Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold61G21232 Striga asiatica HOM05D005647 ORTHO05D006968 0.0e+00 1343.9 683 100.0
MSTRG.21166 Avicennia marina HOM05D005647 ORTHO05D006968 4.9e-203 711.8 696 58.6
Migut.D02155 Erythranthe guttata HOM05D005647 ORTHO05D006968 1.1e-162 577.8 691 52.4
SalBow3G1239 Salvia bowleyana HOM05D005647 ORTHO05D006968 3.8e-155 552.7 697 47.8
SalBow3G2669 Salvia bowleyana HOM05D005647 ORTHO05D006968 1.1e-154 551.2 697 47.8
Cc01_g12040 Coffea canephora HOM05D005647 ORTHO05D006968 1.6e-137 494.2 716 43.7
Oeu058515.3 Olea europaea HOM05D005647 ORTHO05D006968 1.4e-136 491.1 815 41.6
Actinidia00810 Actinidia chinensis HOM05D005647 ORTHO05D006968 2.3e-131 473.8 708 43.2
Sopen06g001190 Solanum pennellii HOM05D005647 ORTHO05D006968 2.9e-131 473.4 342 70.2
PGSC0003DMG400033668 Solanum tuberosum HOM05D005647 ORTHO05D006968 6.6e-131 472.2 344 69.8
Lj1A178T39 Lonicera japonica HOM05D005647 ORTHO05D006968 1.5e-130 471.1 368 65.5
Nitab4.5_0008854g0020 Nicotiana tabacum HOM05D005647 ORTHO05D006968 1.5e-130 471.1 708 43.4
Solyc06g005200.3 Solanum lycopersicum HOM05D005647 ORTHO05D006968 1.5e-130 471.1 388 64.2
Nitab4.5_0000022g0330 Nicotiana tabacum HOM05D005647 ORTHO05D006968 4.3e-130 469.5 708 43.1
unitig_736.g22430 Utricularia gibba HOM05D005647 ORTHO05D006968 8.9e-128 461.8 714 43.8
Rhsim01G0223800 Rhododendron simsii HOM05D005647 ORTHO05D006968 4.1e-125 453.0 397 58.9
GSVIVG01025064001 Vitis vinifera HOM05D005647 ORTHO05D006968 1.9e-122 444.1 713 41.1
Gohir.A05G099200 Gossypium hirsutum HOM05D005647 ORTHO05D006968 3.3e-122 443.4 371 61.2
Gohir.D05G099100 Gossypium hirsutum HOM05D005647 ORTHO05D006968 1.2e-121 441.4 423 55.8
Gorai.009G103000 Gossypium raimondii HOM05D005647 ORTHO05D006968 3.6e-121 439.9 423 56.0
Lsat_1_v5_gn_5_167021 Lactuca sativa HOM05D005647 ORTHO05D006968 1.4e-120 438.0 399 59.4
DCAR_005295 Daucus carota HOM05D005647 ORTHO05D006968 5.8e-119 432.6 410 56.3
COL.COLO4_18417 Corchorus olitorius HOM05D005647 ORTHO05D006968 2.2e-118 430.6 347 62.5
Thecc.09G331200 Theobroma cacao HOM05D005647 ORTHO05D006968 2.9e-118 430.3 443 53.7
Hund18946 Selenicereus undatus HOM05D005647 ORTHO05D006968 7.0e-117 425.6 341 62.2
Duzib150G0770 Durio zibethinus HOM05D005647 ORTHO05D006968 7.8e-116 422.2 384 58.6
TAR623G0344 Trochodendron aralioides HOM05D005647 ORTHO05D006968 1.0e-115 421.8 525 46.3
CiPaw.13G102300 Carya illinoinensis HOM05D005647 ORTHO05D006968 1.3e-115 421.4 346 61.6
Cfa011418 Carpinus fangiana HOM05D005647 ORTHO05D006968 1.7e-115 421.0 426 52.6
Actinidia03769 Actinidia chinensis HOM05D005647 ORTHO05D006968 8.6e-115 418.7 665 42.4
EL10Ac7g15937 Beta vulgaris HOM05D005647 ORTHO05D006968 1.9e-114 417.5 393 54.5
Ah.15g096320 Amaranthus hybridus HOM05D005647 ORTHO05D006968 3.3e-114 416.8 712 39.0
QL03p069904 Quercus lobata HOM05D005647 ORTHO05D006968 2.1e-113 414.1 389 56.0
HanXRQChr14g0429211 Helianthus annuus HOM05D005647 ORTHO05D006968 4.7e-113 412.9 343 62.4
CAN.G200.2 Capsicum annuum HOM05D005647 ORTHO05D006968 8.1e-113 412.1 384 58.9
CANSAT54G2414 Cannabis sativa HOM05D005647 ORTHO05D006968 1.2e-111 408.3 343 62.4
Aa31LG1G12110 Aethionema arabicum HOM05D005647 ORTHO05D006968 3.4e-111 406.8 702 37.9
Ciclev10027867m.g Citrus clementina HOM05D005647 ORTHO05D006968 4.4e-111 406.4 346 58.1
Peaxi162Scf00006g01310 Petunia axillaris HOM05D005647 ORTHO05D006968 4.4e-111 406.4 720 39.7
ECA248G2619 Erigeron canadensis HOM05D005647 ORTHO05D006968 7.5e-111 405.6 349 60.7
Glyma.13G196800 Glycine max HOM05D005647 ORTHO05D006968 9.9e-111 405.2 342 59.1
RcHm_v2.0_Chr5g0062191 Rosa chinensis HOM05D005647 ORTHO05D006968 9.9e-111 405.2 358 57.8
AT5G59980 Arabidopsis thaliana HOM05D005647 ORTHO05D006968 6.4e-110 402.5 353 57.8
Lj3g0017565 Lotus japonicus HOM05D005647 ORTHO05D006968 6.4e-110 402.5 346 61.0
Sc14g0000850 Simmondsia chinensis HOM05D005647 ORTHO05D006968 1.1e-109 401.7 343 61.5
FAN11G0841 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.4e-109 401.4 355 58.6
TWI75G1819 Tripterygium wilfordii HOM05D005647 ORTHO05D006968 1.9e-109 401.0 413 50.6
AL8G36550 Arabidopsis lyrata HOM05D005647 ORTHO05D006968 2.4e-109 400.6 494 46.4
RcHm_v2.0_Chr4g0385531 Rosa chinensis HOM05D005647 ORTHO05D006968 2.4e-109 400.6 358 57.5
VMungo1080G1709 Vigna mungo HOM05D005647 ORTHO05D006968 3.2e-109 400.2 746 38.1
Carub.0004s0912 Capsella rubella HOM05D005647 ORTHO05D006968 5.4e-109 399.4 391 52.9
FvH4_3g34550 Fragaria vesca HOM05D005647 ORTHO05D006968 7.1e-109 399.1 377 56.0
FAN21G3075 Fragaria x ananassa HOM05D005647 ORTHO05D006968 7.1e-109 399.1 355 58.3
FAN25G1201 Fragaria x ananassa HOM05D005647 ORTHO05D006968 2.1e-108 397.5 361 57.6
FAN16G2614 Fragaria x ananassa HOM05D005647 ORTHO05D006968 3.5e-108 396.7 355 57.7
TPR.G17867 Trifolium pratense HOM05D005647 ORTHO05D006968 2.3e-107 394.0 342 57.9
AUR62001855 Chenopodium quinoa HOM05D005647 ORTHO05D006968 3.9e-107 393.3 340 58.2
Atru.chr3.3782 Acer truncatum HOM05D005647 ORTHO05D006968 6.6e-107 392.5 398 52.3
TPR.G11621 Trifolium pratense HOM05D005647 ORTHO05D006968 8.6e-107 392.1 340 57.6
MBI14_g34527_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 3.3e-106 390.2 340 57.1
MD11G1117900 Malus domestica HOM05D005647 ORTHO05D006968 4.3e-106 389.8 401 50.9
PSO541G4932 Papaver somniferum HOM05D005647 ORTHO05D006968 5.6e-106 389.4 342 56.7
Manes.04G028600 Manihot esculenta HOM05D005647 ORTHO05D006968 7.3e-106 389.0 436 51.6
ClCG02G020580 Citrullus lanatus HOM05D005647 ORTHO05D006968 9.5e-106 388.7 349 55.9
Medtr2g096090 Medicago truncatula HOM05D005647 ORTHO05D006968 1.6e-105 387.9 339 56.9
Phvul.L002619 Phaseolus vulgaris HOM05D005647 ORTHO05D006968 1.6e-105 387.9 339 57.2
PSO447G0260 Papaver somniferum HOM05D005647 ORTHO05D006968 2.1e-105 387.5 343 56.6
Sed0021109 Sechium edule HOM05D005647 ORTHO05D006968 2.8e-105 387.1 436 48.2
Cpa.g.sc139.4 Carica papaya HOM05D005647 ORTHO05D006968 4.7e-105 386.3 325 62.2
Lalb_Chr24g0394311 Lupinus albus HOM05D005647 ORTHO05D006968 6.2e-105 386.0 342 56.4
Potri.009G025800 Populus trichocarpa HOM05D005647 ORTHO05D006968 4.0e-104 383.3 406 51.5
Haze_23998 Corylus avellana HOM05D005647 ORTHO05D006968 5.2e-104 382.9 426 50.2
vmacro14498 Vaccinium macrocarpon HOM05D005647 ORTHO05D006968 6.8e-104 382.5 441 50.1
PGR119G0370 Punica granatum HOM05D005647 ORTHO05D006968 8.9e-104 382.1 362 55.8
Ca_01361_v3 Cicer arietinum L. HOM05D005647 ORTHO05D006968 1.5e-103 381.3 343 56.9
THA.LOC104809599 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 2.0e-103 380.9 347 55.0
Psat5g282040 Pisum sativum HOM05D005647 ORTHO05D006968 1.3e-102 378.3 342 55.6
BcaB05g22600 Brassica carinata HOM05D005647 ORTHO05D006968 6.4e-102 375.9 359 54.6
C02p11970 Brassica napus HOM05D005647 ORTHO05D006968 1.1e-101 375.2 694 37.8
BraA02t05750Z Brassica rapa HOM05D005647 ORTHO05D006968 1.1e-101 375.2 694 37.8
A02p06680 Brassica napus HOM05D005647 ORTHO05D006968 3.2e-101 373.6 695 37.3
Thhalv10012856m.g Eutrema salsugineum HOM05D005647 ORTHO05D006968 4.1e-101 373.2 349 55.0
PSO675G6613 Papaver somniferum HOM05D005647 ORTHO05D006968 3.5e-100 370.2 331 55.9
Eucgr.A02758 Eucalyptus grandis HOM05D005647 ORTHO05D006968 7.8e-100 369.0 421 47.7
MELO3C025708.2 Cucumis melo HOM05D005647 ORTHO05D006968 2.3e-99 367.5 389 50.4
BolC2t07297H Brassica oleracea HOM05D005647 ORTHO05D006968 3.9e-99 366.7 689 37.2
BcaC04g19653 Brassica carinata HOM05D005647 ORTHO05D006968 3.3e-98 363.6 355 54.9
BolC9t58115H Brassica oleracea HOM05D005647 ORTHO05D006968 3.3e-98 363.6 355 54.9
A10p17190 Brassica napus HOM05D005647 ORTHO05D006968 4.3e-98 363.2 364 53.6
Aa31LG5G21920 Aethionema arabicum HOM05D005647 ORTHO05D006968 5.6e-98 362.8 313 59.1
C09p52480 Brassica napus HOM05D005647 ORTHO05D006968 5.6e-98 362.8 355 54.9
BcaB08g36205 Brassica carinata HOM05D005647 ORTHO05D006968 9.6e-98 362.1 359 53.5
BraA10t43800Z Brassica rapa HOM05D005647 ORTHO05D006968 1.6e-97 361.3 364 53.0
Sp6g21650 Schrenkiella parvula HOM05D005647 ORTHO05D006968 1.3e-94 351.7 364 51.6
Aqoxy4G03106 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 2.9e-94 350.5 365 49.9
THA.LOC104813123 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 6.4e-94 349.4 317 55.5
Aqoxy4G03104_Aqoxy4G03103 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 4.2e-93 346.7 344 53.5
CDE08G0081 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 9.3e-93 345.5 302 57.9
Prupe.6G088000 Prunus persica HOM05D005647 ORTHO05D006968 4.6e-92 343.2 298 56.0
ATR0787G117 Amborella trichopoda HOM05D005647 ORTHO05D006968 1.3e-91 341.7 308 56.2
Sabra09G0017200 Salix brachista HOM05D005647 ORTHO05D000187 2.3e-91 340.9 736 36.3
CDE02G4018 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 5.6e-90 336.3 302 57.0
arahy.Tifrunner.gnm1.ann1.7X2355 Arachis hypogaea HOM05D005647 ORTHO05D006968 7.3e-90 335.9 343 50.7
arahy.Tifrunner.gnm1.ann1.W04KXW Arachis hypogaea HOM05D005647 ORTHO05D006968 3.4e-87 327.0 343 49.9
arahy.Tifrunner.gnm1.ann1.S4SLQI Arachis hypogaea HOM05D005647 ORTHO05D006968 9.6e-82 308.9 364 45.6
arahy.Tifrunner.gnm1.ann1.ZDAZ4C Arachis hypogaea HOM05D005647 ORTHO05D006968 5.5e-77 293.1 364 44.5
Gorai.013G129300 Gossypium raimondii HOM05D005647 ORTHO05D006968 8.2e-73 279.3 237 62.4
AUR62009649 Chenopodium quinoa HOM05D005647 ORTHO05D006968 6.5e-70 269.6 290 50.3
Nn2g13828 Nelumbo nucifera HOM05D005647 ORTHO05D006968 4.3e-66 256.9 205 61.0
Pp3c23_18130 Physcomitrium patens HOM05D005647 ORTHO05D006968 8.5e-62 242.7 291 43.6
VMungo1127G1784 Vigna mungo HOM05D005647 ORTHO05D006968 1.1e-58 232.3 310 43.9
SEGI_32841 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 1.5e-58 231.9 232 49.1
Mapoly0041s0094 Marchantia polymorpha HOM05D005647 ORTHO05D006968 3.8e-54 217.2 324 37.3
Os12g0175900 Oryza sativa ssp. japonica HOM05D005647 ORTHO05D006968 3.8e-54 217.2 309 43.4
Zm00001eb163100 Zea mays HOM05D005647 ORTHO05D006968 3.2e-53 214.2 336 42.6
CsaV3_6G022020 Cucumis sativus L. HOM05D005647 ORTHO05D006968 8.0e-44 183.0 259 43.2
Dinv32824 Davidia involucrata HOM05D005647 ORTHO05D006968 7.7e-39 166.4 468 34.8
VMungo1127G0608 Vigna mungo HOM05D005647 ORTHO05D006968 2.2e-38 164.9 235 40.4
Lsat_1_v5_gn_5_100621 Lactuca sativa HOM05D005647 ORTHO05D006968 1.5e-34 152.1 165 52.1
MBI03_g45445_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 1.6e-31 142.1 121 59.5
CARHR273620 Cardamine hirsuta HOM05D005647 ORTHO05D006968 2.9e-30 137.9 486 27.0
Aqoxy4G01384 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 1.4e-27 129.0 113 54.0
SMO348G0064 Selaginella moellendorffii HOM05D005647 ORTHO05D006968 2.4e-24 118.2 128 46.9
SEGI_06158 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 9.1e-24 116.3 120 48.3
Cre02.g088050 Chlamydomonas reinhardtii HOM05D005647 ORTHO05D006968 2.7e-23 114.8 168 34.5
EL10Ac9g22529 Beta vulgaris HOM05D005647 ORTHO05D006968 3.8e-22 110.9 86 57.0
VMungo1127G1495 Vigna mungo HOM05D005647 ORTHO05D006968 6.6e-22 110.2 163 44.2
Migut.O00549 Erythranthe guttata HOM05D005647 ORTHO05D006968 3.0e-19 101.3 366 30.3
MBI10_g46876_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 1.0e-14 86.3 80 51.2
QL03p025644 Quercus lobata HOM05D005647 ORTHO05D006968 1.3e-14 85.9 62 58.1
MCO02G042 Micromonas commoda HOM05D005647 ORTHO05D006968 2.3e-14 85.1 240 27.9
Gohir.D11G155700 Gossypium hirsutum HOM05D001229 ORTHO05D011852 8.0e-12 76.6 53 71.7
Gorai.007G165900 Gossypium raimondii HOM05D001229 ORTHO05D011852 8.0e-12 76.6 53 71.7
MBI14_g07932_MAGBIO Magnolia biondii HOM05D002922 ORTHO05D006968 1.8e-11 75.5 55 65.5


User provided reference genes

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