Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold621G53225 Striga asiatica HOM05D011630 ORTHO05D014269 1.3e-64 249.6 125 100.0
SGA_v2.0_scaffold2G00884 Striga asiatica HOM05D011630 ORTHO05D014269 6.9e-63 243.8 125 98.4
SGA_v2.0_scaffold53G19282 Striga asiatica HOM05D011630 ORTHO05D014269 6.9e-63 243.8 125 98.4
SGA_v2.0_scaffold354G49733 Striga asiatica HOM05D011630 ORTHO05D014269 1.5e-62 242.7 125 97.6
SGA_v2.0_scaffold217G42455 Striga asiatica HOM05D011630 ORTHO05D014269 8.5e-61 236.9 125 95.2
SGA_v2.0_scaffold263G45986 Striga asiatica HOM05D011630 ORTHO05D014269 8.5e-61 236.9 125 95.2
SGA_v2.0_scaffold22G09678 Striga asiatica HOM05D011630 ORTHO05D014269 4.2e-60 234.6 125 94.4
SGA_v2.0_scaffold203G41556 Striga asiatica HOM05D011630 ORTHO05D014269 9.4e-60 233.4 125 94.4
SGA_v2.0_scaffold30G12367 Striga asiatica HOM05D011630 ORTHO05D014269 2.6e-57 225.3 125 91.2
SGA_v2.0_scaffold366G50026 Striga asiatica HOM05D011630 ORTHO05D014269 4.7e-51 204.5 110 91.8
SGA_v2.0_scaffold30G12563 Striga asiatica HOM05D011630 ORTHO05D002863 7.8e-22 107.5 69 82.6
SGA_v2.0_scaffold38G14998 Striga asiatica HOM05D011630 ORTHO05D014269 1.0e-13 80.5 98 46.9
SGA_v2.0_scaffold211G42175 Striga asiatica HOM05D011630 ORTHO05D014269 2.3e-13 79.3 63 54.0
SGA_v2.0_scaffold199G41207 Striga asiatica HOM05D011630 ORTHO05D014269 2.5e-12 75.9 63 54.0
SGA_v2.0_scaffold150G36678 Striga asiatica HOM05D011630 ORTHO05D014269 2.6e-09 65.9 63 47.6
SGA_v2.0_scaffold3G01575 Striga asiatica HOM05D011630 ORTHO05D014269 4.4e-09 65.1 103 38.8
Lj3P1024T39 Lonicera japonica HOM05D008126 ORTHO05D000309 6.4e-08 61.2 119 32.8
SGA_v2.0_scaffold14G06948 Striga asiatica HOM05D001383 ORTHO05D000309 2.4e-07 59.3 45 51.1
CAN.G1459.18 Capsicum annuum HOM05D009408 ORTHO05D000309 4.1e-07 58.5 60 50.0
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 7.1e-07 57.8 60 41.7
CAN.G1801.2 Capsicum annuum HOM05D009408 ORTHO05D000309 1.2e-06 57.0 48 54.2
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-06 57.0 54 44.4
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-06 57.0 54 44.4
SGA_v2.0_scaffold8G04646 Striga asiatica HOM05D000134 ORTHO05D000168 1.2e-06 57.0 46 58.7
Lj1P904T2 Lonicera japonica HOM05D008126 ORTHO05D000309 1.6e-06 56.6 54 44.4
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.6e-06 56.6 60 41.7
SGA_v2.0_scaffold12G06209 Striga asiatica HOM05D000403 ORTHO05D000350 1.6e-06 56.6 52 53.8
Solyc10g055427.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 2.1e-06 56.2 126 34.1
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-06 55.8 60 41.7
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-06 55.8 57 43.9
Solyc09g072730.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 2.7e-06 55.8 126 34.1
COL.COLO4_10433 Corchorus olitorius HOM05D023691 ORTHO05D000309 6.0e-06 54.7 52 42.3
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 6.0e-06 54.7 60 40.0
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 6.0e-06 54.7 60 41.7
SGA_v2.0_scaffold156G37257 Striga asiatica HOM05D035478 ORTHO05D000309 6.0e-06 54.7 90 34.4
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 6.0e-06 54.7 44 54.5
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 7.8e-06 54.3 76 36.8
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 7.8e-06 54.3 76 36.8
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 7.8e-06 54.3 79 36.7
Lj7P267T11 Lonicera japonica HOM05D008126 ORTHO05D000309 7.8e-06 54.3 84 38.1
Peaxi162Scf00562g00026 Petunia axillaris HOM05D004040 ORTHO05D000309 7.8e-06 54.3 41 53.7
SGA_v2.0_scaffold670G53420 Striga asiatica HOM05D001383 ORTHO05D000309 7.8e-06 54.3 41 48.8


User provided reference genes

Program Settings