Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold60G20995 Striga asiatica HOM05D000283 ORTHO05D006673 0.0e+00 2018.8 1068 100.0
Migut.F00680 Erythranthe guttata HOM05D000283 ORTHO05D006673 5.1e-154 549.7 1323 37.9
SalBow6G2235 Salvia bowleyana HOM05D000283 ORTHO05D006673 1.9e-145 521.2 1324 36.9
MSTRG.8954 Avicennia marina HOM05D000283 ORTHO05D006673 4.2e-140 503.4 1365 35.8
MSTRG.27328 Avicennia marina HOM05D000283 ORTHO05D006673 6.0e-139 499.6 1359 36.1
SGA_v2.0_scaffold44G16697 Striga asiatica HOM05D000283 ORTHO05D006673 9.7e-89 332.8 802 38.2
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 1.4e-79 302.4 1373 28.6
SGA_v2.0_scaffold44G16695 Striga asiatica HOM05D000283 ORTHO05D006673 7.2e-76 290.0 1119 31.9
CSS0006513 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 1.7e-72 278.9 1387 29.0
CSS0040218 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 2.4e-71 275.0 1387 29.1
Hma1.2p1_0348F.1_g131680 Hydrangea macrophylla HOM05D000283 ORTHO05D006673 1.8e-58 232.3 1355 28.3
Rhsim09G0155800 Rhododendron simsii HOM05D000283 ORTHO05D006673 3.9e-53 214.5 1343 26.9
QL08p057512 Quercus lobata HOM05D000283 ORTHO05D006673 3.1e-50 204.9 1361 26.2
Oeu025162.3 Olea europaea HOM05D000283 ORTHO05D006673 2.6e-49 201.8 1217 27.0
Peaxi162Scf00135g00027 Petunia axillaris HOM05D000283 ORTHO05D006673 8.3e-48 196.8 1337 25.6
Ciclev10033332m.g Citrus clementina HOM05D000283 ORTHO05D006673 9.2e-47 193.4 1334 26.7
Duzib114G0075 Durio zibethinus HOM05D000283 ORTHO05D006673 3.5e-46 191.4 1149 27.0
Lj8A92T85 Lonicera japonica HOM05D000283 ORTHO05D006673 6.0e-46 190.7 1233 27.7
Cfa001559 Carpinus fangiana HOM05D000283 ORTHO05D005391 1.7e-45 189.1 1296 25.8
Nitab4.5_0006737g0060 Nicotiana tabacum HOM05D000283 ORTHO05D006673 1.6e-43 182.6 1312 26.8
Prupe.2G224500 Prunus persica HOM05D000283 ORTHO05D006673 2.3e-42 178.7 1364 25.7
Nitab4.5_0007221g0010 Nicotiana tabacum HOM05D000283 ORTHO05D006673 3.1e-42 178.3 1294 26.5
CiPaw.01G279600 Carya illinoinensis HOM05D000283 ORTHO05D006673 1.3e-40 172.9 1378 26.0
Sopen04g005360 Solanum pennellii HOM05D000283 ORTHO05D006673 1.2e-38 166.4 1283 26.2
Thecc.10G063100 Theobroma cacao HOM05D000283 ORTHO05D006673 1.6e-38 166.0 1231 26.2
PGSC0003DMG400011483 Solanum tuberosum HOM05D000283 ORTHO05D006673 4.6e-38 164.5 1300 26.2
Cc02_g08660 Coffea canephora HOM05D000283 ORTHO05D006673 3.0e-37 161.8 1290 25.8
RcHm_v2.0_Chr1g0365001 Rosa chinensis HOM05D000283 ORTHO05D006673 8.6e-37 160.2 1318 25.0
MD07G1184600 Malus domestica HOM05D000283 ORTHO05D006673 7.3e-36 157.1 1317 26.3
Atru.chr12.593 Acer truncatum HOM05D000283 ORTHO05D006673 1.2e-35 156.4 1285 26.5
Gorai.012G066900 Gossypium raimondii HOM05D000283 ORTHO05D006673 3.6e-35 154.8 1342 24.9
TWI38G0559 Tripterygium wilfordii HOM05D000283 ORTHO05D006673 1.4e-34 152.9 1374 24.8
Manes.10G039300 Manihot esculenta HOM05D000283 ORTHO05D006673 5.2e-34 151.0 1275 26.0
CiPaw.02G178500 Carya illinoinensis HOM05D000283 ORTHO05D006673 3.4e-33 148.3 1279 24.6
FAN06G2682 Fragaria x ananassa HOM05D000283 ORTHO05D006673 4.4e-33 147.9 1318 25.5
Manes.10G039200 Manihot esculenta HOM05D000283 ORTHO05D006673 1.3e-32 146.4 1282 25.9
TAR636G0162 Trochodendron aralioides HOM05D000283 ORTHO05D006673 2.2e-32 145.6 1254 25.4
Gohir.A05G352800 Gossypium hirsutum HOM05D000283 ORTHO05D006673 3.8e-32 144.8 1287 23.9
Solyc04g010185.1 Solanum lycopersicum HOM05D000283 ORTHO05D006673 1.1e-31 143.3 810 29.1
COL.COLO4_29238 Corchorus olitorius HOM05D000283 ORTHO05D006673 1.9e-31 142.5 1209 25.4
TPR.G10427 Trifolium pratense HOM05D000283 ORTHO05D006673 1.9e-31 142.5 1379 24.7
FvH4_7g20760 Fragaria vesca HOM05D000283 ORTHO05D006673 3.2e-31 141.7 1308 25.1
Potri.008G047600 Populus trichocarpa HOM05D000283 ORTHO05D006673 7.1e-31 140.6 1370 26.5
arahy.Tifrunner.gnm1.ann1.SA4FWZ Arachis hypogaea HOM05D000283 ORTHO05D006673 1.2e-30 139.8 1358 25.3
arahy.Tifrunner.gnm1.ann1.U4C8JV Arachis hypogaea HOM05D000283 ORTHO05D006673 6.0e-30 137.5 1361 25.1
Glyma.20G242400 Glycine max HOM05D000283 ORTHO05D006673 7.8e-30 137.1 1389 24.5
MD01G1117200 Malus domestica HOM05D000283 ORTHO05D006673 2.3e-29 135.6 1339 24.6
FAN06G0550 Fragaria x ananassa HOM05D000283 ORTHO05D006673 3.9e-29 134.8 1309 24.8
FAN03G1488 Fragaria x ananassa HOM05D000283 ORTHO05D006673 3.3e-28 131.7 1302 24.7
Glyma.10G292400 Glycine max HOM05D000283 ORTHO05D006673 4.3e-28 131.3 1394 24.0
Ca_11324_v3 Cicer arietinum L. HOM05D000283 ORTHO05D006673 7.3e-28 130.6 917 26.8
FAN10G3387 Fragaria x ananassa HOM05D000283 ORTHO05D005391 9.6e-28 130.2 1305 25.0
Psat6g238520 Pisum sativum HOM05D000283 ORTHO05D006673 4.7e-27 127.9 814 27.9
VMungo0720G0439 Vigna mungo HOM05D000283 ORTHO05D006673 2.0e-25 122.5 747 27.3
Lj5g0015824 Lotus japonicus HOM05D000283 ORTHO05D006673 2.6e-25 122.1 817 27.1
Medtr1g115950 Medicago truncatula HOM05D000283 ORTHO05D006673 2.6e-25 122.1 1375 24.1
Gohir.D04G060201 Gossypium hirsutum HOM05D000283 ORTHO05D006673 3.4e-25 121.7 1296 23.8
TAR633G0056 Trochodendron aralioides HOM05D000283 ORTHO05D006673 5.8e-25 120.9 1418 23.3
Phvul.007G007900 Phaseolus vulgaris HOM05D000283 ORTHO05D006673 1.4e-23 116.3 1363 24.4
Sabra08G0033700 Salix brachista HOM05D000283 ORTHO05D006673 1.0e-21 110.2 1382 25.9
Duzib106G1116 Durio zibethinus HOM05D000283 ORTHO05D006673 3.0e-21 108.6 1291 24.1
Potri.010G213800 Populus trichocarpa HOM05D000283 ORTHO05D006673 8.7e-21 107.1 1346 26.8
Lalb_Chr02g0143831 Lupinus albus HOM05D000283 ORTHO05D006673 1.3e-19 103.2 1007 26.0
Aqoxy2G01934 Aquilegia oxysepala HOM05D000283 ORTHO05D006673 8.1e-19 100.5 893 24.7
Lalb_Chr02g0143851 Lupinus albus HOM05D000283 ORTHO05D006673 3.1e-18 98.6 782 26.2
Cpa.g.sc1.301 Carica papaya HOM05D000283 ORTHO05D006673 9.9e-17 93.6 853 23.1
Sabra10G0165500 Salix brachista HOM05D000283 ORTHO05D006673 2.2e-16 92.4 703 27.3
Cpa.g.sc1.302 Carica papaya HOM05D000283 ORTHO05D006673 3.2e-15 88.6 202 39.6
Nn2g11490 Nelumbo nucifera HOM05D000283 ORTHO05D006673 3.2e-15 88.6 513 29.0
Oeu025164.1 Olea europaea HOM05D000283 ORTHO05D010811 4.2e-15 88.2 347 29.1
CANSAT56G3782 Cannabis sativa HOM05D000283 ORTHO05D006673 2.7e-14 85.5 1358 23.0
Haze_16971 Corylus avellana HOM05D000283 ORTHO05D006673 2.3e-13 82.4 763 22.5
GSVIVG01032629001 Vitis vinifera HOM05D000283 ORTHO05D006673 2.3e-13 82.4 508 28.9
Actinidia29198 Actinidia chinensis HOM05D000283 ORTHO05D006673 1.5e-12 79.7 297 30.6
PGSC0003DMG400011491 Solanum tuberosum HOM05D000283 ORTHO05D006673 2.5e-12 79.0 750 25.1
Oeu025165.1 Olea europaea HOM05D008194 ORTHO05D010811 2.4e-10 72.4 300 29.0
DCAR_020267 Daucus carota HOM05D000457 ORTHO05D000560 1.3e-08 66.6 1065 23.2
DCAR_010662 Daucus carota HOM05D000283 ORTHO05D006673 2.2e-08 65.9 533 25.9
PSO478G2008 Papaver somniferum HOM05D000283 ORTHO05D006673 3.2e-07 62.0 760 23.2
PSO782G0271 Papaver somniferum HOM05D000283 ORTHO05D006673 7.1e-07 60.8 757 23.5
ClCG09G020310 Citrullus lanatus HOM05D000283 ORTHO05D006673 6.0e-06 57.8 759 26.1


User provided reference genes

Program Settings