Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold61G21266 Striga asiatica HOM05D004887 ORTHO05D006168 4.8e-208 727.6 377 100.0
Migut.G01142 Erythranthe guttata HOM05D004887 ORTHO05D006168 1.6e-147 526.6 328 82.9
Migut.D02114 Erythranthe guttata HOM05D004887 ORTHO05D006168 4.7e-147 525.0 328 82.6
Migut.G01105 Erythranthe guttata HOM05D004887 ORTHO05D006168 4.7e-147 525.0 328 82.6
Migut.N02667 Erythranthe guttata HOM05D004887 ORTHO05D006168 3.1e-138 495.7 346 74.6
Oeu041027.1 Olea europaea HOM05D004887 ORTHO05D006168 8.3e-136 487.6 335 76.4
Solyc11g073300.2 Solanum lycopersicum HOM05D004887 ORTHO05D006168 2.7e-134 482.6 340 74.7
Sopen11g030920 Solanum pennellii HOM05D004887 ORTHO05D006168 2.7e-134 482.6 340 74.4
Dinv32870 Davidia involucrata HOM05D004887 ORTHO05D006168 6.0e-134 481.5 328 77.1
MSTRG.17840 Avicennia marina HOM05D004887 ORTHO05D006168 5.1e-133 478.4 346 73.4
Hma1.2p1_0624F.1_g191380 Hydrangea macrophylla HOM05D004887 ORTHO05D006168 1.9e-132 476.5 347 73.8
CAN.G661.4 Capsicum annuum HOM05D004887 ORTHO05D006168 3.3e-132 475.7 336 73.8
unitig_899.g14894 Utricularia gibba HOM05D004887 ORTHO05D006168 9.5e-132 474.2 308 76.0
Nitab4.5_0000610g0150 Nicotiana tabacum HOM05D004887 ORTHO05D006168 2.8e-131 472.6 340 73.2
Ciclev10028710m.g Citrus clementina HOM05D004887 ORTHO05D006168 8.1e-131 471.1 333 73.6
SalBow3G3342 Salvia bowleyana HOM05D004887 ORTHO05D006168 1.2e-129 467.2 344 71.2
MD03G1097100 Malus domestica HOM05D004887 ORTHO05D006168 9.9e-129 464.2 325 74.8
Atru.chr3.3838 Acer truncatum HOM05D004887 ORTHO05D006168 3.7e-128 462.2 299 80.3
COL.COLO4_18471 Corchorus olitorius HOM05D004887 ORTHO05D006168 3.7e-128 462.2 326 74.5
PGR102G2111 Punica granatum HOM05D004887 ORTHO05D006168 3.7e-128 462.2 326 74.2
MD11G1143700 Malus domestica HOM05D004887 ORTHO05D006168 4.9e-128 461.8 353 71.1
QL01p032955 Quercus lobata HOM05D004887 ORTHO05D006168 4.9e-128 461.8 339 72.6
Cpa.g.sc190.13 Carica papaya HOM05D004887 ORTHO05D006168 1.4e-127 460.3 327 73.4
Gohir.D03G128400 Gossypium hirsutum HOM05D004887 ORTHO05D006168 1.9e-127 459.9 326 73.0
Prupe.6G081500 Prunus persica HOM05D004887 ORTHO05D006168 2.4e-127 459.5 325 73.2
Cc01_g12500 Coffea canephora HOM05D004887 ORTHO05D006168 3.2e-127 459.1 299 79.6
Cfa011464 Carpinus fangiana HOM05D004887 ORTHO05D006168 5.4e-127 458.4 343 71.1
Medtr4g063570 Medicago truncatula HOM05D004887 ORTHO05D006168 1.2e-126 457.2 330 72.1
DCAR_018895 Daucus carota HOM05D004887 ORTHO05D006168 1.6e-126 456.8 329 72.3
Gohir.A03G039700 Gossypium hirsutum HOM05D004887 ORTHO05D006168 1.6e-126 456.8 326 72.7
Gorai.003G135100 Gossypium raimondii HOM05D004887 ORTHO05D006168 2.7e-126 456.1 326 72.4
TPR.G10217 Trifolium pratense HOM05D004887 ORTHO05D006168 3.5e-126 455.7 327 73.1
Potri.001G237000 Populus trichocarpa HOM05D004887 ORTHO05D006168 1.3e-125 453.8 327 73.1
Haze_24049 Corylus avellana HOM05D004887 ORTHO05D006168 3.0e-125 452.6 343 70.6
Manes.11G133000 Manihot esculenta HOM05D004887 ORTHO05D006168 5.1e-125 451.8 353 68.0
FAN11G2539 Fragaria x ananassa HOM05D004887 ORTHO05D006168 6.6e-125 451.4 378 66.7
GSVIVG01025008001 Vitis vinifera HOM05D004887 ORTHO05D006168 1.1e-124 450.7 336 71.1
Actinidia37217 Actinidia chinensis HOM05D004887 ORTHO05D006168 1.5e-124 450.3 363 68.9
Glyma.11G141400 Glycine max HOM05D004887 ORTHO05D006168 1.5e-124 450.3 345 69.6
Duzib150G1309 Durio zibethinus HOM05D004887 ORTHO05D006168 1.9e-124 449.9 298 77.5
Lj3g0008400 Lotus japonicus HOM05D004887 ORTHO05D006168 1.9e-124 449.9 322 72.7
AT5G59960 Arabidopsis thaliana HOM05D004887 ORTHO05D006168 3.3e-124 449.1 328 71.0
arahy.Tifrunner.gnm1.ann1.1V42NR Arachis hypogaea HOM05D004887 ORTHO05D006168 5.6e-124 448.4 322 72.0
arahy.Tifrunner.gnm1.ann1.31UC9J Arachis hypogaea HOM05D004887 ORTHO05D006168 5.6e-124 448.4 322 72.0
Lalb_Chr01g0003761 Lupinus albus HOM05D004887 ORTHO05D006168 9.6e-124 447.6 324 72.5
FAN21G1310 Fragaria x ananassa HOM05D004887 ORTHO05D006168 1.2e-123 447.2 330 72.1
VMungo1127G0043 Vigna mungo HOM05D004887 ORTHO05D006168 1.2e-123 447.2 327 71.6
Eucgr.B02388 Eucalyptus grandis HOM05D004887 ORTHO05D006168 1.6e-123 446.8 347 70.0
FvH4_3g35470 Fragaria vesca HOM05D004887 ORTHO05D006168 1.6e-123 446.8 330 72.1
RcHm_v2.0_Chr5g0063631 Rosa chinensis HOM05D004887 ORTHO05D006168 1.6e-123 446.8 331 72.5
AL8G36530 Arabidopsis lyrata HOM05D004887 ORTHO05D006168 2.1e-123 446.4 305 74.4
Thhalv10013947m.g Eutrema salsugineum HOM05D004887 ORTHO05D006168 3.6e-123 445.7 343 68.2
FAN25G2556 Fragaria x ananassa HOM05D004887 ORTHO05D006168 4.7e-123 445.3 378 65.9
BcaC04g19652 Brassica carinata HOM05D004887 ORTHO05D006168 8.1e-123 444.5 324 69.4
C09p52470 Brassica napus HOM05D004887 ORTHO05D006168 8.1e-123 444.5 324 69.4
BolC9t58114H Brassica oleracea HOM05D004887 ORTHO05D006168 8.1e-123 444.5 324 69.4
BraA10t43799Z Brassica rapa HOM05D004887 ORTHO05D006168 8.1e-123 444.5 324 69.4
AL781U10010 Arabidopsis lyrata HOM05D004887 ORTHO05D006168 1.1e-122 444.1 322 71.4
Phvul.011G065900 Phaseolus vulgaris HOM05D004887 ORTHO05D006168 1.4e-122 443.7 345 68.4
Sp6g21640 Schrenkiella parvula HOM05D004887 ORTHO05D006168 2.4e-122 443.0 324 69.1
A10p17180 Brassica napus HOM05D004887 ORTHO05D006168 3.1e-122 442.6 324 69.1
CANSAT54G1644 Cannabis sativa HOM05D004887 ORTHO05D006168 4.0e-122 442.2 341 69.8
MBI14_g18541_MAGBIO Magnolia biondii HOM05D004887 ORTHO05D006168 5.2e-122 441.8 338 70.1
THA.LOC104799466 Tarenaya hassleriana HOM05D004887 ORTHO05D006168 5.2e-122 441.8 325 70.2
HanXRQChr04g0107001 Helianthus annuus HOM05D004887 ORTHO05D006168 6.8e-122 441.4 332 70.5
BcaB08g36206 Brassica carinata HOM05D004887 ORTHO05D006168 8.9e-122 441.0 324 68.8
Potri.009G028500 Populus trichocarpa HOM05D004887 ORTHO05D006168 8.9e-122 441.0 347 68.3
Hund18927 Selenicereus undatus HOM05D004887 ORTHO05D006168 2.6e-121 439.5 329 69.9
Lsat_1_v5_gn_9_22360 Lactuca sativa HOM05D004887 ORTHO05D006168 7.6e-121 438.0 336 69.0
Glyma.12G064800 Glycine max HOM05D004887 ORTHO05D006168 9.9e-121 437.6 327 70.9
Lsat_1_v5_gn_8_77921 Lactuca sativa HOM05D004887 ORTHO05D006168 1.3e-120 437.2 327 69.4
ECA247G3571 Erigeron canadensis HOM05D004887 ORTHO05D006168 1.7e-120 436.8 345 67.8
A03p11380 Brassica napus HOM05D004887 ORTHO05D006168 6.4e-120 434.9 325 69.5
Manes.04G032300 Manihot esculenta HOM05D004887 ORTHO05D006168 6.4e-120 434.9 326 70.2
Aqoxy4G02983 Aquilegia oxysepala HOM05D004887 ORTHO05D006168 8.4e-120 434.5 336 68.8
HanXRQChr06g0175771 Helianthus annuus HOM05D004887 ORTHO05D006168 1.1e-119 434.1 328 70.1
Peaxi162Scf00406g00137 Petunia axillaris HOM05D004887 ORTHO05D006168 1.9e-119 433.3 340 67.9
Gorai.004G004400 Gossypium raimondii HOM05D004887 ORTHO05D006168 4.2e-119 432.2 321 68.8
CsaV3_1G033620 Cucumis sativus L. HOM05D004887 ORTHO05D006168 1.2e-118 430.6 349 65.6
TAR369G0226 Trochodendron aralioides HOM05D004887 ORTHO05D006168 1.2e-118 430.6 301 73.4
Gohir.D08G010900 Gossypium hirsutum HOM05D004887 ORTHO05D006168 1.6e-118 430.3 321 68.5
THA.LOC104810819 Tarenaya hassleriana HOM05D004887 ORTHO05D006168 2.3e-117 426.4 299 72.6
CiPaw.13G097700 Carya illinoinensis HOM05D004887 ORTHO05D006168 3.9e-117 425.6 353 67.1
Aa31LG1G12090 Aethionema arabicum HOM05D004887 ORTHO05D006168 6.6e-117 424.9 346 66.2
Duzib168G0637 Durio zibethinus HOM05D004887 ORTHO05D006168 1.1e-116 424.1 322 70.2
PSO384G2944 Papaver somniferum HOM05D004887 ORTHO05D006168 2.5e-116 422.9 341 65.4
Nitab4.5_0003782g0060 Nicotiana tabacum HOM05D004887 ORTHO05D006168 7.3e-116 421.4 340 67.6
Nn2g12934 Nelumbo nucifera HOM05D004887 ORTHO05D006168 3.6e-115 419.1 330 69.4
PSO339G5095 Papaver somniferum HOM05D004887 ORTHO05D006168 8.1e-115 417.9 341 63.9
AUR62009609 Chenopodium quinoa HOM05D004887 ORTHO05D006168 2.4e-114 416.4 301 71.1
EL10Ac7g15978 Beta vulgaris HOM05D004887 ORTHO05D006168 5.3e-114 415.2 329 65.3
AUR62001822 Chenopodium quinoa HOM05D004887 ORTHO05D006168 9.0e-114 414.5 303 70.6
arahy.Tifrunner.gnm1.ann1.LTG2DU Arachis hypogaea HOM05D004887 ORTHO05D006168 7.6e-113 411.4 343 64.4
ClCG03G001950 Citrullus lanatus HOM05D004887 ORTHO05D006168 1.3e-112 410.6 375 60.8
Sc21g0005570 Simmondsia chinensis HOM05D004887 ORTHO05D006168 6.4e-112 408.3 341 64.5
ATR0559G318 Amborella trichopoda HOM05D004887 ORTHO05D006168 8.4e-112 407.9 305 68.9
CSS0023093 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 1.2e-110 404.1 325 68.9
HPP92_015526 Vanilla planifolia HOM05D004887 ORTHO05D006168 6.0e-110 401.7 348 63.5
Lj1A157T41 Lonicera japonica HOM05D004887 ORTHO05D006168 3.0e-109 399.4 310 68.7
Psat7g218040 Pisum sativum HOM05D004887 ORTHO05D006168 2.8e-107 392.9 286 70.3
Os01g0151600 Oryza sativa ssp. japonica HOM05D004887 ORTHO05D006168 2.4e-106 389.8 322 62.7
CSS0048955 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 1.2e-105 387.5 337 65.0
Zm00001eb124290 Zea mays HOM05D004887 ORTHO05D006168 5.8e-105 385.2 328 60.7
CDE07G1169 Ceratophyllum demersum HOM05D004887 ORTHO05D006168 4.9e-104 382.1 292 68.5
Psat7g217880 Pisum sativum HOM05D004887 ORTHO05D006168 1.1e-103 380.9 349 62.8
Actinidia07046 Actinidia chinensis HOM05D004887 ORTHO05D006168 1.4e-103 380.6 255 77.3
TWI79G0894 Tripterygium wilfordii HOM05D004887 ORTHO05D006168 1.9e-103 380.2 292 67.1
Rhsim13G0085300 Rhododendron simsii HOM05D001446 ORTHO05D001360 3.5e-102 375.9 373 57.4
Sabra16G0142900 Salix brachista HOM05D001446 ORTHO05D001360 1.0e-101 374.4 386 56.5
FAN16G2077 Fragaria x ananassa HOM05D001446 ORTHO05D001360 5.1e-101 372.1 278 71.2
Dinv03548 Davidia involucrata HOM05D004887 ORTHO05D006168 1.5e-100 370.5 234 81.6
Thecc.09G325700 Theobroma cacao HOM05D004887 ORTHO05D006168 3.3e-100 369.4 249 77.5
arahy.Tifrunner.gnm1.ann1.RHUE9Y Arachis hypogaea HOM05D004887 ORTHO05D006168 4.3e-100 369.0 294 65.6
MELO3C020709.2 Cucumis melo HOM05D004887 ORTHO05D006168 4.0e-98 362.5 293 63.8
Duzib170G0837 Durio zibethinus HOM05D004887 ORTHO05D006168 9.0e-98 361.3 340 59.7
Ca_19183_v3 Cicer arietinum L. HOM05D004887 ORTHO05D006168 2.0e-97 360.1 252 74.6
TAR623G0510 Trochodendron aralioides HOM05D004887 ORTHO05D006168 1.7e-96 357.1 256 73.8
vmacro03096 Vaccinium macrocarpon HOM05D004887 ORTHO05D006168 4.9e-96 355.5 367 56.7
Sed0009981 Sechium edule HOM05D004887 ORTHO05D006168 2.1e-94 350.1 290 63.1
SalBow2G3032 Salvia bowleyana HOM05D004887 ORTHO05D006168 5.1e-93 345.5 272 68.0
Carub.0008s2049 Capsella rubella HOM05D004887 ORTHO05D006168 6.3e-91 338.6 230 74.3
BraA03t10452Z Brassica rapa HOM05D004887 ORTHO05D006168 4.1e-90 335.9 230 73.0
Mapoly0001s0555 Marchantia polymorpha HOM05D004887 ORTHO05D006168 2.5e-87 326.6 298 55.0
Pp3c8_24390 Physcomitrium patens HOM05D004887 ORTHO05D006168 2.5e-87 326.6 302 55.3
SMO118G0033 Selaginella moellendorffii HOM05D004887 ORTHO05D006168 2.1e-86 323.6 300 55.0
Pp3c24_20310 Physcomitrium patens HOM05D004887 ORTHO05D006168 4.6e-86 322.4 301 55.1
Nn2g10420 Nelumbo nucifera HOM05D004887 ORTHO05D006168 8.2e-83 311.6 226 70.8
TWI31G1179 Tripterygium wilfordii HOM05D004887 ORTHO05D006168 5.5e-79 298.9 342 51.8
Gohir.A08G000181 Gossypium hirsutum HOM05D004887 ORTHO05D006168 2.7e-78 296.6 226 66.8
Lj2C1057T15 Lonicera japonica HOM05D004887 ORTHO05D006168 4.6e-78 295.8 209 72.7
Psat7g218000 Pisum sativum HOM05D004887 ORTHO05D006168 3.3e-76 289.7 194 74.7
AagrBONN_evm.TU.Sc2ySwM_344.5355 Anthoceros agrestis HOM05D004887 ORTHO05D006168 4.8e-75 285.8 239 56.9
CBR_g46654 Chara braunii HOM05D004887 ORTHO05D006168 2.3e-69 266.9 290 47.2
PSO384G0451 Papaver somniferum HOM05D004887 ORTHO05D006168 7.0e-58 228.8 199 61.3
CARHR273590 Cardamine hirsuta HOM05D004887 ORTHO05D006168 5.9e-57 225.7 166 70.5
CARHR273600 Cardamine hirsuta HOM05D004887 ORTHO05D006168 1.1e-55 221.5 160 71.9
Sabra09G0019700 Salix brachista HOM05D004887 ORTHO05D006168 1.4e-45 188.0 171 61.4
Nitab4.5_0000610g0050 Nicotiana tabacum HOM05D004887 ORTHO05D006168 2.0e-36 157.5 356 36.2
Duzib205G1865 Durio zibethinus HOM05D004887 ORTHO05D006168 1.7e-24 117.9 136 52.9
C03p13130 Brassica napus HOM05D004887 ORTHO05D006168 1.3e-19 101.7 94 59.6
Lj1A771T11 Lonicera japonica HOM05D004887 ORTHO05D234499 2.3e-08 64.3 35 85.7
HanXRQChr07g0192801 Helianthus annuus HOM05D004887 ORTHO05D225384 1.9e-07 61.2 51 60.8
HanXRQChr05g0134321 Helianthus annuus HOM05D004887 ORTHO05D025733 8.1e-06 55.8 46 56.5


User provided reference genes

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