Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold60G21098 Striga asiatica HOM05D004420 ORTHO05D005048 3.0e-160 568.5 304 100.0
Oeu045734.2 Olea europaea HOM05D004420 ORTHO05D005048 4.2e-53 212.6 320 46.2
Oeu043391.2 Olea europaea HOM05D004420 ORTHO05D005048 2.1e-44 183.7 338 41.1
Actinidia17355 Actinidia chinensis HOM05D004420 ORTHO05D005048 1.9e-42 177.2 324 44.1
Migut.F01091 Erythranthe guttata HOM05D004420 ORTHO05D005048 3.3e-42 176.4 292 44.2
CSS0016949 Camellia sinensis var. sinensis HOM05D004420 ORTHO05D005048 2.8e-41 173.3 319 41.7
CSS0044881 Camellia sinensis var. sinensis HOM05D004420 ORTHO05D005048 2.8e-41 173.3 319 41.7
Nitab4.5_0004608g0040 Nicotiana tabacum HOM05D004420 ORTHO05D005048 2.8e-41 173.3 326 41.1
Lj2P500T27 Lonicera japonica HOM05D004420 ORTHO05D005048 3.1e-40 169.9 340 40.0
Dinv40193 Davidia involucrata HOM05D004420 ORTHO05D005048 6.9e-40 168.7 278 45.3
Phvul.003G270300 Phaseolus vulgaris HOM05D004420 ORTHO05D005048 1.5e-39 167.5 315 40.6
TWI53G1718 Tripterygium wilfordii HOM05D004420 ORTHO05D005048 2.0e-39 167.2 323 41.5
SalBow2G0301 Salvia bowleyana HOM05D004420 ORTHO05D005048 3.4e-39 166.4 331 39.9
SalBow2G0742 Salvia bowleyana HOM05D004420 ORTHO05D005048 3.4e-39 166.4 331 39.9
unitig_46.g18801 Utricularia gibba HOM05D004420 ORTHO05D005048 7.6e-39 165.2 304 40.8
Ciclev10025852m.g Citrus clementina HOM05D004420 ORTHO05D005048 1.3e-38 164.5 319 42.0
TWI09G0210 Tripterygium wilfordii HOM05D004420 ORTHO05D005048 1.3e-38 164.5 322 43.2
vmacro20627 Vaccinium macrocarpon HOM05D004420 ORTHO05D005048 1.3e-38 164.5 309 41.1
Actinidia22893 Actinidia chinensis HOM05D004420 ORTHO05D005048 1.7e-38 164.1 332 40.1
Hma1.2p1_0085F.1_g044630 Hydrangea macrophylla HOM05D004420 ORTHO05D005048 3.8e-38 162.9 328 43.6
CAN.G1238.15 Capsicum annuum HOM05D004420 ORTHO05D005048 5.0e-38 162.5 319 40.1
Rhsim10G0195100 Rhododendron simsii HOM05D004420 ORTHO05D005048 6.5e-38 162.2 297 41.1
PGSC0003DMG400001515 Solanum tuberosum HOM05D004420 ORTHO05D005048 6.5e-38 162.2 326 39.6
VMungo0251G1478 Vigna mungo HOM05D004420 ORTHO05D005048 3.2e-37 159.8 315 39.4
CSS0013805 Camellia sinensis var. sinensis HOM05D004420 ORTHO05D005048 9.3e-37 158.3 331 40.2
Phvul.002G117000 Phaseolus vulgaris HOM05D004420 ORTHO05D005048 1.2e-36 157.9 310 41.9
Nitab4.5_0001467g0050 Nicotiana tabacum HOM05D004420 ORTHO05D005048 1.6e-36 157.5 326 39.0
Prupe.7G183600 Prunus persica HOM05D004420 ORTHO05D005048 3.5e-36 156.4 323 40.6
Glyma.01G158300 Glycine max HOM05D004420 ORTHO05D005048 4.6e-36 156.0 309 40.1
Hma1.2p1_0300F.1_g117950 Hydrangea macrophylla HOM05D004420 ORTHO05D005048 4.6e-36 156.0 304 41.8
Sopen02g027250 Solanum pennellii HOM05D004420 ORTHO05D005048 4.6e-36 156.0 326 39.0
VMungo1215G0928 Vigna mungo HOM05D004420 ORTHO05D005048 4.6e-36 156.0 356 37.4
Dinv40192 Davidia involucrata HOM05D004420 ORTHO05D005048 6.1e-36 155.6 307 40.7
Glyma.16G111400 Glycine max HOM05D004420 ORTHO05D005048 1.5e-34 151.0 310 39.4
Actinidia35683 Actinidia chinensis HOM05D004420 ORTHO05D005048 3.3e-34 149.8 306 39.5
Psat4g103680 Pisum sativum HOM05D004420 ORTHO05D005048 9.7e-34 148.3 322 38.5
Glyma.11G086400 Glycine max HOM05D004420 ORTHO05D005048 2.8e-33 146.7 305 39.3
Migut.F00308 Erythranthe guttata HOM05D004420 ORTHO05D005048 3.7e-33 146.4 286 42.7
Ca_02853_v3 Cicer arietinum L. HOM05D004420 ORTHO05D005048 8.2e-33 145.2 311 39.9
arahy.Tifrunner.gnm1.ann1.7Y7MXI Arachis hypogaea HOM05D004420 ORTHO05D005048 1.1e-32 144.8 323 36.5
arahy.Tifrunner.gnm1.ann1.PTZ9GF Arachis hypogaea HOM05D004420 ORTHO05D005048 1.1e-32 144.8 323 36.5
Cfa007085 Carpinus fangiana HOM05D004420 ORTHO05D005048 1.4e-32 144.4 335 36.1
CiPaw.08G182000 Carya illinoinensis HOM05D004420 ORTHO05D005048 1.8e-32 144.1 314 36.6
PGR119G1834 Punica granatum HOM05D004420 ORTHO05D005048 3.1e-32 143.3 303 38.9
Glyma.09G197900 Glycine max HOM05D004420 ORTHO05D005048 9.0e-32 141.7 312 37.8
Manes.01G155700 Manihot esculenta HOM05D004420 ORTHO05D005048 9.0e-32 141.7 341 37.8
Cpa.g.sc6.366 Carica papaya HOM05D004420 ORTHO05D005048 2.0e-31 140.6 314 36.6
Duzib147G0341 Durio zibethinus HOM05D004420 ORTHO05D005048 2.6e-31 140.2 326 36.5
Cc07_g11920 Coffea canephora HOM05D004420 ORTHO05D005048 3.4e-31 139.8 322 35.7
Lj2g0010108 Lotus japonicus HOM05D004420 ORTHO05D005048 3.4e-31 139.8 304 37.5
Actinidia28747 Actinidia chinensis HOM05D004420 ORTHO05D005048 1.0e-30 138.3 326 38.0
SGA_v2.0_scaffold10G05298 Striga asiatica HOM05D004420 ORTHO05D005048 2.9e-30 136.7 283 41.7
FvH4_1g10260 Fragaria vesca HOM05D004420 ORTHO05D005048 3.8e-30 136.3 322 37.3
FAN19G0089 Fragaria x ananassa HOM05D004420 ORTHO05D005048 3.8e-30 136.3 322 37.3
FAN26G2737 Fragaria x ananassa HOM05D004420 ORTHO05D005048 3.8e-30 136.3 322 37.3
Ah.03g142860 Amaranthus hybridus HOM05D004420 ORTHO05D005048 5.0e-30 136.0 324 38.9
DCAR_014284 Daucus carota HOM05D004420 ORTHO05D005048 6.5e-30 135.6 303 39.9
DCAR_014308 Daucus carota HOM05D004420 ORTHO05D005048 6.5e-30 135.6 303 39.9
Solyc03g032100.2 Solanum lycopersicum HOM05D004420 ORTHO05D005048 6.5e-30 135.6 305 37.7
QL06p053029 Quercus lobata HOM05D004420 ORTHO05D005048 8.5e-30 135.2 331 35.3
Peaxi162Scf00121g00249 Petunia axillaris HOM05D004420 ORTHO05D005048 1.1e-29 134.8 326 37.4
Manes.02G114400 Manihot esculenta HOM05D004420 ORTHO05D005048 1.4e-29 134.4 337 36.8
Sopen03g005950 Solanum pennellii HOM05D004420 ORTHO05D005048 1.9e-29 134.0 305 37.7
FAN23G0043 Fragaria x ananassa HOM05D004420 ORTHO05D005048 2.5e-29 133.7 322 37.0
COL.COLO4_22555 Corchorus olitorius HOM05D004420 ORTHO05D005048 3.2e-29 133.3 318 37.1
RcHm_v2.0_Chr2g0097081 Rosa chinensis HOM05D004420 ORTHO05D005048 4.2e-29 132.9 324 37.7
CsaV3_3G000180 Cucumis sativus L. HOM05D004420 ORTHO05D005048 7.2e-29 132.1 313 36.4
Gorai.001G199300 Gossypium raimondii HOM05D004420 ORTHO05D005048 7.2e-29 132.1 318 36.5
Lalb_Chr09g0324761 Lupinus albus HOM05D004420 ORTHO05D005048 7.2e-29 132.1 348 34.5
Potri.005G102000 Populus trichocarpa HOM05D004420 ORTHO05D005048 1.6e-28 131.0 328 37.5
Gohir.D07G178200 Gossypium hirsutum HOM05D004420 ORTHO05D005048 2.7e-28 130.2 318 36.2
Potri.007G063000 Populus trichocarpa HOM05D004420 ORTHO05D005048 2.7e-28 130.2 331 36.6
MELO3C013712.2 Cucumis melo HOM05D004420 ORTHO05D005048 6.1e-28 129.0 313 36.7
Medtr8g073305 Medicago truncatula HOM05D004420 ORTHO05D005048 6.1e-28 129.0 314 36.9
Lj4P237T30 Lonicera japonica HOM05D004420 ORTHO05D005048 7.9e-28 128.6 309 36.6
TPR.G13730 Trifolium pratense HOM05D004420 ORTHO05D005048 2.3e-27 127.1 315 35.6
Thecc.01G004900 Theobroma cacao HOM05D004420 ORTHO05D005048 3.0e-27 126.7 342 33.0
Gohir.A07G173800 Gossypium hirsutum HOM05D004420 ORTHO05D005048 3.9e-27 126.3 318 35.5
Eucgr.I02220 Eucalyptus grandis HOM05D004420 ORTHO05D005048 5.1e-27 125.9 298 36.6
Sabra05G0084400 Salix brachista HOM05D004420 ORTHO05D005048 6.7e-27 125.6 329 37.4
Carub.0007s0482 Capsella rubella HOM05D004420 ORTHO05D005048 1.5e-26 124.4 338 34.6
HanXRQChr16g0531901 Helianthus annuus HOM05D004420 ORTHO05D005048 2.0e-26 124.0 286 37.1
ClCG10G000160 Citrullus lanatus HOM05D004420 ORTHO05D005048 2.5e-26 123.6 313 37.7
MD02G1114600 Malus domestica HOM05D004420 ORTHO05D005048 3.3e-26 123.2 332 36.4
Aqoxy6G01610 Aquilegia oxysepala HOM05D004420 ORTHO05D005048 5.7e-26 122.5 332 35.8
HanXRQChr16g0531911 Helianthus annuus HOM05D004420 ORTHO05D005048 5.7e-26 122.5 286 37.1
MD15G1230400 Malus domestica HOM05D004420 ORTHO05D005048 7.4e-26 122.1 330 36.7
AUR62002052 Chenopodium quinoa HOM05D004420 ORTHO05D005048 1.7e-25 120.9 291 38.5
Lalb_Chr05g0214821 Lupinus albus HOM05D004420 ORTHO05D005048 4.8e-25 119.4 336 33.3
CAN.G354.13 Capsicum annuum HOM05D004420 ORTHO05D005048 8.2e-25 118.6 298 38.6
CiPaw.07G002200 Carya illinoinensis HOM05D004420 ORTHO05D005048 8.2e-25 118.6 349 32.7
THA.LOC104819714 Tarenaya hassleriana HOM05D004420 ORTHO05D005048 1.1e-24 118.2 318 35.2
CANSAT25G3726 Cannabis sativa HOM05D004420 ORTHO05D005048 1.4e-24 117.9 318 34.3
GSVIVG01022291001 Vitis vinifera HOM05D004420 ORTHO05D005048 2.4e-24 117.1 278 37.1
Aa31LG8G14840 Aethionema arabicum HOM05D004420 ORTHO05D005048 3.1e-24 116.7 315 33.7
Carub.0003s3163 Capsella rubella HOM05D004420 ORTHO05D005048 3.1e-24 116.7 298 34.9
Lsat_1_v5_gn_8_112420 Lactuca sativa HOM05D004420 ORTHO05D005048 4.1e-24 116.3 290 35.5
EL10Ac6g15050 Beta vulgaris HOM05D004420 ORTHO05D005048 6.9e-24 115.5 313 35.8
Sed0027819 Sechium edule HOM05D004420 ORTHO05D005048 6.9e-24 115.5 318 35.8
AL3G50510 Arabidopsis lyrata HOM05D004420 ORTHO05D005048 1.2e-23 114.8 305 33.4
AT4G35510 Arabidopsis thaliana HOM05D004420 ORTHO05D005048 1.2e-23 114.8 290 36.9
Lalb_Chr09g0334351 Lupinus albus HOM05D004420 ORTHO05D005048 1.5e-23 114.4 304 34.2
Gohir.D03G001500 Gossypium hirsutum HOM05D004420 ORTHO05D005048 2.6e-23 113.6 330 33.3
Sc07g0001390 Simmondsia chinensis HOM05D004420 ORTHO05D005048 3.4e-23 113.2 333 33.9
Duzib264G0151 Durio zibethinus HOM05D004420 ORTHO05D005048 5.9e-23 112.5 355 32.1
Sabra07G0052400 Salix brachista HOM05D004420 ORTHO05D005048 5.9e-23 112.5 302 38.1
Gorai.003G001900 Gossypium raimondii HOM05D004420 ORTHO05D005048 7.7e-23 112.1 332 32.8
unitig_52.g17736 Utricularia gibba HOM05D004420 ORTHO05D005048 7.7e-23 112.1 185 43.2
Gohir.A02G178300 Gossypium hirsutum HOM05D004420 ORTHO05D005048 1.0e-22 111.7 336 33.0
Ah.02g123000 Amaranthus hybridus HOM05D000464 ORTHO05D005048 1.3e-22 111.3 328 35.7
PGSC0003DMG400018682 Solanum tuberosum HOM05D004420 ORTHO05D005048 2.9e-22 110.2 308 34.7
Lj4g0016332 Lotus japonicus HOM05D004420 ORTHO05D005048 6.5e-22 109.0 335 34.9
ECA246G3765 Erigeron canadensis HOM05D004420 ORTHO05D005048 1.4e-21 107.8 319 34.2
TAR381G0338 Trochodendron aralioides HOM05D004420 ORTHO05D005048 4.2e-21 106.3 313 32.9
CARHR243840 Cardamine hirsuta HOM05D004420 ORTHO05D005048 5.5e-21 105.9 330 32.7
Sp3g30900 Schrenkiella parvula HOM05D004420 ORTHO05D005048 1.2e-20 104.8 290 34.8
THA.LOC104807425 Tarenaya hassleriana HOM05D004420 ORTHO05D005048 2.1e-20 104.0 332 33.4
AL7G15660 Arabidopsis lyrata HOM05D004420 ORTHO05D005048 2.7e-20 103.6 291 35.7
TAR376G0940 Trochodendron aralioides HOM05D004420 ORTHO05D005048 3.6e-20 103.2 319 33.5
Peaxi162Scf00580g00013 Petunia axillaris HOM05D004420 ORTHO05D005048 4.7e-20 102.8 196 43.4
Atru.chr3.127 Acer truncatum HOM05D004420 ORTHO05D005048 7.9e-20 102.1 319 32.6
Nn6g31686 Nelumbo nucifera HOM05D004420 ORTHO05D005048 7.9e-20 102.1 302 36.4
BcaB03g16523 Brassica carinata HOM05D004420 ORTHO05D005048 1.8e-19 100.9 268 36.6
AUR62003743 Chenopodium quinoa HOM05D004420 ORTHO05D005048 3.0e-19 100.1 218 40.4
Eucgr.J02539 Eucalyptus grandis HOM05D004420 ORTHO05D005048 6.7e-19 99.0 187 41.7
Solyc02g082570.3 Solanum lycopersicum HOM05D004420 ORTHO05D005048 1.5e-18 97.8 149 45.0
PSO210G4741 Papaver somniferum HOM05D004420 ORTHO05D005048 5.7e-18 95.9 309 31.1
CDE05G3647 Ceratophyllum demersum HOM05D004420 ORTHO05D005048 7.4e-18 95.5 337 30.0
BcaB08g34743 Brassica carinata HOM05D004420 ORTHO05D005048 6.3e-17 92.4 273 33.7
A06p33900 Brassica napus HOM05D004420 ORTHO05D005048 6.3e-17 92.4 265 33.6
BraA06t26325Z Brassica rapa HOM05D004420 ORTHO05D005048 1.1e-16 91.7 265 34.0
C07p05740 Brassica napus HOM05D004420 ORTHO05D005048 3.1e-16 90.1 270 34.8
Thhalv10025668m.g Eutrema salsugineum HOM05D004420 ORTHO05D005048 3.1e-16 90.1 295 34.6
PSO761G0558 Papaver somniferum HOM05D004420 ORTHO05D005048 4.1e-16 89.7 309 30.7
TAR625G1485 Trochodendron aralioides HOM05D004420 ORTHO05D005048 4.1e-16 89.7 305 33.8
BcaC06g36286 Brassica carinata HOM05D004420 ORTHO05D005048 7.0e-16 89.0 269 34.9
Thhalv10022789m.g Eutrema salsugineum HOM05D004420 ORTHO05D005048 1.6e-15 87.8 297 31.6
BolC3t18106H Brassica oleracea HOM05D004420 ORTHO05D005048 5.9e-15 85.9 275 33.8
CiPaw.13G121300 Carya illinoinensis HOM05D004420 ORTHO05D005048 7.7e-15 85.5 156 41.7
BcaC01g02911 Brassica carinata HOM05D004420 ORTHO05D005048 1.3e-14 84.7 273 33.3
C03p58480 Brassica napus HOM05D004420 ORTHO05D005048 1.3e-14 84.7 273 33.3
Lalb_Chr16g0380091 Lupinus albus HOM05D004420 ORTHO05D005048 1.3e-14 84.7 188 37.2
BcaNung03633 Brassica carinata HOM05D004420 ORTHO05D005048 1.7e-14 84.3 276 33.0
Lsat_1_v5_gn_3_67941 Lactuca sativa HOM05D004420 ORTHO05D005048 2.5e-13 80.5 239 35.6
Sp7g33290 Schrenkiella parvula HOM05D004420 ORTHO05D005048 3.2e-13 80.1 297 33.0
A01p03090 Brassica napus HOM05D004420 ORTHO05D005048 8.8e-11 72.0 276 33.7
BraA01t00293Z Brassica rapa HOM05D004420 ORTHO05D005048 1.1e-10 71.6 275 33.1
AT2G17540 Arabidopsis thaliana HOM05D004420 ORTHO05D005048 1.7e-09 67.8 290 29.0
C07p61200 Brassica napus HOM05D004420 ORTHO05D005048 4.8e-09 66.2 273 32.2
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 4.8e-09 66.2 298 28.5
MBI08_g12255_MAGBIO Magnolia biondii HOM05D004420 ORTHO05D005048 8.2e-09 65.5 321 26.8
BolC7t46546H Brassica oleracea HOM05D004420 ORTHO05D005048 1.1e-08 65.1 273 32.6
BolC1t00331H Brassica oleracea HOM05D004420 ORTHO05D005048 1.4e-08 64.7 266 30.1
BraA07t28141Z Brassica rapa HOM05D004420 ORTHO05D005048 1.4e-08 64.7 269 31.2
BolC7t40973H Brassica oleracea HOM05D004420 ORTHO05D005048 3.1e-08 63.5 269 30.9
CARHR107720 Cardamine hirsuta HOM05D004420 ORTHO05D005048 2.0e-07 60.8 322 29.5
BcaNung00585 Brassica carinata HOM05D004420 ORTHO05D005048 1.0e-06 58.5 266 29.7
C01p03440 Brassica napus HOM05D004420 ORTHO05D005048 1.0e-06 58.5 266 29.7


User provided reference genes

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