
Ciclev10023988m.g Citrus clementina HOM05D000616 ORTHO05D000233 5.0e-06 54.7 96 30.2
RcHm_v2.0_Chr5g0082411 Rosa chinensis HOM05D000539 ORTHO05D000233 5.0e-06 54.7 88 34.1
RcHm_v2.0_Chr1g0352301 Rosa chinensis HOM05D000539 ORTHO05D000233 6.5e-06 54.3 94 33.0
FvH4_4g09772 Fragaria vesca HOM05D000539 ORTHO05D000233 8.5e-06 53.9 86 34.9
FvH4_4g10363 Fragaria vesca HOM05D008321 ORTHO05D003768 8.5e-06 53.9 96 30.2
FvH4_6g12431 Fragaria vesca HOM05D000539 ORTHO05D000233 8.5e-06 53.9 77 37.7


User provided reference genes

Program Settings