Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 0.0e+00 1215.7 667 100.0
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 3.4e-180 636.0 699 58.1
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 2.0e-161 573.5 700 51.9
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 1.7e-136 490.7 654 50.5
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 5.2e-133 479.2 679 47.0
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 2.0e-132 477.2 739 44.5
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 1.7e-131 474.2 689 48.3
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 2.7e-129 466.8 644 46.9
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 4.3e-127 459.5 652 46.3
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 9.6e-127 458.4 715 44.1
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 7.6e-124 448.7 674 45.1
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 3.8e-123 446.4 712 44.0
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.7e-120 437.6 701 42.4
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 1.7e-120 437.6 710 42.1
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.9e-120 436.4 702 42.2
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 6.6e-120 435.6 707 42.1
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 1.9e-119 434.1 641 46.6
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 9.6e-119 431.8 695 41.4
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 1.6e-118 431.0 724 42.0
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 4.0e-117 426.4 709 42.0
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 1.5e-116 424.5 708 42.4
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 2.6e-116 423.7 709 42.0
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 5.5e-114 416.0 673 43.2
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 2.1e-113 414.1 680 40.3
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 1.0e-112 411.8 689 41.7
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 6.7e-112 409.1 694 40.5
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.9e-111 407.5 675 42.2
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 3.3e-111 406.8 710 40.0
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 3.3e-111 406.8 697 41.5
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 5.6e-111 406.0 668 41.0
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 1.6e-110 404.4 715 41.0
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 4.8e-110 402.9 705 41.6
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 6.2e-110 402.5 708 41.4
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 3.1e-109 400.2 729 39.5
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 4.0e-109 399.8 708 41.0
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 9.0e-109 398.7 691 42.5
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 3.4e-108 396.7 709 41.2
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 1.0e-107 395.2 704 40.8
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 1.7e-107 394.4 702 41.0
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 1.9e-106 391.0 647 40.6
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 2.5e-106 390.6 716 39.5
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 2.5e-106 390.6 692 40.5
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 7.1e-106 389.0 709 38.8
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 1.2e-105 388.3 711 41.1
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 1.6e-105 387.9 706 44.1
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.6e-105 387.9 704 38.9
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 2.3e-104 384.0 712 42.3
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 3.0e-104 383.6 707 40.5
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 8.7e-104 382.1 722 41.0
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 1.1e-103 381.7 721 38.1
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.5e-103 381.3 715 38.2
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 2.5e-103 380.6 723 39.1
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 5.7e-103 379.4 703 38.5
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 2.8e-102 377.1 754 37.9
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 2.8e-102 377.1 705 39.7
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 3.7e-102 376.7 679 39.8
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 8.2e-102 375.6 703 39.8
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 1.4e-101 374.8 707 38.9
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 1.4e-101 374.8 665 41.5
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 1.2e-100 371.7 706 39.5
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.6e-100 370.5 768 40.2
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 2.6e-100 370.5 701 38.1
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.4e-100 370.2 710 40.1
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 5.9e-100 369.4 708 39.8
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 7.6e-100 369.0 704 38.5
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 7.6e-100 369.0 717 39.6
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 1.0e-99 368.6 707 39.6
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 1.3e-99 368.2 690 40.9
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 2.9e-99 367.1 717 37.5
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 5.0e-99 366.3 718 37.7
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 4.2e-98 363.2 714 40.5
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 9.3e-98 362.1 769 38.2
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 1.6e-97 361.3 720 39.6
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 4.6e-97 359.8 704 37.6
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 1.0e-96 358.6 689 38.3
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 2.3e-96 357.5 720 37.9
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 5.1e-96 356.3 687 39.4
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 1.5e-95 354.8 696 37.6
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 1.9e-95 354.4 714 39.4
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 2.5e-95 354.0 697 39.7
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 3.7e-94 350.1 722 39.5
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.4e-93 348.2 810 36.3
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 4.1e-93 346.7 714 37.1
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 4.1e-93 346.7 635 39.7
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 1.0e-91 342.0 633 40.3
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 1.7e-91 341.3 618 42.1
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 1.7e-91 341.3 706 37.8
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.9e-91 340.5 722 38.6
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 1.4e-90 338.2 679 40.2
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.2e-90 337.0 711 38.5
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 5.5e-90 336.3 694 36.6
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 7.2e-90 335.9 721 37.7
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 7.2e-90 335.9 649 41.1
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 1.0e-88 332.0 522 42.3
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.0e-88 332.0 725 37.0
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 3.9e-88 330.1 706 36.8
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 8.8e-88 328.9 511 46.2
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 3.3e-87 327.0 705 36.9
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 7.4e-87 325.9 621 37.8
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.7e-86 323.6 718 37.0
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 8.2e-86 322.4 634 38.6
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 1.4e-85 321.6 311 54.0
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 2.4e-85 320.9 840 36.9
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 2.4e-85 320.9 714 36.0
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 2.6e-84 317.4 631 40.7
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 4.5e-84 316.6 385 47.5
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 2.9e-83 313.9 666 41.1
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 3.2e-82 310.5 666 38.4
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 6.1e-81 306.2 663 40.0
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 7.9e-81 305.8 657 38.2
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 7.9e-81 305.8 610 40.0
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 1.4e-80 305.1 661 36.9
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 6.7e-80 302.8 664 37.7
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 1.1e-79 302.0 711 37.6
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 1.5e-79 301.6 739 37.3
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 7.4e-79 299.3 660 36.1
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 9.7e-79 298.9 666 37.8
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 9.7e-79 298.9 669 36.9
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 1.7e-78 298.1 599 37.6
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 3.7e-78 297.0 572 37.1
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 3.7e-78 297.0 777 32.9
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 4.8e-78 296.6 658 38.6
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 4.8e-78 296.6 654 36.7
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 6.3e-78 296.2 669 38.0
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 1.8e-77 294.7 776 35.7
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 5.3e-77 293.1 663 39.7
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 5.3e-77 293.1 462 42.0
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.2e-76 292.0 550 40.4
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 3.5e-76 290.4 669 37.5
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 4.5e-76 290.0 662 38.2
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.3e-75 288.5 267 55.8
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 2.9e-75 287.3 643 36.5
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 3.8e-75 287.0 662 37.5
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 3.8e-75 287.0 560 38.4
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.5e-74 285.0 369 45.5
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.8e-72 278.1 200 71.0
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 1.2e-71 275.4 664 35.2
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 3.3e-71 273.9 686 33.7
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 3.3e-71 273.9 302 50.3
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 3.3e-71 273.9 703 32.3
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 1.3e-67 261.9 729 34.0
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 8.0e-65 252.7 565 34.0
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 1.8e-64 251.5 262 51.9
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 1.8e-64 251.5 244 51.6
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 1.2e-63 248.8 297 53.2
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 4.4e-63 246.9 230 56.5
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 3.8e-59 233.8 267 49.1
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 4.1e-53 213.8 690 31.4
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 5.9e-52 209.9 637 29.7
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 5.0e-51 206.8 249 45.4
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.1e-50 205.7 238 48.3
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 8.9e-48 196.1 139 69.8
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.3e-42 177.6 718 30.2
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 8.0e-41 172.9 138 66.7
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 6.0e-36 156.8 208 43.8
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 2.0e-31 141.7 149 49.7
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 7.5e-31 139.8 138 50.7
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 3.7e-30 137.5 193 46.6
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.9e-26 125.2 202 40.1
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 1.6e-25 122.1 482 30.7
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 2.2e-22 111.7 295 32.9
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 2.9e-22 111.3 80 71.2
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 3.8e-22 110.9 414 31.2
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 1.2e-15 89.4 297 32.0
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 2.4e-13 81.6 67 56.7
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 9.3e-13 79.7 283 32.9
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 3.5e-12 77.8 65 63.1
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 3.5e-12 77.8 332 31.0
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 3.9e-11 74.3 66 60.6
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 3.3e-10 71.2 81 50.6
HPP92_028446 Vanilla planifolia HOM05D003626 ORTHO05D004255 4.3e-10 70.9 120 39.2
TAR636G0984 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.6e-09 68.9 68 54.4
AagrBONN_evm.TU.Sc2ySwM_362.2615 Anthoceros agrestis HOM05D003626 ORTHO05D004255 4.8e-09 67.4 157 34.4
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.5e-07 62.4 54 61.1
Oeu035062.1 Olea europaea HOM05D003626 ORTHO05D004255 1.3e-06 59.3 152 37.5
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 8.4e-06 56.6 289 28.4


User provided reference genes

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