Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold618G53217 Striga asiatica HOM05D021043 ORTHO05D009014 1.4e-173 612.8 314 100.0
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 5.4e-88 328.6 415 48.4
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 2.9e-65 253.1 476 39.5
SGA_v2.0_scaffold158G37500 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-64 251.1 251 57.4
SGA_v2.0_scaffold6G03342 Striga asiatica HOM05D006612 ORTHO05D009014 7.6e-42 175.3 92 96.7
SGA_v2.0_scaffold1G00564 Striga asiatica HOM05D006612 ORTHO05D009014 5.1e-38 162.5 134 63.4
SGA_v2.0_scaffold32G13336 Striga asiatica HOM05D021043 ORTHO05D009014 4.6e-31 139.4 185 42.7
SGA_v2.0_scaffold24G10704 Striga asiatica HOM05D021043 ORTHO05D009014 6.1e-31 139.0 185 42.7
SGA_v2.0_scaffold53G19313 Striga asiatica HOM05D021043 ORTHO05D009014 7.9e-31 138.7 185 42.2
SGA_v2.0_scaffold46G17409 Striga asiatica HOM05D021043 ORTHO05D399715 1.0e-25 121.7 198 37.4
SGA_v2.0_scaffold154G37090 Striga asiatica HOM05D006612 ORTHO05D009014 6.7e-22 109.0 322 27.6
SGA_v2.0_scaffold87G27151 Striga asiatica HOM05D006612 ORTHO05D009014 9.7e-21 105.1 205 38.5
SGA_v2.0_scaffold4G02280 Striga asiatica HOM05D021043 ORTHO05D009014 8.2e-20 102.1 185 37.3
SGA_v2.0_scaffold1G00025 Striga asiatica HOM05D006612 ORTHO05D009014 2.6e-18 97.1 321 26.8
SGA_v2.0_scaffold319G48529 Striga asiatica HOM05D006612 ORTHO05D009014 7.7e-18 95.5 112 51.8
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 2.9e-17 93.6 351 24.2
SGA_v2.0_scaffold146G36211 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-17 93.2 275 27.3
SGA_v2.0_scaffold1G00633 Striga asiatica HOM05D006612 ORTHO05D009014 6.5e-17 92.4 104 42.3
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 3.2e-16 90.1 81 49.4
SGA_v2.0_scaffold52G19153 Striga asiatica HOM05D006612 ORTHO05D009014 3.2e-16 90.1 241 29.0
SGA_v2.0_scaffold144G35921 Striga asiatica HOM05D006612 ORTHO05D009014 4.2e-16 89.7 81 54.3
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 5.5e-16 89.4 81 46.9
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-15 87.8 80 48.8
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-15 87.8 388 22.2
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-15 87.4 81 50.6
SGA_v2.0_scaffold1575G53988 Striga asiatica HOM05D006612 ORTHO05D404833 4.7e-15 86.3 159 37.7
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 7.9e-15 85.5 81 48.1
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 7.9e-15 85.5 81 48.1
SGA_v2.0_scaffold19G08855 Striga asiatica HOM05D006612 ORTHO05D009014 1.0e-14 85.1 240 25.4
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-14 84.7 81 53.1
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 4.4e-13 79.7 101 38.6
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 7.4e-13 79.0 81 46.9
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 2.8e-12 77.0 83 44.6
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-11 74.7 120 32.5
Cc07_g15780 Coffea canephora HOM05D006612 ORTHO05D009014 2.4e-11 73.9 81 40.7
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 2.4e-11 73.9 81 38.3
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 2.0e-10 70.9 196 22.4
Cc09_g02240 Coffea canephora HOM05D006612 ORTHO05D009014 2.6e-10 70.5 93 36.6
SGA_v2.0_scaffold263G45988 Striga asiatica HOM05D006612 ORTHO05D009014 5.0e-09 66.2 80 42.5
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 5.0e-09 66.2 81 40.7
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 6.5e-09 65.9 97 34.0
Cc11_g04430 Coffea canephora HOM05D006612 ORTHO05D009014 8.5e-09 65.5 81 39.5
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-08 65.1 314 24.2
Lsat_1_v5_gn_1_29400 Lactuca sativa HOM05D006612 ORTHO05D009014 1.5e-08 64.7 94 30.9
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-08 63.9 79 39.2
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 3.2e-08 63.5 94 35.1
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-07 60.8 97 34.0
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.7e-07 59.7 97 30.9
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 4.7e-07 59.7 177 29.4
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 4.7e-07 59.7 66 40.9
Lsat_1_v5_gn_8_167080 Lactuca sativa HOM05D006612 ORTHO05D009014 4.0e-06 56.6 105 28.6
SGA_v2.0_scaffold1G00207 Striga asiatica HOM05D006612 ORTHO05D009014 5.2e-06 56.2 67 44.8
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 6.7e-06 55.8 101 31.7


User provided reference genes

Program Settings