Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold61G21215 Striga asiatica HOM05D004534 ORTHO05D005413 3.7e-148 528.1 252 100.0
MSTRG.18620 Avicennia marina HOM05D004534 ORTHO05D005413 3.1e-110 402.1 241 77.2
Migut.D02166 Erythranthe guttata HOM05D004534 ORTHO05D005413 1.0e-105 387.1 241 77.2
unitig_37.g12680 Utricularia gibba HOM05D004534 ORTHO05D005413 1.6e-98 363.2 238 71.4
CAN.G394.3 Capsicum annuum HOM05D004534 ORTHO05D005413 1.9e-96 356.3 239 71.1
Nitab4.5_0004774g0020 Nicotiana tabacum HOM05D004534 ORTHO05D005413 4.8e-95 351.7 239 70.7
Dinv32819 Davidia involucrata HOM05D004534 ORTHO05D005413 6.2e-95 351.3 244 68.4
Solyc06g075540.3 Solanum lycopersicum HOM05D004534 ORTHO05D005413 6.2e-95 351.3 239 70.3
Peaxi162Scf00072g00025 Petunia axillaris HOM05D004534 ORTHO05D005413 5.3e-94 348.2 239 70.7
PGSC0003DMG402006611 Solanum tuberosum HOM05D004534 ORTHO05D005413 3.4e-93 345.5 239 69.5
Hma1.2p1_2042F.1_g312230 Hydrangea macrophylla HOM05D004534 ORTHO05D005413 4.5e-93 345.1 242 68.6
CSS0009646 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 2.9e-92 342.4 244 68.0
Cpa.g.sc139.34 Carica papaya HOM05D004534 ORTHO05D005413 2.9e-92 342.4 244 68.4
Nitab4.5_0000270g0130 Nicotiana tabacum HOM05D004534 ORTHO05D005413 2.9e-92 342.4 239 69.5
GSVIVG01025090001 Vitis vinifera HOM05D004534 ORTHO05D005413 1.9e-91 339.7 243 69.1
CANSAT54G1456 Cannabis sativa HOM05D004534 ORTHO05D005413 3.2e-91 339.0 245 66.1
Nn2g10612 Nelumbo nucifera HOM05D004534 ORTHO05D005413 1.6e-90 336.7 243 66.3
MD11G1120100 Malus domestica HOM05D004534 ORTHO05D005413 2.7e-90 335.9 243 67.5
Manes.11G138500 Manihot esculenta HOM05D004534 ORTHO05D005413 1.0e-89 334.0 243 67.1
Rhsim01G0222900 Rhododendron simsii HOM05D004534 ORTHO05D005413 1.8e-89 333.2 245 65.7
Cfa011397 Carpinus fangiana HOM05D004534 ORTHO05D005413 3.9e-89 332.0 243 67.9
Cc01_g11880 Coffea canephora HOM05D004534 ORTHO05D005413 3.9e-89 332.0 239 68.2
TWI31G1398 Tripterygium wilfordii HOM05D004534 ORTHO05D005413 3.9e-89 332.0 243 66.3
BcaB01g01071 Brassica carinata HOM05D004534 ORTHO05D005413 8.7e-89 330.9 238 66.4
BolC3t19273H Brassica oleracea HOM05D004534 ORTHO05D005413 1.1e-88 330.5 238 66.0
Sed0013966 Sechium edule HOM05D004534 ORTHO05D005413 1.9e-88 329.7 239 65.7
BcaC01g01956 Brassica carinata HOM05D004534 ORTHO05D005413 2.5e-88 329.3 238 66.0
C03p70180 Brassica napus HOM05D004534 ORTHO05D005413 2.5e-88 329.3 238 66.0
PGR102G1844 Punica granatum HOM05D004534 ORTHO05D005413 4.3e-88 328.6 243 67.1
A06p21280 Brassica napus HOM05D004534 ORTHO05D005413 5.6e-88 328.2 238 65.5
BraA06t25216Z Brassica rapa HOM05D004534 ORTHO05D005413 5.6e-88 328.2 238 65.5
Atru.chr3.3749 Acer truncatum HOM05D004534 ORTHO05D005413 7.4e-88 327.8 246 65.4
Ciclev10030338m.g Citrus clementina HOM05D004534 ORTHO05D005413 7.4e-88 327.8 244 66.0
QL01p035546 Quercus lobata HOM05D004534 ORTHO05D005413 9.6e-88 327.4 243 66.7
Thhalv10002577m.g Eutrema salsugineum HOM05D004534 ORTHO05D005413 2.8e-87 325.9 238 65.5
MELO3C026849.2 Cucumis melo HOM05D004534 ORTHO05D005413 1.1e-86 323.9 240 64.6
CsaV3_1G012750 Cucumis sativus L. HOM05D004534 ORTHO05D005413 1.1e-86 323.9 239 64.4
Lj3g0025326 Lotus japonicus HOM05D004534 ORTHO05D005413 1.4e-86 323.6 246 65.9
AT3G45740 Arabidopsis thaliana HOM05D004534 ORTHO05D005413 1.8e-86 323.2 238 66.4
CARHR149920 Cardamine hirsuta HOM05D004534 ORTHO05D005413 2.4e-86 322.8 238 66.0
Oeu051854.2 Olea europaea HOM05D004534 ORTHO05D005413 2.4e-86 322.8 241 66.8
AL5G24380 Arabidopsis lyrata HOM05D004534 ORTHO05D005413 4.0e-86 322.0 238 66.0
DCAR_018857 Daucus carota HOM05D004534 ORTHO05D005413 5.3e-86 321.6 243 64.2
RcHm_v2.0_Chr5g0061761 Rosa chinensis HOM05D004534 ORTHO05D005413 5.3e-86 321.6 244 62.7
THA.LOC104814850 Tarenaya hassleriana HOM05D004534 ORTHO05D005413 5.3e-86 321.6 245 63.7
vmacro14490 Vaccinium macrocarpon HOM05D004534 ORTHO05D005413 5.3e-86 321.6 282 57.8
arahy.Tifrunner.gnm1.ann1.NM19P7 Arachis hypogaea HOM05D004534 ORTHO05D005413 6.9e-86 321.2 246 65.4
arahy.Tifrunner.gnm1.ann1.AW7LWX Arachis hypogaea HOM05D004534 ORTHO05D005413 9.0e-86 320.9 246 65.4
Lalb_Chr24g0394391 Lupinus albus HOM05D004534 ORTHO05D005413 9.0e-86 320.9 237 65.0
VMungo1080G0465 Vigna mungo HOM05D004534 ORTHO05D005413 9.0e-86 320.9 241 65.1
Lsat_1_v5_gn_8_20980 Lactuca sativa HOM05D004534 ORTHO05D005413 1.5e-85 320.1 239 61.1
AUR62009701 Chenopodium quinoa HOM05D004534 ORTHO05D005413 2.6e-85 319.3 240 63.8
Psat5g281360 Pisum sativum HOM05D004534 ORTHO05D005413 3.4e-85 318.9 241 64.7
Sp5g15770 Schrenkiella parvula HOM05D004534 ORTHO05D005413 5.8e-85 318.2 238 63.4
TPR.G11635 Trifolium pratense HOM05D004534 ORTHO05D005413 5.8e-85 318.2 241 64.3
Aa31LG4G14970 Aethionema arabicum HOM05D004534 ORTHO05D005413 7.6e-85 317.8 239 64.0
Phvul.L001232 Phaseolus vulgaris HOM05D004534 ORTHO05D005413 1.0e-84 317.4 241 63.5
Cfa001577 Carpinus fangiana HOM05D004534 ORTHO05D005413 1.7e-84 316.6 243 61.7
Glyma.13G330000 Glycine max HOM05D004534 ORTHO05D005413 3.8e-84 315.5 241 64.3
FvH4_3g34110 Fragaria vesca HOM05D004534 ORTHO05D005413 6.5e-84 314.7 244 61.5
Medtr2g095830 Medicago truncatula HOM05D004534 ORTHO05D005413 1.9e-83 313.2 247 62.8
GSVIVG01016358001 Vitis vinifera HOM05D004534 ORTHO05D005413 1.9e-83 313.2 243 63.0
Prupe.2G220600 Prunus persica HOM05D004534 ORTHO05D005413 3.2e-83 312.4 243 62.6
Atru.chr12.616 Acer truncatum HOM05D004534 ORTHO05D005413 5.5e-83 311.6 243 61.7
CiPaw.01G277800 Carya illinoinensis HOM05D004534 ORTHO05D005413 5.5e-83 311.6 247 61.9
FAN11G3381 Fragaria x ananassa HOM05D004534 ORTHO05D005413 5.5e-83 311.6 244 61.1
PGR044G2491 Punica granatum HOM05D004534 ORTHO05D005413 2.7e-82 309.3 238 60.1
Sc06g0008140 Simmondsia chinensis HOM05D004534 ORTHO05D005413 7.9e-82 307.8 239 62.3
Gohir.A08G000096 Gossypium hirsutum HOM05D004534 ORTHO05D005413 1.0e-81 307.4 251 62.2
CSS0050279 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 1.8e-81 306.6 245 62.4
Haze_16951 Corylus avellana HOM05D004534 ORTHO05D005413 2.3e-81 306.2 242 60.7
Thecc.09G335300 Theobroma cacao HOM05D004534 ORTHO05D005413 3.0e-81 305.8 246 63.4
Gohir.D08G009000 Gossypium hirsutum HOM05D004534 ORTHO05D005413 3.9e-81 305.4 251 61.8
Hund18962 Selenicereus undatus HOM05D004534 ORTHO05D005413 8.7e-81 304.3 239 62.8
PSO384G4947 Papaver somniferum HOM05D004534 ORTHO05D005413 1.1e-80 303.9 244 61.9
HanXRQChr08g0219701 Helianthus annuus HOM05D004534 ORTHO05D005413 1.5e-80 303.5 244 60.7
RcHm_v2.0_Chr1g0364391 Rosa chinensis HOM05D004534 ORTHO05D005413 1.9e-80 303.1 243 60.5
Thecc.10G065400 Theobroma cacao HOM05D004534 ORTHO05D005413 2.5e-80 302.8 243 60.1
EL10Ac7g15886 Beta vulgaris HOM05D004534 ORTHO05D005413 7.4e-80 301.2 276 54.0
Gorai.009G315700 Gossypium raimondii HOM05D004534 ORTHO05D005413 7.4e-80 301.2 246 59.3
Sopen06g031920 Solanum pennellii HOM05D004534 ORTHO05D005413 7.4e-80 301.2 202 71.8
ECA233G2770 Erigeron canadensis HOM05D004534 ORTHO05D000452 9.7e-80 300.8 249 59.0
FAN06G4936 Fragaria x ananassa HOM05D004534 ORTHO05D005413 9.7e-80 300.8 243 59.7
PSO339G4951 Papaver somniferum HOM05D004534 ORTHO05D005413 9.7e-80 300.8 242 62.0
Ciclev10031838m.g Citrus clementina HOM05D004534 ORTHO05D005413 3.7e-79 298.9 239 60.3
Ca_01369_v3 Cicer arietinum L. HOM05D004534 ORTHO05D005413 4.8e-79 298.5 229 62.9
Migut.F02016 Erythranthe guttata HOM05D004534 ORTHO05D005413 4.8e-79 298.5 250 58.0
Zm00001eb397220 Zea mays HOM05D004534 ORTHO05D005413 4.8e-79 298.5 245 58.4
HPP92_003600 Vanilla planifolia HOM05D004534 ORTHO05D005413 6.3e-79 298.1 245 59.2
Potri.010G216000 Populus trichocarpa HOM05D004534 ORTHO05D005413 8.2e-79 297.7 246 61.8
FAN21G3213 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.8e-78 296.6 254 57.1
CDE04G1344 Ceratophyllum demersum HOM05D004534 ORTHO05D005413 3.1e-78 295.8 242 59.5
Gohir.A05G298800 Gossypium hirsutum HOM05D004534 ORTHO05D005413 4.1e-78 295.4 246 58.1
Aqoxy4G03153 Aquilegia oxysepala HOM05D004534 ORTHO05D005413 1.2e-77 293.9 244 60.7
COL.COLO4_23775 Corchorus olitorius HOM05D004534 ORTHO05D005413 1.2e-77 293.9 243 59.3
Potri.008G045700 Populus trichocarpa HOM05D004534 ORTHO05D005413 1.2e-77 293.9 243 59.3
TWI38G2053 Tripterygium wilfordii HOM05D004534 ORTHO05D005413 1.2e-77 293.9 244 60.2
ATR0582G124 Amborella trichopoda HOM05D004534 ORTHO05D005413 1.5e-77 293.5 247 58.7
Actinidia03016 Actinidia chinensis HOM05D004534 ORTHO05D005413 2.0e-77 293.1 244 60.2
Dinv31374 Davidia involucrata HOM05D004534 ORTHO05D005413 2.0e-77 293.1 239 58.6
Gohir.D05G298500 Gossypium hirsutum HOM05D004534 ORTHO05D005413 2.0e-77 293.1 246 58.1
CSS0028612 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 7.7e-77 291.2 269 54.3
Peaxi162Scf01024g00128 Petunia axillaris HOM05D004534 ORTHO05D005413 5.0e-76 288.5 235 59.6
Lj1A180G32 Lonicera japonica HOM05D004534 ORTHO05D005413 6.5e-76 288.1 240 60.8
Os03g0284500 Oryza sativa ssp. japonica HOM05D004534 ORTHO05D005413 3.2e-75 285.8 244 56.6
Nitab4.5_0000561g0030 Nicotiana tabacum HOM05D004534 ORTHO05D005413 7.9e-74 281.2 248 55.6
CsaV3_5G026040 Cucumis sativus L. HOM05D004534 ORTHO05D005413 6.7e-73 278.1 248 56.0
MD07G1181700 Malus domestica HOM05D004534 ORTHO05D005413 2.5e-72 276.2 228 59.6
EL10Ac2g03539 Beta vulgaris HOM05D004534 ORTHO05D005413 3.3e-72 275.8 242 55.0
MELO3C025495.2 Cucumis melo HOM05D004534 ORTHO05D005413 8.2e-71 271.2 258 55.0
AUR62036245 Chenopodium quinoa HOM05D004534 ORTHO05D005413 1.0e-68 264.2 241 55.6
FAN03G3228 Fragaria x ananassa HOM05D004534 ORTHO05D005413 5.5e-67 258.5 243 53.9
FAN25G2491 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.0e-65 254.2 271 49.8
Carub.0005s1159 Capsella rubella HOM05D004534 ORTHO05D005413 8.2e-63 244.6 192 63.0
Cc09_g02390 Coffea canephora HOM05D004534 ORTHO05D005413 1.1e-62 244.2 194 61.3
Gorai.004G002200 Gossypium raimondii HOM05D004534 ORTHO05D005413 1.1e-62 244.2 200 60.5
Sed0004393 Sechium edule HOM05D004534 ORTHO05D005413 3.1e-62 242.7 194 60.3
FAN01G1783 Fragaria x ananassa HOM05D004534 ORTHO05D005413 4.1e-62 242.3 275 48.4
Duzib106G1068 Durio zibethinus HOM05D004534 ORTHO05D005413 4.5e-61 238.8 243 51.9
Sabra08G0032000 Salix brachista HOM05D004534 ORTHO05D005413 5.9e-61 238.4 234 51.7
Ah.10g033090 Amaranthus hybridus HOM05D004534 ORTHO05D005413 1.3e-60 237.3 240 49.2
Lj1A926G31 Lonicera japonica HOM05D004534 ORTHO05D005413 1.7e-60 236.9 237 51.9
Oeu055059.2 Olea europaea HOM05D004534 ORTHO05D005413 5.0e-60 235.3 208 55.8
Manes.10G040600 Manihot esculenta HOM05D004534 ORTHO05D005413 6.5e-60 235.0 248 51.6
Pp3c16_8740 Physcomitrium patens HOM05D004534 ORTHO05D005413 8.5e-60 234.6 269 48.7
FAN06G3998 Fragaria x ananassa HOM05D004534 ORTHO05D005413 3.2e-59 232.6 352 40.6
Nitab4.5_0000830g0040 Nicotiana tabacum HOM05D004534 ORTHO05D005413 2.7e-58 229.6 244 51.2
Ciclev10032311m.g Citrus clementina HOM05D004534 ORTHO05D005413 6.1e-58 228.4 264 49.2
SMO118G0317 Selaginella moellendorffii HOM05D004534 ORTHO05D005413 6.1e-58 228.4 238 50.8
FAN16G0790 Fragaria x ananassa HOM05D004534 ORTHO05D005413 3.9e-57 225.7 267 48.3
QL08p057247 Quercus lobata HOM05D004534 ORTHO05D005413 6.7e-57 224.9 442 33.3
Sabra10G0167000 Salix brachista HOM05D004534 ORTHO05D005413 1.7e-55 220.3 268 48.1
Mapoly0029s0123 Marchantia polymorpha HOM05D004534 ORTHO05D005413 6.3e-55 218.4 251 45.0
AUR62036013 Chenopodium quinoa HOM05D004534 ORTHO05D005413 7.0e-54 214.9 246 45.5
ClCG09G020370 Citrullus lanatus HOM05D004534 ORTHO05D005413 6.5e-52 208.4 238 47.5
COL.COLO4_18394 Corchorus olitorius HOM05D004534 ORTHO05D005413 1.2e-50 204.1 230 49.6
FAN10G0821 Fragaria x ananassa HOM05D004534 ORTHO05D005413 8.3e-47 191.4 280 42.1
CiPaw.13G104100 Carya illinoinensis HOM05D004534 ORTHO05D005413 1.0e-44 184.5 131 66.4
Prupe.6G090300 Prunus persica HOM05D004534 ORTHO05D005413 5.5e-43 178.7 129 68.2
TAR633G1279 Trochodendron aralioides HOM05D004534 ORTHO05D005413 8.0e-42 174.9 130 63.1
Cpa.g.sc1.278 Carica papaya HOM05D004534 ORTHO05D005413 4.8e-39 165.6 244 39.8
FvH4_7g20500 Fragaria vesca HOM05D004534 ORTHO05D005413 3.1e-38 162.9 133 57.9
Nitab4.5_0000830g0060 Nicotiana tabacum HOM05D004534 ORTHO05D005413 1.1e-35 154.5 172 49.4
AagrBONN_evm.TU.Sc2ySwM_228.5090 Anthoceros agrestis HOM05D004534 ORTHO05D005413 1.3e-31 141.0 129 51.2
Cre01.g013250 Chlamydomonas reinhardtii HOM05D004534 ORTHO05D005413 7.0e-30 135.2 190 38.4
CBR_g24062 Chara braunii HOM05D004534 ORTHO05D005413 1.0e-28 131.3 193 40.9
MBI18_g24932_MAGBIO Magnolia biondii HOM05D004534 ORTHO05D005413 1.7e-28 130.6 150 43.3
AUR62035991 Chenopodium quinoa HOM05D004534 ORTHO05D005413 9.8e-24 114.8 114 48.2
Cfa024137 Carpinus fangiana HOM05D004534 ORTHO05D005413 4.6e-21 105.9 270 29.3
PRCOL_00005152 Prasinoderma coloniale HOM05D004534 ORTHO05D005413 1.5e-16 90.9 217 28.6
RcHm_v2.0_Chr1g0364361 Rosa chinensis HOM05D003391 ORTHO05D005413 8.3e-15 85.1 56 64.3
VMungo0464G2039 Vigna mungo HOM05D004534 ORTHO05D005413 1.1e-14 84.7 77 58.4
Glyma.15G044000 Glycine max HOM05D004534 ORTHO05D005413 1.2e-13 81.3 75 54.7
RcHm_v2.0_Chr5g0046071 Rosa chinensis HOM05D004534 ORTHO05D005413 1.6e-13 80.9 46 76.1
Nitab4.5_0000830g0070 Nicotiana tabacum HOM05D004534 ORTHO05D005413 3.6e-10 69.7 43 74.4
AagrBONN_evm.TU.Sc2ySwM_117.2640 Anthoceros agrestis HOM05D012537 ORTHO05D009535 4.1e-06 56.2 33 66.7
CAN.G1235.22 Capsicum annuum HOM05D000680 ORTHO05D000738 7.1e-06 55.5 54 50.0


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