Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold61G21159 Striga asiatica HOM05D008415 ORTHO05D010601 3.8e-140 501.5 254 100.0
MSTRG.18650 Avicennia marina HOM05D008415 ORTHO05D010601 5.9e-61 238.4 278 54.0
Migut.D02196 Erythranthe guttata HOM05D008415 ORTHO05D010601 2.8e-58 229.6 270 51.9
SalBow3G0300 Salvia bowleyana HOM05D008415 ORTHO05D010601 1.8e-57 226.9 244 54.1
Sopen11g027940 Solanum pennellii HOM05D008415 ORTHO05D010601 3.9e-52 209.1 236 53.0
Solyc11g069210.2 Solanum lycopersicum HOM05D008415 ORTHO05D010601 5.0e-52 208.8 237 52.3
Oeu059099.1 Olea europaea HOM05D008415 ORTHO05D010601 1.1e-51 207.6 286 46.9
PGSC0003DMG400008064 Solanum tuberosum HOM05D008415 ORTHO05D010601 1.9e-51 206.8 236 51.3
CAN.G631.8 Capsicum annuum HOM05D008415 ORTHO05D010601 3.6e-50 202.6 274 47.8
Nitab4.5_0000650g0050 Nicotiana tabacum HOM05D008415 ORTHO05D010601 1.5e-48 197.2 273 45.1
Peaxi162Scf00351g00214 Petunia axillaris HOM05D008415 ORTHO05D010601 1.7e-47 193.7 239 46.9
Dinv32770 Davidia involucrata HOM05D008415 ORTHO05D010601 4.6e-45 185.7 254 42.1
GSVIVG01025161001 Vitis vinifera HOM05D008415 ORTHO05D010601 1.6e-42 177.2 241 46.1
Cc01_g11390 Coffea canephora HOM05D008415 ORTHO05D010601 4.7e-42 175.6 265 44.5
vmacro14451 Vaccinium macrocarpon HOM05D008415 ORTHO05D010601 1.8e-41 173.7 269 43.1
Actinidia03741 Actinidia chinensis HOM05D008415 ORTHO05D010601 6.4e-39 165.2 257 40.9
MELO3C025762.2 Cucumis melo HOM05D008415 ORTHO05D010601 1.4e-38 164.1 237 43.5
QL01p023166 Quercus lobata HOM05D008415 ORTHO05D010601 1.4e-38 164.1 263 38.8
ECA238G2082 Erigeron canadensis HOM05D008415 ORTHO05D010601 5.4e-38 162.2 232 42.7
PGR119G0199 Punica granatum HOM05D008415 ORTHO05D010601 7.1e-38 161.8 202 45.0
Rhsim01G0218700 Rhododendron simsii HOM05D008415 ORTHO05D010601 2.1e-37 160.2 260 42.7
CsaV3_6G021730 Cucumis sativus L. HOM05D008415 ORTHO05D010601 1.7e-36 157.1 234 42.3
Psat7g223880 Pisum sativum HOM05D008415 ORTHO05D010601 3.0e-36 156.4 230 41.7
TAR633G1891 Trochodendron aralioides HOM05D008415 ORTHO05D010601 3.9e-36 156.0 274 38.3
CSS0041118 Camellia sinensis var. sinensis HOM05D008415 ORTHO05D010601 1.1e-35 154.5 211 42.2
Lsat_1_v5_gn_2_98161 Lactuca sativa HOM05D008415 ORTHO05D010601 3.3e-35 152.9 247 40.9
unitig_46.g18232 Utricularia gibba HOM05D008415 ORTHO05D010601 1.6e-34 150.6 246 41.1
Eucgr.J00943 Eucalyptus grandis HOM05D008415 ORTHO05D010601 6.2e-34 148.7 335 33.7
ClCG02G021040 Citrullus lanatus HOM05D008415 ORTHO05D010601 2.3e-33 146.7 263 38.4
Sed0001336 Sechium edule HOM05D008415 ORTHO05D010601 5.2e-33 145.6 232 39.2
Lj3g0013437 Lotus japonicus HOM05D008415 ORTHO05D010601 3.4e-32 142.9 248 37.5
arahy.Tifrunner.gnm1.ann1.TY33PY Arachis hypogaea HOM05D008415 ORTHO05D010601 2.9e-31 139.8 226 43.4
HanXRQChr14g0445691 Helianthus annuus HOM05D008415 ORTHO05D010601 8.4e-31 138.3 262 37.8
arahy.Tifrunner.gnm1.ann1.C7LIDW Arachis hypogaea HOM05D008415 ORTHO05D010601 1.1e-30 137.9 252 40.9
Hma1.2p1_1931F.1_g307990 Hydrangea macrophylla HOM05D008415 ORTHO05D010601 2.4e-30 136.7 126 54.0
Hma1.2p1_2585F.1_g324920 Hydrangea macrophylla HOM05D008415 ORTHO05D010601 2.4e-30 136.7 126 54.0
Glyma.12G070700 Glycine max HOM05D008415 ORTHO05D010601 1.2e-29 134.4 240 40.0
Lalb_Chr19g0137361 Lupinus albus HOM05D008415 ORTHO05D010601 3.5e-29 132.9 238 36.1
Glyma.11G154841 Glycine max HOM05D008415 ORTHO05D010601 2.3e-28 130.2 231 37.7
Ca_19250_v3 Cicer arietinum L. HOM05D008415 ORTHO05D010601 3.0e-28 129.8 109 53.2
Haze_23892 Corylus avellana HOM05D008415 ORTHO05D010601 1.6e-26 124.0 234 38.9
Medtr4g060050 Medicago truncatula HOM05D008415 ORTHO05D010601 1.1e-25 121.3 147 44.2
VMungo1127G1728 Vigna mungo HOM05D008415 ORTHO05D010601 1.8e-25 120.6 155 40.6
CSS0005479 Camellia sinensis var. sinensis HOM05D008415 ORTHO05D010601 4.0e-25 119.4 176 42.0
CANSAT54G1687 Cannabis sativa HOM05D008415 ORTHO05D010601 5.2e-25 119.0 239 36.8
Aqoxy2G01080 Aquilegia oxysepala HOM05D008415 ORTHO05D010601 7.1e-22 108.6 102 49.0
Cc07_g02980 Coffea canephora HOM05D008415 ORTHO05D010601 7.1e-22 108.6 116 44.8
Phvul.011G073700 Phaseolus vulgaris HOM05D008415 ORTHO05D010601 8.7e-20 101.7 87 51.7
CiPaw.14G078500 Carya illinoinensis HOM05D008415 ORTHO05D010601 1.5e-19 100.9 96 56.2
Os03g0288900 Oryza sativa ssp. japonica HOM05D008415 ORTHO05D010601 6.2e-18 95.5 86 52.3
TPR.G15532 Trifolium pratense HOM05D008415 ORTHO05D010601 8.1e-18 95.1 129 41.1
Potri.016G129250 Populus trichocarpa HOM05D008415 ORTHO05D010601 9.0e-17 91.7 233 31.8
Ah.02g113290 Amaranthus hybridus HOM05D005535 ORTHO05D006753 2.7e-13 80.1 185 33.5
SEGI_01090 Sequoiadendron giganteum HOM05D005535 ORTHO05D006753 3.5e-13 79.7 263 28.1
AUR62021726 Chenopodium quinoa HOM05D005535 ORTHO05D006753 4.6e-13 79.3 187 32.6
Nitab4.5_0004931g0020 Nicotiana tabacum HOM05D005535 ORTHO05D006753 3.9e-12 76.3 172 30.8
Duzib084G1387 Durio zibethinus HOM05D005535 ORTHO05D006753 1.1e-11 74.7 194 31.4
AUR62008371 Chenopodium quinoa HOM05D005535 ORTHO05D006753 1.5e-11 74.3 238 30.3
Nitab4.5_0000269g0110 Nicotiana tabacum HOM05D005535 ORTHO05D006753 4.3e-11 72.8 190 29.5
Hma1.2p1_1617F.1_g293810 Hydrangea macrophylla HOM05D005535 ORTHO05D006753 7.4e-11 72.0 169 32.5
Thecc.03G081300 Theobroma cacao HOM05D005535 ORTHO05D006753 2.1e-10 70.5 193 32.1
EL10Ac5g10956 Beta vulgaris HOM05D005535 ORTHO05D006753 2.8e-10 70.1 204 29.4
Duzib205G0302 Durio zibethinus HOM05D005535 ORTHO05D006753 2.8e-10 70.1 221 31.2
Glyma.05G028700 Glycine max HOM05D005535 ORTHO05D006753 2.8e-10 70.1 138 34.1
Phvul.003G191800 Phaseolus vulgaris HOM05D005535 ORTHO05D006753 3.6e-10 69.7 196 31.6
Sc10g0009960 Simmondsia chinensis HOM05D005535 ORTHO05D006753 3.6e-10 69.7 193 30.6
PGSC0003DMG401018143 Solanum tuberosum HOM05D005535 ORTHO05D006753 3.6e-10 69.7 188 30.3
Eucgr.B00441 Eucalyptus grandis HOM05D005535 ORTHO05D006753 4.8e-10 69.3 180 31.1
SalBow5G0107 Salvia bowleyana HOM05D005535 ORTHO05D006753 4.8e-10 69.3 142 33.8
PGSC0003DMG400033073 Solanum tuberosum HOM05D005535 ORTHO05D006753 4.8e-10 69.3 136 31.6
FAN08G2745 Fragaria x ananassa HOM05D005535 ORTHO05D006753 6.2e-10 68.9 200 32.5
QL10p015851 Quercus lobata HOM05D005535 ORTHO05D006753 6.2e-10 68.9 191 28.8
RcHm_v2.0_Chr7g0180761 Rosa chinensis HOM05D005535 ORTHO05D006753 6.2e-10 68.9 203 31.5
FAN13G1299 Fragaria x ananassa HOM05D005535 ORTHO05D006753 8.1e-10 68.6 212 31.1
MBI01_g12912_MAGBIO Magnolia biondii HOM05D005535 ORTHO05D006753 8.1e-10 68.6 237 27.4
Solyc03g113090.3 Solanum lycopersicum HOM05D005535 ORTHO05D006753 8.1e-10 68.6 188 31.4
Ca_21840_v3 Cicer arietinum L. HOM05D005535 ORTHO05D006753 1.1e-09 68.2 158 31.0
Medtr4g108100 Medicago truncatula HOM05D005535 ORTHO05D006753 1.1e-09 68.2 196 28.6
SalBow5G2281 Salvia bowleyana HOM05D005535 ORTHO05D006753 1.1e-09 68.2 142 33.1
Sopen03g032160 Solanum pennellii HOM05D005535 ORTHO05D006753 1.1e-09 68.2 188 31.4
Dinv19929 Davidia involucrata HOM05D005535 ORTHO05D006753 1.4e-09 67.8 158 31.6
Nitab4.5_0000785g0140 Nicotiana tabacum HOM05D005535 ORTHO05D006753 1.4e-09 67.8 176 30.7
ATR1120G167 Amborella trichopoda HOM05D005535 ORTHO05D006753 1.8e-09 67.4 195 29.7
Solyc06g070970.3 Solanum lycopersicum HOM05D005535 ORTHO05D006753 1.8e-09 67.4 161 31.7
CSS0007998 Camellia sinensis var. sinensis HOM05D005535 ORTHO05D006753 2.4e-09 67.0 187 29.4
Nitab4.5_0004785g0010 Nicotiana tabacum HOM05D005535 ORTHO05D006753 2.4e-09 67.0 188 30.3
SGA_v2.0_scaffold56G20044 Striga asiatica HOM05D005535 ORTHO05D006753 2.4e-09 67.0 162 30.9
CAN.G628.33 Capsicum annuum HOM05D005535 ORTHO05D006753 3.1e-09 66.6 147 29.3
Sopen06g027240 Solanum pennellii HOM05D005535 ORTHO05D006753 3.1e-09 66.6 149 30.2
Sed0009946 Sechium edule HOM05D005535 ORTHO05D006753 4.0e-09 66.2 164 31.7
CsaV3_1G002190 Cucumis sativus L. HOM05D005535 ORTHO05D006753 5.3e-09 65.9 165 32.1
FvH4_5g15300 Fragaria vesca HOM05D005535 ORTHO05D006753 6.9e-09 65.5 212 30.7
TWI34G0031 Tripterygium wilfordii HOM05D005535 ORTHO05D006753 6.9e-09 65.5 154 29.9
COL.COLO4_14041 Corchorus olitorius HOM05D005535 ORTHO05D006753 9.0e-09 65.1 217 28.6
Lj5A114T27 Lonicera japonica HOM05D005535 ORTHO05D006753 9.0e-09 65.1 164 29.3
Lj4g0008602 Lotus japonicus HOM05D005535 ORTHO05D006753 9.0e-09 65.1 229 27.1
Peaxi162Scf00009g00219 Petunia axillaris HOM05D005535 ORTHO05D006753 9.0e-09 65.1 189 30.2
Peaxi162Scf00013g00129 Petunia axillaris HOM05D005535 ORTHO05D006753 9.0e-09 65.1 156 28.2
Prupe.5G188200 Prunus persica HOM05D005535 ORTHO05D006753 9.0e-09 65.1 106 37.7
SGA_v2.0_scaffold162G37926 Striga asiatica HOM05D005535 ORTHO05D006753 9.0e-09 65.1 158 32.9
HPP92_024074 Vanilla planifolia HOM05D005535 ORTHO05D006753 9.0e-09 65.1 226 28.8
FAN18G1286 Fragaria x ananassa HOM05D005535 ORTHO05D006753 1.2e-08 64.7 177 33.3
TWI60G0583 Tripterygium wilfordii HOM05D005535 ORTHO05D006753 1.2e-08 64.7 204 28.4
ClCG06G016340 Citrullus lanatus HOM05D005535 ORTHO05D006753 1.5e-08 64.3 165 30.9
FAN04G1197 Fragaria x ananassa HOM05D005535 ORTHO05D006753 1.5e-08 64.3 243 29.2
Hund09363 Selenicereus undatus HOM05D005535 ORTHO05D006753 1.5e-08 64.3 213 28.6
MSTRG.11394 Avicennia marina HOM05D005535 ORTHO05D006753 2.0e-08 63.9 159 32.1
Hma1.2p1_0104F.1_g050150 Hydrangea macrophylla HOM05D005535 ORTHO05D006753 2.0e-08 63.9 181 28.7
Nn3g17153 Nelumbo nucifera HOM05D005535 ORTHO05D006753 2.0e-08 63.9 194 29.9
TAR371G0260 Trochodendron aralioides HOM05D005535 ORTHO05D006753 2.0e-08 63.9 182 30.2
Cfa018977 Carpinus fangiana HOM05D005535 ORTHO05D006753 2.6e-08 63.5 233 29.2
Glyma.17G098100 Glycine max HOM05D005535 ORTHO05D006753 2.6e-08 63.5 170 31.2
Potri.015G063700 Populus trichocarpa HOM05D005535 ORTHO05D006753 2.6e-08 63.5 168 29.8
unitig_26.g9639 Utricularia gibba HOM05D005535 ORTHO05D006753 2.6e-08 63.5 193 30.6
vmacro16564 Vaccinium macrocarpon HOM05D005535 ORTHO05D006753 2.6e-08 63.5 228 26.3
Zm00001eb386190 Zea mays HOM05D005535 ORTHO05D006753 2.6e-08 63.5 202 29.7
Dinv38677 Davidia involucrata HOM05D005535 ORTHO05D006753 3.4e-08 63.2 181 28.7
Lj9A460T58 Lonicera japonica HOM05D005535 ORTHO05D006753 3.4e-08 63.2 182 27.5
PSO832G1146 Papaver somniferum HOM05D005535 ORTHO05D006753 3.4e-08 63.2 195 26.7
Rhsim08G0158400 Rhododendron simsii HOM05D005535 ORTHO05D006753 3.4e-08 63.2 181 29.3
Sabra15G0089300 Salix brachista HOM05D005535 ORTHO05D006753 3.4e-08 63.2 188 28.7
BcaB02g09657 Brassica carinata HOM05D005535 ORTHO05D006753 4.5e-08 62.8 191 28.8
MELO3C017158.2 Cucumis melo HOM05D005535 ORTHO05D006753 4.5e-08 62.8 237 28.3
Oeu006178.3 Olea europaea HOM05D005535 ORTHO05D006753 4.5e-08 62.8 114 34.2
TAR629G1161 Trochodendron aralioides HOM05D005535 ORTHO05D006753 4.5e-08 62.8 112 32.1
CANSAT80G1786 Cannabis sativa HOM05D005535 ORTHO05D006753 5.8e-08 62.4 200 28.0
Phvul.009G189600 Phaseolus vulgaris HOM05D005535 ORTHO05D006753 5.8e-08 62.4 156 31.4
Actinidia34981 Actinidia chinensis HOM05D005535 ORTHO05D006753 7.6e-08 62.0 241 27.0
Aa31LG11G1090 Aethionema arabicum HOM05D005535 ORTHO05D006753 7.6e-08 62.0 153 30.7
CSS0007804 Camellia sinensis var. sinensis HOM05D005535 ORTHO05D006753 7.6e-08 62.0 205 27.8
BraA06t25881Z Brassica rapa HOM05D005535 ORTHO05D006753 9.9e-08 61.6 230 26.5
Gohir.A12G175600 Gossypium hirsutum HOM05D005535 ORTHO05D006753 9.9e-08 61.6 169 31.4
Thecc.09G258600 Theobroma cacao HOM05D008415 ORTHO05D010601 9.9e-08 61.6 159 35.8
CiPaw.12G015700 Carya illinoinensis HOM05D005535 ORTHO05D006753 1.3e-07 61.2 165 31.5
BcaC01g02485 Brassica carinata HOM05D005535 ORTHO05D006753 1.7e-07 60.8 209 27.8
A06p29250 Brassica napus HOM05D005535 ORTHO05D006753 1.7e-07 60.8 232 26.7
C03p64280 Brassica napus HOM05D005535 ORTHO05D006753 1.7e-07 60.8 209 27.8
BolC3t18683H Brassica oleracea HOM05D005535 ORTHO05D006753 1.7e-07 60.8 209 27.8
Gorai.008G191600 Gossypium raimondii HOM05D005535 ORTHO05D006753 1.7e-07 60.8 157 31.8
Psat4g052400 Pisum sativum HOM05D005535 ORTHO05D006753 1.7e-07 60.8 156 28.8
Atru.chr9.2302 Acer truncatum HOM05D005535 ORTHO05D006753 2.2e-07 60.5 144 32.6
Gohir.D12G178800 Gossypium hirsutum HOM05D005535 ORTHO05D006753 2.2e-07 60.5 169 30.8
Sp2g25720 Schrenkiella parvula HOM05D005535 ORTHO05D006753 2.2e-07 60.5 234 26.9
VMungo1215G1657 Vigna mungo HOM05D005535 ORTHO05D006753 2.2e-07 60.5 211 29.9
Zm00001eb277070 Zea mays HOM05D005535 ORTHO05D006753 2.2e-07 60.5 176 30.7
Actinidia19054 Actinidia chinensis HOM05D005535 ORTHO05D006753 2.9e-07 60.1 204 27.0
Aqoxy3G03311 Aquilegia oxysepala HOM05D005535 ORTHO05D006753 2.9e-07 60.1 144 31.9
arahy.Tifrunner.gnm1.ann1.G5WMYY Arachis hypogaea HOM05D005535 ORTHO05D006753 2.9e-07 60.1 180 28.9
Lj1g0015301 Lotus japonicus HOM05D005535 ORTHO05D006753 2.9e-07 60.1 194 27.8
Oeu022201.1 Olea europaea HOM05D005535 ORTHO05D006753 2.9e-07 60.1 153 30.7
Aqoxy3G00718 Aquilegia oxysepala HOM05D005535 ORTHO05D006753 4.9e-07 59.3 74 39.2
PSO591G0334 Papaver somniferum HOM05D005535 ORTHO05D006753 4.9e-07 59.3 195 26.2
Actinidia04914 Actinidia chinensis HOM05D005535 ORTHO05D006753 6.4e-07 58.9 210 28.1
Lalb_Chr12g0196771 Lupinus albus HOM05D005535 ORTHO05D006753 6.4e-07 58.9 196 28.1
Rhsim12G0158200 Rhododendron simsii HOM05D005535 ORTHO05D006753 6.4e-07 58.9 211 26.5
VMungo1309G2126 Vigna mungo HOM05D005535 ORTHO05D006753 6.4e-07 58.9 138 29.7
arahy.Tifrunner.gnm1.ann1.WGP01G Arachis hypogaea HOM05D005535 ORTHO05D006753 8.4e-07 58.5 177 26.6
Cpa.g.sc17.224 Carica papaya HOM05D005535 ORTHO05D006753 8.4e-07 58.5 143 25.2
MD14G1196400 Malus domestica HOM05D005535 ORTHO05D006753 8.4e-07 58.5 230 27.8
PSO478G1818 Papaver somniferum HOM05D005535 ORTHO05D006753 8.4e-07 58.5 149 30.9
Manes.06G095400 Manihot esculenta HOM05D005535 ORTHO05D006753 1.1e-06 58.2 218 25.7
PSO017G0680 Papaver somniferum HOM05D005535 ORTHO05D006753 1.1e-06 58.2 149 30.9
PGR083G2381 Punica granatum HOM05D005535 ORTHO05D006753 1.1e-06 58.2 172 29.1
AT5G62550 Arabidopsis thaliana HOM05D005535 ORTHO05D006753 1.4e-06 57.8 199 27.1
Cc04_g15390 Coffea canephora HOM05D005535 ORTHO05D006753 1.9e-06 57.4 201 27.4
Thhalv10004313m.g Eutrema salsugineum HOM05D005535 ORTHO05D006753 1.9e-06 57.4 188 27.7
TPR.G27376 Trifolium pratense HOM05D005535 ORTHO05D006753 1.9e-06 57.4 210 25.2
HanXRQChr05g0158021 Helianthus annuus HOM05D005535 ORTHO05D006753 3.2e-06 56.6 110 30.9
Lalb_Chr13g0303381 Lupinus albus HOM05D005535 ORTHO05D006753 3.2e-06 56.6 216 27.8
vmacro17524 Vaccinium macrocarpon HOM05D005535 ORTHO05D006753 3.2e-06 56.6 167 28.7
Migut.I00138 Erythranthe guttata HOM05D005535 ORTHO05D006753 4.2e-06 56.2 180 28.3
Os06g0589500 Oryza sativa ssp. japonica HOM05D005535 ORTHO05D006753 4.2e-06 56.2 242 26.0
Carub.0008s2322 Capsella rubella HOM05D005535 ORTHO05D006753 9.3e-06 55.1 202 26.7
MD06G1189400 Malus domestica HOM05D005535 ORTHO05D006753 9.3e-06 55.1 229 26.2
GSVIVG01008044001 Vitis vinifera HOM05D005535 ORTHO05D006753 9.3e-06 55.1 151 30.5


User provided reference genes

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