Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold61G21156 Striga asiatica HOM05D008413 ORTHO05D000401 3.5e-144 515.0 273 100.0
SGA_v2.0_scaffold90G27840 Striga asiatica HOM05D008413 ORTHO05D000401 5.5e-121 438.0 270 86.7
SGA_v2.0_scaffold119G32741 Striga asiatica HOM05D008413 ORTHO05D000401 3.6e-120 435.3 270 86.3
SGA_v2.0_scaffold368G50078 Striga asiatica HOM05D008413 ORTHO05D000401 8.2e-117 424.1 270 84.1
SGA_v2.0_scaffold177G39426 Striga asiatica HOM05D008413 ORTHO05D000401 1.1e-116 423.7 270 86.3
SGA_v2.0_scaffold218G42484 Striga asiatica HOM05D008413 ORTHO05D000401 3.6e-88 328.9 268 62.7
SGA_v2.0_scaffold323G48638 Striga asiatica HOM05D008413 ORTHO05D000401 2.1e-72 276.6 194 76.8
SGA_v2.0_scaffold169G38717 Striga asiatica HOM05D008413 ORTHO05D000401 1.4e-71 273.9 266 57.5
SGA_v2.0_scaffold12G05983 Striga asiatica HOM05D008413 ORTHO05D000401 2.1e-64 250.0 198 64.1
SGA_v2.0_scaffold85G26643 Striga asiatica HOM05D008413 ORTHO05D000401 7.5e-54 214.9 263 46.0
SGA_v2.0_scaffold4G02509 Striga asiatica HOM05D008413 ORTHO05D000401 2.2e-53 213.4 228 53.5
SGA_v2.0_scaffold17G08026 Striga asiatica HOM05D008413 ORTHO05D000401 2.1e-51 206.8 280 49.6
SGA_v2.0_scaffold234G43617 Striga asiatica HOM05D008413 ORTHO05D000401 1.5e-49 200.7 268 42.9
SGA_v2.0_scaffold208G41998 Striga asiatica HOM05D008413 ORTHO05D000401 4.3e-49 199.1 270 42.6
SGA_v2.0_scaffold28G12014 Striga asiatica HOM05D008413 ORTHO05D000401 1.6e-48 197.2 305 40.0
Atru.chr1.1934 Acer truncatum HOM05D008413 ORTHO05D000401 1.4e-47 194.1 279 46.2
Atru.chr1.2141 Acer truncatum HOM05D008413 ORTHO05D000401 6.8e-47 191.8 273 44.7
SGA_v2.0_scaffold50G18468 Striga asiatica HOM05D008413 ORTHO05D000401 2.3e-42 176.8 219 44.7
PSO478G0274 Papaver somniferum HOM05D008413 ORTHO05D000401 2.4e-39 166.8 274 36.5
PSO541G5389 Papaver somniferum HOM05D008413 ORTHO05D000401 4.0e-39 166.0 274 36.9
SGA_v2.0_scaffold90G27895 Striga asiatica HOM05D008413 ORTHO05D000401 4.0e-39 166.0 133 64.7
PSO591G0033 Papaver somniferum HOM05D008413 ORTHO05D000401 2.1e-35 153.7 274 36.1
PSO063G5428 Papaver somniferum HOM05D008413 ORTHO05D000401 8.7e-34 148.3 267 35.6
PSO063G1996 Papaver somniferum HOM05D008413 ORTHO05D000401 2.5e-33 146.7 267 35.6
PSO675G5967 Papaver somniferum HOM05D008413 ORTHO05D000401 2.1e-32 143.7 254 35.0
PSO017G6541 Papaver somniferum HOM05D008413 ORTHO05D000401 6.2e-32 142.1 201 40.3
PSO782G4524 Papaver somniferum HOM05D008413 ORTHO05D000401 4.9e-29 132.5 202 36.6
SGA_v2.0_scaffold84G26501 Striga asiatica HOM05D008413 ORTHO05D000401 1.1e-28 131.3 195 43.1
SGA_v2.0_scaffold176G39371 Striga asiatica HOM05D008413 ORTHO05D000401 1.9e-28 130.6 288 36.1
SGA_v2.0_scaffold55G19853 Striga asiatica HOM05D008413 ORTHO05D000401 6.0e-27 125.6 192 41.7
PSO541G0947 Papaver somniferum HOM05D008413 ORTHO05D000401 1.0e-26 124.8 169 40.8
SGA_v2.0_scaffold22G09929 Striga asiatica HOM05D008413 ORTHO05D000401 3.0e-26 123.2 263 34.2
PSO384G2190 Papaver somniferum HOM05D008413 ORTHO05D000401 3.9e-26 122.9 267 34.5
SGA_v2.0_scaffold74G24716 Striga asiatica HOM05D008413 ORTHO05D000401 4.0e-23 112.8 286 32.2
SGA_v2.0_scaffold18G08316 Striga asiatica HOM05D008413 ORTHO05D000401 2.0e-22 110.5 171 48.0
SGA_v2.0_scaffold284G47013 Striga asiatica HOM05D008413 ORTHO05D000401 2.6e-22 110.2 289 30.8
SGA_v2.0_scaffold86G26910 Striga asiatica HOM05D008413 ORTHO05D000401 7.6e-22 108.6 65 75.4
SGA_v2.0_scaffold19G08596 Striga asiatica HOM05D008413 ORTHO05D000401 1.7e-21 107.5 114 53.5
SGA_v2.0_scaffold221G42721 Striga asiatica HOM05D008413 ORTHO05D000401 9.3e-20 101.7 256 30.9
PSO339G5332 Papaver somniferum HOM05D008413 ORTHO05D000401 1.2e-19 101.3 260 31.5
SGA_v2.0_scaffold38G15030 Striga asiatica HOM05D008413 ORTHO05D000401 5.1e-18 95.9 263 30.4
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.7e-16 89.7 259 28.6
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.4e-15 87.0 257 27.2
SGA_v2.0_scaffold323G48637 Striga asiatica HOM05D008413 ORTHO05D000401 3.1e-15 86.7 50 82.0
SGA_v2.0_scaffold241G44187 Striga asiatica HOM05D008413 ORTHO05D000401 4.1e-15 86.3 138 39.9
TWI60G0823 Tripterygium wilfordii HOM05D001576 ORTHO05D010240 1.3e-13 81.3 257 28.8
Atru.chr11.187 Acer truncatum HOM05D008413 ORTHO05D000401 2.2e-13 80.5 63 58.7
TWI12G1451 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.8e-13 79.7 195 31.3
Hma1.2p1_1313F.1_g274940 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 6.5e-13 79.0 164 32.3
SGA_v2.0_scaffold260G45865 Striga asiatica HOM05D001576 ORTHO05D000401 6.5e-13 79.0 267 27.3
SGA_v2.0_scaffold309G48177 Striga asiatica HOM05D001576 ORTHO05D000401 6.5e-13 79.0 265 27.2
Zm00001eb138070 Zea mays HOM05D001576 ORTHO05D000401 4.2e-12 76.3 254 26.4
SGA_v2.0_scaffold11G05878 Striga asiatica HOM05D001576 ORTHO05D000401 5.5e-12 75.9 255 27.5
SGA_v2.0_scaffold239G43990 Striga asiatica HOM05D001576 ORTHO05D000401 5.5e-12 75.9 255 27.5
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 7.1e-12 75.5 271 27.7
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 2.3e-10 70.5 263 28.9
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.9e-10 69.7 282 27.7
PSO170G1591 Papaver somniferum HOM05D008413 ORTHO05D000401 1.1e-09 68.2 66 50.0
Dinv41014 Davidia involucrata HOM05D001668 ORTHO05D001693 1.5e-09 67.8 169 32.0
Rhsim13G0070800 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.9e-09 67.4 70 41.4
Aqoxy1G02949 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 3.3e-09 66.6 200 24.5
ECA246G1137 Erigeron canadensis HOM05D000464 ORTHO05D000408 3.3e-09 66.6 84 34.5
Aqoxy5G02988 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 5.7e-09 65.9 269 26.4
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.7e-09 65.9 271 26.2
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.7e-09 65.9 271 26.2
Aqoxy3G02110 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 7.4e-09 65.5 200 24.5
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 7.4e-09 65.5 144 28.5
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 7.4e-09 65.5 144 28.5
RhsimUnG0137500 Rhododendron simsii HOM05D001576 ORTHO05D000401 7.4e-09 65.5 176 31.8
Prupe.1G172500 Prunus persica HOM05D001576 ORTHO05D000401 3.7e-08 63.2 156 30.1
SGA_v2.0_scaffold231G43417 Striga asiatica HOM05D008413 ORTHO05D000401 4.8e-08 62.8 53 50.9
ECA247G3187 Erigeron canadensis HOM05D008106 ORTHO05D010314 8.2e-08 62.0 88 31.8
Prupe.3G094000 Prunus persica HOM05D001576 ORTHO05D000401 8.2e-08 62.0 275 25.8
QL10p048988 Quercus lobata HOM05D001576 ORTHO05D000401 1.4e-07 61.2 266 24.1
Os07g0554400 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 1.8e-07 60.8 93 35.5
PSO832G0249 Papaver somniferum HOM05D008413 ORTHO05D000401 2.4e-07 60.5 61 49.2
Dinv28075 Davidia involucrata HOM05D009738 ORTHO05D011821 3.1e-07 60.1 102 34.3
QL09p040841 Quercus lobata HOM05D001576 ORTHO05D000401 3.1e-07 60.1 246 25.2
Aqoxy6G02363 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 4.1e-07 59.7 199 23.1
Dinv16230 Davidia involucrata HOM05D009738 ORTHO05D011821 6.9e-07 58.9 105 33.3
Rhsim08G0115200 Rhododendron simsii HOM05D007743 ORTHO05D004645 6.9e-07 58.9 260 24.2
Zm00001eb283200 Zea mays HOM05D000011 ORTHO05D000157 6.9e-07 58.9 256 24.2
Os05g0227800 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 9.0e-07 58.5 95 32.6
vmacro13746 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 9.0e-07 58.5 267 24.3
Rhsim03G0135600 Rhododendron simsii HOM05D001576 ORTHO05D010219 4.5e-06 56.2 260 27.3
ECA233G2970 Erigeron canadensis HOM05D006295 ORTHO05D008061 1.0e-05 55.1 98 29.6
QL05p011416 Quercus lobata HOM05D001576 ORTHO05D016378 1.0e-05 55.1 194 26.8


User provided reference genes

Program Settings