Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold60G21043 Striga asiatica HOM05D004189 ORTHO05D004092 3.0e-131 471.9 241 100.0
Oeu024223.1 Olea europaea HOM05D004189 ORTHO05D004092 5.7e-29 132.1 288 35.4
Migut.F00339 Erythranthe guttata HOM05D004189 ORTHO05D004092 5.9e-26 122.1 303 36.6
Cc03_g07610 Coffea canephora HOM05D004189 ORTHO05D004092 9.7e-21 104.8 274 32.1
Manes.06G147200 Manihot esculenta HOM05D004189 ORTHO05D004092 2.2e-20 103.6 228 33.8
Migut.F01119 Erythranthe guttata HOM05D004189 ORTHO05D004092 6.3e-20 102.1 225 37.8
unitig_46.g18790 Utricularia gibba HOM05D004189 ORTHO05D004092 2.0e-18 97.1 192 38.0
SalBow4G1418 Salvia bowleyana HOM05D026728 ORTHO05D004092 1.0e-17 94.7 266 32.7
Hund11746 Selenicereus undatus HOM05D004189 ORTHO05D004092 6.5e-17 92.0 261 32.6
Gohir.D12G259100 Gossypium hirsutum HOM05D004189 ORTHO05D004092 8.5e-17 91.7 262 32.4
Sabra15G0153700 Salix brachista HOM05D004189 ORTHO05D004092 1.1e-16 91.3 291 31.3
Solyc03g025810.4 Solanum lycopersicum HOM05D004189 ORTHO05D004092 1.1e-16 91.3 327 30.3
PGSC0003DMG400014293 Solanum tuberosum HOM05D004189 ORTHO05D004092 1.1e-16 91.3 329 29.2
Gohir.A12G257800 Gossypium hirsutum HOM05D004189 ORTHO05D004092 2.5e-16 90.1 266 32.0
Gorai.008G277500 Gossypium raimondii HOM05D004189 ORTHO05D004092 2.5e-16 90.1 262 32.8
SalBow4G1950 Salvia bowleyana HOM05D026728 ORTHO05D004092 4.2e-16 89.4 174 38.5
Sopen03g004620 Solanum pennellii HOM05D004189 ORTHO05D004092 9.4e-16 88.2 337 29.1
Nitab4.5_0000716g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 1.0e-14 84.7 193 37.3
TAR374G0772 Trochodendron aralioides HOM05D004189 ORTHO05D004092 1.0e-14 84.7 248 29.8
CAN.G490.32 Capsicum annuum HOM05D004189 ORTHO05D004092 2.3e-14 83.6 281 32.0
Nitab4.5_0009681g0010 Nicotiana tabacum HOM05D004189 ORTHO05D004092 3.0e-14 83.2 196 36.2
Potri.012G141300 Populus trichocarpa HOM05D004189 ORTHO05D004092 6.7e-14 82.0 286 30.1
Cpa.g.sc107.53 Carica papaya HOM05D004189 ORTHO05D004092 9.7e-13 78.2 286 28.0
COL.COLO4_14310 Corchorus olitorius HOM05D004189 ORTHO05D004092 3.7e-12 76.3 185 32.4
TWI23G0464 Tripterygium wilfordii HOM05D004189 ORTHO05D004092 8.2e-12 75.1 325 28.6
Actinidia34113 Actinidia chinensis HOM05D004189 ORTHO05D004092 3.1e-11 73.2 238 31.1
CDE08G1026 Ceratophyllum demersum HOM05D004189 ORTHO05D004092 3.1e-11 73.2 197 32.5
Eucgr.A02790 Eucalyptus grandis HOM05D004189 ORTHO05D004092 3.1e-11 73.2 137 38.7
Nn6g33499 Nelumbo nucifera HOM05D004189 ORTHO05D004092 3.1e-11 73.2 280 28.9
Prupe.2G294400 Prunus persica HOM05D004189 ORTHO05D004092 5.3e-11 72.4 247 30.4
vmacro06681 Vaccinium macrocarpon HOM05D004189 ORTHO05D004092 5.3e-11 72.4 357 25.8
arahy.Tifrunner.gnm1.ann1.EQ3RBX Arachis hypogaea HOM05D004189 ORTHO05D004092 9.1e-11 71.6 109 38.5
RcHm_v2.0_Chr1g0377331 Rosa chinensis HOM05D013146 ORTHO05D004092 9.1e-11 71.6 147 31.3
Peaxi162Scf00444g00847 Petunia axillaris HOM05D004189 ORTHO05D004092 1.2e-10 71.2 358 27.7
Nitab4.5_0002721g0060 Nicotiana tabacum HOM05D004189 ORTHO05D004092 2.7e-10 70.1 169 32.0
arahy.Tifrunner.gnm1.ann1.E2ZRS1 Arachis hypogaea HOM05D004189 ORTHO05D004092 3.5e-10 69.7 109 38.5
Nitab4.5_0003242g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 7.7e-10 68.6 169 33.1
Ciclev10004574m.g Citrus clementina HOM05D004189 ORTHO05D004092 1.3e-09 67.8 287 28.9
RcHm_v2.0_Chr1g0377291 Rosa chinensis HOM05D013146 ORTHO05D004092 1.7e-09 67.4 299 24.4
Thecc.03G176700 Theobroma cacao HOM05D004189 ORTHO05D004092 2.9e-09 66.6 248 28.6
CiPaw.03G106300 Carya illinoinensis HOM05D004189 ORTHO05D004092 3.8e-09 66.2 118 35.6
Dinv28441 Davidia involucrata HOM05D004189 ORTHO05D004092 3.8e-09 66.2 146 36.3
Glyma.09G139600 Glycine max HOM05D004189 ORTHO05D004092 3.8e-09 66.2 100 38.0
A02p11900 Brassica napus HOM05D004189 ORTHO05D004092 5.0e-09 65.9 297 31.0
Glyma.16G189900 Glycine max HOM05D004189 ORTHO05D004092 5.0e-09 65.9 141 31.9
SGA_v2.0_scaffold10G05341 Striga asiatica HOM05D026728 ORTHO05D004092 5.0e-09 65.9 178 31.5
Lalb_Chr19g0130831 Lupinus albus HOM05D004189 ORTHO05D004092 6.5e-09 65.5 91 41.8
MD01G1201000 Malus domestica HOM05D004189 ORTHO05D004092 8.5e-09 65.1 107 31.8
ECA238G1803 Erigeron canadensis HOM05D004189 ORTHO05D004092 1.5e-08 64.3 220 26.4
Sc19g0001510 Simmondsia chinensis HOM05D004189 ORTHO05D004092 1.5e-08 64.3 294 28.9
Thhalv10024860m.g Eutrema salsugineum HOM05D004189 ORTHO05D004092 1.9e-08 63.9 223 29.1
EL10Ac3g05642 Beta vulgaris HOM05D004189 ORTHO05D004092 2.5e-08 63.5 293 25.9
PGR042G0303 Punica granatum HOM05D004189 ORTHO05D004092 2.5e-08 63.5 91 40.7
FAN03G0039 Fragaria x ananassa HOM05D013146 ORTHO05D004092 5.5e-08 62.4 100 33.0
Lj8A24G36 Lonicera japonica HOM05D004189 ORTHO05D004092 5.5e-08 62.4 291 28.2
Lj2g0010006 Lotus japonicus HOM05D004189 ORTHO05D004092 7.2e-08 62.0 127 34.6
FAN01G1221 Fragaria x ananassa HOM05D013146 ORTHO05D004092 9.4e-08 61.6 100 33.0
GSVIVG01028976001 Vitis vinifera HOM05D004189 ORTHO05D004092 9.4e-08 61.6 164 34.8
FAN03G0716 Fragaria x ananassa HOM05D013146 ORTHO05D004092 1.2e-07 61.2 90 35.6
Medtr6g045273 Medicago truncatula HOM05D004189 ORTHO05D004092 1.2e-07 61.2 102 34.3
Psat0s2227g0040 Pisum sativum HOM05D004189 ORTHO05D004092 1.2e-07 61.2 81 43.2
CANSAT21G0752 Cannabis sativa HOM05D004189 ORTHO05D004092 1.6e-07 60.8 164 31.1
Phvul.004G117100 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 1.6e-07 60.8 89 37.1
THA.LOC104800253 Tarenaya hassleriana HOM05D004189 ORTHO05D004092 2.1e-07 60.5 306 26.8
FAN10G2376 Fragaria x ananassa HOM05D013146 ORTHO05D004092 2.7e-07 60.1 91 34.1
FAN10G2986 Fragaria x ananassa HOM05D013146 ORTHO05D004092 2.7e-07 60.1 91 34.1
QL09p014192 Quercus lobata HOM05D004189 ORTHO05D004092 6.1e-07 58.9 160 32.5
AUR62015982 Chenopodium quinoa HOM05D004189 ORTHO05D004092 8.0e-07 58.5 195 28.2
C02p19900 Brassica napus HOM05D004189 ORTHO05D004092 1.0e-06 58.2 317 30.0
BolC2t08123H Brassica oleracea HOM05D004189 ORTHO05D004092 1.0e-06 58.2 317 30.0
CANSAT21G0725 Cannabis sativa HOM05D004189 ORTHO05D004092 1.0e-06 58.2 164 30.5
Carub.0007s1540 Capsella rubella HOM05D004189 ORTHO05D004092 1.0e-06 58.2 271 27.3
Cfa008320 Carpinus fangiana HOM05D004189 ORTHO05D004092 1.0e-06 58.2 166 31.9
THA.LOC104811978 Tarenaya hassleriana HOM05D004189 ORTHO05D004092 1.0e-06 58.2 245 28.2
Lsat_1_v5_gn_8_8621 Lactuca sativa HOM05D004189 ORTHO05D004092 2.3e-06 57.0 256 28.5
ATR0680G076 Amborella trichopoda HOM05D004189 ORTHO05D004092 3.0e-06 56.6 226 27.9
BcaC03g14545 Brassica carinata HOM05D004189 ORTHO05D004092 3.0e-06 56.6 271 30.3
Peaxi162Scf00234g00811 Petunia axillaris HOM05D004189 ORTHO05D004092 3.0e-06 56.6 160 32.5
BcaB05g21946 Brassica carinata HOM05D004189 ORTHO05D004092 6.8e-06 55.5 242 31.4


User provided reference genes

Program Settings