Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold60G21123 Striga asiatica HOM05D006127 ORTHO05D007465 1.8e-309 1065.1 539 100.0
MSTRG.8699 Avicennia marina HOM05D006127 ORTHO05D007465 3.1e-208 728.8 561 69.5
Migut.F00277 Erythranthe guttata HOM05D006127 ORTHO05D007465 1.6e-193 679.9 568 66.0
COL.COLO4_30292 Corchorus olitorius HOM05D006127 ORTHO05D007465 4.1e-168 595.5 563 59.1
CSS0002355 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 3.8e-166 589.0 563 58.4
Dinv35267 Davidia involucrata HOM05D006127 ORTHO05D007465 9.4e-165 584.3 573 57.6
CSS0021566 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 2.7e-164 582.8 567 58.0
Thecc.03G186000 Theobroma cacao HOM05D006127 ORTHO05D007465 2.7e-164 582.8 562 58.5
Gorai.003G069400 Gossypium raimondii HOM05D006127 ORTHO05D007465 3.9e-163 578.9 563 57.7
Gohir.D11G229300 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.5e-162 577.0 563 57.5
Atru.chr1.338 Acer truncatum HOM05D006127 ORTHO05D007465 3.3e-162 575.9 537 59.0
Gohir.A11G225200 Gossypium hirsutum HOM05D006127 ORTHO05D007465 3.1e-160 569.3 563 57.4
unitig_747.g21859 Utricularia gibba HOM05D006127 ORTHO05D007465 2.0e-159 566.6 554 59.0
Ciclev10004691m.g Citrus clementina HOM05D006127 ORTHO05D007465 3.4e-159 565.8 553 57.5
Actinidia34165 Actinidia chinensis HOM05D006127 ORTHO05D007465 4.5e-159 565.5 575 58.4
Sabra17G0124200 Salix brachista HOM05D006127 ORTHO05D007465 4.2e-157 558.9 564 55.5
MD07G1280200 Malus domestica HOM05D006127 ORTHO05D007465 2.7e-156 556.2 555 55.5
Manes.06G153500 Manihot esculenta HOM05D006127 ORTHO05D007465 2.7e-156 556.2 566 55.5
Potri.017G148900 Populus trichocarpa HOM05D006127 ORTHO05D007465 7.9e-156 554.7 560 55.2
QL09p012458 Quercus lobata HOM05D006127 ORTHO05D007465 1.4e-155 553.9 550 56.7
CAN.G236.3 Capsicum annuum HOM05D006127 ORTHO05D007465 3.0e-155 552.7 469 64.4
Nitab4.5_0000472g0230 Nicotiana tabacum HOM05D006127 ORTHO05D007465 3.0e-155 552.7 474 63.9
PGSC0003DMG400009503 Solanum tuberosum HOM05D006127 ORTHO05D007465 5.1e-155 552.0 472 64.0
THA.LOC104818243 Tarenaya hassleriana HOM05D006127 ORTHO05D007465 6.7e-155 551.6 556 57.2
Prupe.2G302400 Prunus persica HOM05D006127 ORTHO05D007465 1.5e-154 550.4 559 56.2
TWI23G0320 Tripterygium wilfordii HOM05D006127 ORTHO05D007465 7.4e-154 548.1 548 56.2
Solyc03g007620.3 Solanum lycopersicum HOM05D006127 ORTHO05D007465 1.7e-153 547.0 472 63.3
PGR044G2596 Punica granatum HOM05D006127 ORTHO05D007465 2.2e-153 546.6 570 55.8
Sopen03g003570 Solanum pennellii HOM05D006127 ORTHO05D007465 3.7e-153 545.8 472 63.3
Lj2g0027649 Lotus japonicus HOM05D006127 ORTHO05D007465 6.3e-153 545.0 558 55.2
Cfa016302 Carpinus fangiana HOM05D006127 ORTHO05D007465 8.2e-153 544.7 554 56.5
Peaxi162Scf00444g00314 Petunia axillaris HOM05D006127 ORTHO05D007465 3.1e-152 542.7 472 63.3
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 4.1e-152 542.3 579 54.9
Nitab4.5_0001331g0020 Nicotiana tabacum HOM05D006127 ORTHO05D007465 5.3e-152 542.0 481 61.5
Potri.004G072100 Populus trichocarpa HOM05D006127 ORTHO05D007465 5.3e-152 542.0 514 58.8
Eucgr.A02719 Eucalyptus grandis HOM05D006127 ORTHO05D007465 4.5e-151 538.9 560 54.3
HanXRQChr00c0486g0575011 Helianthus annuus HOM05D006127 ORTHO05D007465 5.9e-151 538.5 563 53.3
Carub.0008s2341 Capsella rubella HOM05D006127 ORTHO05D007465 5.0e-150 535.4 551 56.1
MD01G1210100 Malus domestica HOM05D006127 ORTHO05D007465 8.5e-150 534.6 554 54.9
Ca_26803_v3 Cicer arietinum L. HOM05D006127 ORTHO05D007465 3.2e-149 532.7 559 53.1
Medtr6g053110 Medicago truncatula HOM05D006127 ORTHO05D007465 5.5e-149 531.9 554 55.4
Phvul.004G105900 Phaseolus vulgaris HOM05D006127 ORTHO05D007465 1.2e-148 530.8 556 54.3
TAR374G0777 Trochodendron aralioides HOM05D006127 ORTHO05D007465 1.2e-148 530.8 458 60.9
Thhalv10003967m.g Eutrema salsugineum HOM05D006127 ORTHO05D007465 1.6e-148 530.4 553 56.4
Sp2g25830 Schrenkiella parvula HOM05D006127 ORTHO05D007465 2.7e-148 529.6 555 56.0
CARHR276460 Cardamine hirsuta HOM05D006127 ORTHO05D007465 3.6e-148 529.3 545 56.0
Glyma.09G129300 Glycine max HOM05D006127 ORTHO05D007465 3.6e-148 529.3 553 54.2
AT5G62650 Arabidopsis thaliana HOM05D006127 ORTHO05D007465 1.8e-147 526.9 555 55.5
ECA232G4568 Erigeron canadensis HOM05D006127 ORTHO05D007465 2.3e-147 526.6 486 58.2
Lj1A1007G54 Lonicera japonica HOM05D006127 ORTHO05D007465 2.3e-147 526.6 477 60.2
Sabra04G0047500 Salix brachista HOM05D006127 ORTHO05D007465 2.3e-147 526.6 590 52.9
Lalb_Chr01g0009501 Lupinus albus HOM05D006127 ORTHO05D007465 3.9e-147 525.8 541 57.3
Haze_00059 Corylus avellana HOM05D006127 ORTHO05D007465 8.8e-147 524.6 535 57.0
AL8G39630 Arabidopsis lyrata HOM05D006127 ORTHO05D007465 2.0e-146 523.5 551 55.5
CiPaw.06G004100 Carya illinoinensis HOM05D006127 ORTHO05D007465 1.3e-145 520.8 544 55.3
Sc13g0009280 Simmondsia chinensis HOM05D006127 ORTHO05D007465 3.7e-145 519.2 500 56.4
A06p29390 Brassica napus HOM05D006127 ORTHO05D007465 2.4e-144 516.5 551 54.8
BraA06t25889Z Brassica rapa HOM05D006127 ORTHO05D007465 2.4e-144 516.5 553 56.4
FAN06G1782 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.4e-144 516.5 524 55.5
Aa31LG11G990 Aethionema arabicum HOM05D006127 ORTHO05D007465 4.1e-144 515.8 564 52.7
BcaC01g02503 Brassica carinata HOM05D006127 ORTHO05D007465 4.1e-144 515.8 553 56.2
FAN03G2078 Fragaria x ananassa HOM05D006127 ORTHO05D007465 7.0e-144 515.0 524 55.3
FAN10G2357 Fragaria x ananassa HOM05D006127 ORTHO05D007465 7.0e-144 515.0 556 54.1
FAN03G3352 Fragaria x ananassa HOM05D006127 ORTHO05D007465 9.1e-144 514.6 524 55.3
FAN06G3350 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.2e-143 514.2 524 55.3
Cc02_g02250 Coffea canephora HOM05D006127 ORTHO05D007465 2.0e-143 513.5 432 62.5
CiPaw.05G261300 Carya illinoinensis HOM05D006127 ORTHO05D007465 2.6e-143 513.1 445 60.7
FAN10G0315 Fragaria x ananassa HOM05D006127 ORTHO05D007465 5.9e-143 511.9 524 55.2
RcHm_v2.0_Chr1g0378611 Rosa chinensis HOM05D006127 ORTHO05D007465 1.0e-142 511.1 546 54.2
C03p64120 Brassica napus HOM05D006127 ORTHO05D007465 1.7e-142 510.4 552 56.0
BolC3t18667H Brassica oleracea HOM05D006127 ORTHO05D007465 1.7e-142 510.4 553 56.1
arahy.Tifrunner.gnm1.ann1.AR9FJK Arachis hypogaea HOM05D006127 ORTHO05D007465 6.5e-142 508.4 553 53.9
arahy.Tifrunner.gnm1.ann1.HXNP43 Arachis hypogaea HOM05D006127 ORTHO05D007465 8.5e-142 508.1 553 53.5
Oeu003330.1 Olea europaea HOM05D006127 ORTHO05D007465 2.5e-141 506.5 418 62.0
Gorai.006G199600 Gossypium raimondii HOM05D006127 ORTHO05D007465 3.2e-141 506.1 479 56.8
PSO478G4852 Papaver somniferum HOM05D006127 ORTHO05D007465 3.2e-141 506.1 576 51.4
CsaV3_5G001020 Cucumis sativus L. HOM05D006127 ORTHO05D007465 7.2e-141 505.0 548 52.9
Lsat_1_v5_gn_9_56840 Lactuca sativa HOM05D006127 ORTHO05D007465 8.0e-140 501.5 555 52.4
Gohir.D09G177600 Gossypium hirsutum HOM05D006127 ORTHO05D007465 2.3e-139 500.0 557 51.5
BcaB02g09667 Brassica carinata HOM05D006127 ORTHO05D007465 1.2e-138 497.7 560 53.9
HanXRQChr15g0494171 Helianthus annuus HOM05D006127 ORTHO05D007465 3.3e-138 496.1 557 51.9
MELO3C005842.2 Cucumis melo HOM05D006127 ORTHO05D007465 9.7e-138 494.6 555 52.3
Gohir.A09G182900 Gossypium hirsutum HOM05D006127 ORTHO05D007465 9.7e-138 494.6 545 51.6
PSO266G0017 Papaver somniferum HOM05D006127 ORTHO05D007465 2.8e-137 493.0 575 49.6
ClCG01G000890 Citrullus lanatus HOM05D006127 ORTHO05D007465 9.1e-136 488.0 556 52.9
Cpa.g.sc107.127 Carica papaya HOM05D006127 ORTHO05D007465 1.2e-135 487.6 466 58.2
Sed0008008 Sechium edule HOM05D006127 ORTHO05D007465 7.7e-135 485.0 568 50.9
Glyma.16G177100 Glycine max HOM05D006127 ORTHO05D007465 3.2e-133 479.6 547 51.0
Aqoxy7G00200 Aquilegia oxysepala HOM05D006127 ORTHO05D007465 1.4e-131 474.2 482 54.6
EL10Ac3g05405 Beta vulgaris HOM05D006127 ORTHO05D007465 2.3e-131 473.4 564 50.4
Nn6g32416 Nelumbo nucifera HOM05D006127 ORTHO05D007465 5.2e-131 472.2 519 53.6
DCAR_008898 Daucus carota HOM05D006127 ORTHO05D007465 2.0e-130 470.3 540 51.5
AUR62031438 Chenopodium quinoa HOM05D006127 ORTHO05D007465 3.4e-130 469.5 448 57.1
GSVIVG01028824001 Vitis vinifera HOM05D006127 ORTHO05D007465 1.6e-127 460.7 426 57.0
Rhsim03G0192200 Rhododendron simsii HOM05D006127 ORTHO05D007465 2.5e-125 453.4 561 49.4
Ah.07g206460 Amaranthus hybridus HOM05D006127 ORTHO05D007465 8.9e-123 444.9 546 48.9
Hund04798 Selenicereus undatus HOM05D006127 ORTHO05D007465 2.0e-122 443.7 696 42.7
vmacro06616 Vaccinium macrocarpon HOM05D006127 ORTHO05D007465 2.0e-122 443.7 565 48.3
ATR0721G168 Amborella trichopoda HOM05D006127 ORTHO05D007465 2.2e-121 440.3 535 48.6
CDE04G3725 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 6.3e-121 438.7 515 48.3
SGA_v2.0_scaffold192G40622 Striga asiatica HOM05D006127 ORTHO05D007465 2.9e-118 429.9 241 90.5
Zm00001eb119480 Zea mays HOM05D006127 ORTHO05D007465 9.5e-117 424.9 546 46.3
TPR.G9177 Trifolium pratense HOM05D006127 ORTHO05D007465 1.1e-112 411.4 344 62.5
FvH4_7g30450 Fragaria vesca HOM05D006127 ORTHO05D007465 1.4e-112 411.0 374 59.9
Psat0s2186g0040 Pisum sativum HOM05D006127 ORTHO05D007465 1.4e-112 411.0 396 57.6
HPP92_008801 Vanilla planifolia HOM05D006127 ORTHO05D007465 2.5e-109 400.2 541 45.1
Ah.13g069260 Amaranthus hybridus HOM05D006127 ORTHO05D007465 4.3e-109 399.4 412 53.2
AUR62021102 Chenopodium quinoa HOM05D006127 ORTHO05D007465 1.6e-108 397.5 448 51.3
Oeu027861.1 Olea europaea HOM05D006127 ORTHO05D007465 7.3e-93 345.5 436 48.9
Nn1g01683 Nelumbo nucifera HOM05D006127 ORTHO05D007465 4.3e-85 319.7 501 42.9
BcaB02g09671 Brassica carinata HOM05D006127 ORTHO05D007465 2.1e-84 317.4 532 44.7
VMungo0464G0768 Vigna mungo HOM05D006127 ORTHO05D007465 1.4e-83 314.7 321 54.2
HPP92_005266 Vanilla planifolia HOM05D006127 ORTHO05D007465 2.5e-77 293.9 375 46.1
CDE03G0317 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 5.1e-70 269.6 236 55.9
FAN01G1207 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.9e-61 241.1 221 59.3
Os01g0225300 Oryza sativa ssp. japonica HOM05D006127 ORTHO05D007465 5.7e-61 239.6 293 46.8
AagrBONN_evm.TU.Sc2ySwM_368.2100 Anthoceros agrestis HOM05D006127 ORTHO05D007465 2.2e-57 227.6 461 34.7
Mapoly0009s0032 Marchantia polymorpha HOM05D006127 ORTHO05D007465 4.2e-56 223.4 532 32.3
Pp3c17_22580 Physcomitrium patens HOM05D006127 ORTHO05D007465 2.3e-46 191.0 535 28.6
arahy.Tifrunner.gnm1.ann1.KML1I1 Arachis hypogaea HOM05D006127 ORTHO05D007465 2.7e-39 167.5 253 41.9
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.0e-30 137.5 74 85.1
SEGI_03634 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 1.1e-29 135.6 189 43.4
Cfa002216 Carpinus fangiana HOM05D006127 ORTHO05D007465 1.5e-24 118.6 249 36.1
SMO266G0103 Selaginella moellendorffii HOM05D006127 ORTHO05D007465 3.2e-24 117.5 195 35.9
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 3.6e-23 114.0 62 80.6
TPR.G27774 Trifolium pratense HOM05D006127 ORTHO05D007465 2.6e-21 107.8 178 42.7
SEGI_25179 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 1.8e-14 85.1 72 56.9
TPR.G9175 Trifolium pratense HOM05D006127 ORTHO05D007465 1.5e-13 82.0 67 56.7
Ah.13g069250 Amaranthus hybridus HOM05D006127 ORTHO05D007465 2.0e-13 81.6 157 42.7


User provided reference genes

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