Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold60G20979 Striga asiatica HOM05D000157 ORTHO05D000311 2.7e-49 198.4 101 100.0
MSTRG.27319 Avicennia marina HOM05D000157 ORTHO05D000311 8.8e-24 113.6 86 70.9
Migut.F00662 Erythranthe guttata HOM05D000157 ORTHO05D000311 1.5e-23 112.8 87 66.7
Oeu034917.1 Olea europaea HOM05D000086 ORTHO05D000311 1.1e-21 106.7 88 60.2
Nitab4.5_0000058g0320 Nicotiana tabacum HOM05D000157 ORTHO05D000311 2.9e-19 98.6 92 57.6
Dinv10602 Davidia involucrata HOM05D000086 ORTHO05D000311 2.5e-18 95.5 87 57.5
Dinv21751 Davidia involucrata HOM05D000157 ORTHO05D000311 5.5e-18 94.4 95 55.8
Peaxi162Scf00284g00715 Petunia axillaris HOM05D000157 ORTHO05D000311 5.5e-18 94.4 87 54.0
Nitab4.5_0000683g0070 Nicotiana tabacum HOM05D000157 ORTHO05D000311 1.2e-17 93.2 93 59.1
VMungo1383G2255 Vigna mungo HOM05D000157 ORTHO05D000311 4.7e-17 91.3 87 51.7
Cc02_g06240 Coffea canephora HOM05D000086 ORTHO05D000311 1.0e-16 90.1 83 59.0
Glyma.11G231400 Glycine max HOM05D000086 ORTHO05D000311 8.8e-16 87.0 87 54.0
Atru.chr12.91 Acer truncatum HOM05D000086 ORTHO05D000311 1.1e-15 86.7 95 49.5
Oeu004682.1 Olea europaea HOM05D000440 ORTHO05D000311 1.1e-15 86.7 89 56.2
QL08p063447 Quercus lobata HOM05D000157 ORTHO05D000311 1.1e-15 86.7 95 51.6
Glyma.18G025700 Glycine max HOM05D000086 ORTHO05D000311 2.0e-15 85.9 88 51.1
Phvul.001G244600 Phaseolus vulgaris HOM05D000157 ORTHO05D000311 2.6e-15 85.5 83 50.6
Haze_17247 Corylus avellana HOM05D000157 ORTHO05D000311 9.7e-15 83.6 89 52.8
Thecc.10G013500 Theobroma cacao HOM05D000157 ORTHO05D000311 1.3e-14 83.2 89 46.1
Lsat_1_v5_gn_2_124020 Lactuca sativa HOM05D000157 ORTHO05D000311 2.2e-14 82.4 89 55.1
Peaxi162Scf00484g00008 Petunia axillaris HOM05D000157 ORTHO05D000311 2.2e-14 82.4 88 52.3
Duzib114G1050 Durio zibethinus HOM05D000157 ORTHO05D000311 3.7e-14 81.6 88 47.7
HanXRQChr14g0459461 Helianthus annuus HOM05D000086 ORTHO05D000311 4.8e-14 81.3 86 57.0
COL.COLO4_00279 Corchorus olitorius HOM05D000086 ORTHO05D000311 6.3e-14 80.9 89 47.2
HanXRQChr07g0203161 Helianthus annuus HOM05D000086 ORTHO05D000311 6.3e-14 80.9 84 50.0
CsaV3_5G010310 Cucumis sativus L. HOM05D000157 ORTHO05D000311 1.1e-13 80.1 78 56.4
PGR044G0801 Punica granatum HOM05D000086 ORTHO05D000311 1.1e-13 80.1 88 50.0
Eucgr.L00233 Eucalyptus grandis HOM05D000157 ORTHO05D000311 1.4e-13 79.7 87 52.9
TAR623G0491 Trochodendron aralioides HOM05D000086 ORTHO05D000311 1.8e-13 79.3 90 48.9
Gohir.D06G168000 Gossypium hirsutum HOM05D000157 ORTHO05D000311 2.4e-13 79.0 99 42.4
Nn2g13195 Nelumbo nucifera HOM05D000086 ORTHO05D000311 2.4e-13 79.0 83 51.8
Gorai.010G195900 Gossypium raimondii HOM05D000157 ORTHO05D000311 3.1e-13 78.6 99 42.4
Ciclev10032946m.g Citrus clementina HOM05D000157 ORTHO05D000311 4.1e-13 78.2 88 48.9
Gohir.A06G162500 Gossypium hirsutum HOM05D000157 ORTHO05D000311 4.1e-13 78.2 99 42.4
Manes.10G010400 Manihot esculenta HOM05D000086 ORTHO05D000311 4.1e-13 78.2 93 47.3
ClCG07G004370 Citrullus lanatus HOM05D000086 ORTHO05D000311 7.0e-13 77.4 78 53.8
MELO3C018366.2 Cucumis melo HOM05D000157 ORTHO05D000311 7.0e-13 77.4 84 53.6
Sed0024787 Sechium edule HOM05D000157 ORTHO05D000311 7.0e-13 77.4 78 52.6
Hund13881 Selenicereus undatus HOM05D000086 ORTHO05D000311 9.1e-13 77.0 101 47.5
TPR.G11207 Trifolium pratense HOM05D000086 ORTHO05D000311 1.2e-12 76.6 87 44.8
Lalb_Chr23g0276961 Lupinus albus HOM05D000157 ORTHO05D000311 2.0e-12 75.9 83 50.6
PGSC0003DMG400015661 Solanum tuberosum HOM05D000086 ORTHO05D000311 2.0e-12 75.9 91 45.1
Potri.008G071000 Populus trichocarpa HOM05D000086 ORTHO05D000311 2.6e-12 75.5 91 48.4
Sabra08G0052300 Salix brachista HOM05D000086 ORTHO05D000311 3.5e-12 75.1 93 45.2
CANSAT56G0444 Cannabis sativa HOM05D000157 ORTHO05D000311 4.5e-12 74.7 84 46.4
CANSAT56G3355 Cannabis sativa HOM05D000157 ORTHO05D000311 4.5e-12 74.7 84 46.4
Phvul.008G222500 Phaseolus vulgaris HOM05D000086 ORTHO05D000311 4.5e-12 74.7 83 49.4
Medtr3g071300 Medicago truncatula HOM05D000157 ORTHO05D000311 7.7e-12 73.9 88 44.3
Ca_15137_v3 Cicer arietinum L. HOM05D000086 ORTHO05D000311 1.3e-11 73.2 84 45.2
Duzib128G2006 Durio zibethinus HOM05D000086 ORTHO05D000311 1.3e-11 73.2 92 42.4
MBI15_g13978_MAGBIO Magnolia biondii HOM05D000086 ORTHO05D000311 1.3e-11 73.2 83 45.8
Sopen06g017190 Solanum pennellii HOM05D000086 ORTHO05D000311 1.3e-11 73.2 91 45.1
ATR0681G277 Amborella trichopoda HOM05D000086 ORTHO05D000311 1.7e-11 72.8 99 42.4
CiPaw.02G194000 Carya illinoinensis HOM05D000157 ORTHO05D000311 2.2e-11 72.4 93 44.1
Eucgr.J00188 Eucalyptus grandis HOM05D000086 ORTHO05D000311 3.8e-11 71.6 89 47.2
Cfa001299 Carpinus fangiana HOM05D000157 ORTHO05D000311 5.0e-11 71.2 92 45.7
PSO017G0017 Papaver somniferum HOM05D000157 ORTHO05D000311 6.5e-11 70.9 96 40.6
Sc10g0002490 Simmondsia chinensis HOM05D000157 ORTHO05D000311 1.5e-10 69.7 98 41.8
TWI09G1268 Tripterygium wilfordii HOM05D000086 ORTHO05D000311 1.9e-10 69.3 89 47.2
RcHm_v2.0_Chr1g0370601 Rosa chinensis HOM05D000157 ORTHO05D000311 3.2e-10 68.6 88 47.7
Lj6g0009441 Lotus japonicus HOM05D000086 ORTHO05D000311 4.2e-10 68.2 88 42.0
MD01G1155300 Malus domestica HOM05D000157 ORTHO05D000311 5.5e-10 67.8 89 44.9
Solyc06g051250.1 Solanum lycopersicum HOM05D000086 ORTHO05D000311 7.2e-10 67.4 91 40.7
Psat2g032400 Pisum sativum HOM05D000086 ORTHO05D000311 9.4e-10 67.0 88 43.2
Gohir.A10G239600 Gossypium hirsutum HOM05D000157 ORTHO05D000311 1.6e-09 66.2 88 42.0
PSO170G0598 Papaver somniferum HOM05D000086 ORTHO05D000311 2.7e-09 65.5 96 39.6
TAR636G1112 Trochodendron aralioides HOM05D000086 ORTHO05D000311 3.6e-09 65.1 87 46.0
TAR636G3133 Trochodendron aralioides HOM05D000086 ORTHO05D000311 3.6e-09 65.1 87 46.0
AUR62022913 Chenopodium quinoa HOM05D000086 ORTHO05D000311 4.7e-09 64.7 89 44.9
FAN01G2645 Fragaria x ananassa HOM05D000157 ORTHO05D000311 6.1e-09 64.3 88 47.7
Glyma.02G264800 Glycine max HOM05D000440 ORTHO05D000311 8.0e-09 63.9 86 47.7
Lalb_Chr08g0231611 Lupinus albus HOM05D000086 ORTHO05D000311 1.0e-08 63.5 82 43.9
arahy.Tifrunner.gnm1.ann1.VN1U1F Arachis hypogaea HOM05D000157 ORTHO05D000311 1.4e-08 63.2 83 43.4
CARHR085690 Cardamine hirsuta HOM05D000086 ORTHO05D000311 1.4e-08 63.2 102 44.1
LjContig00357g0025849 Lotus japonicus HOM05D000086 ORTHO05D000311 1.4e-08 63.2 84 42.9
AL3G22650 Arabidopsis lyrata HOM05D000086 ORTHO05D000311 1.8e-08 62.8 101 42.6
Rhsim09G0178600 Rhododendron simsii HOM05D000157 ORTHO05D000311 1.8e-08 62.8 89 43.8
BolC5t34360H Brassica oleracea HOM05D000086 ORTHO05D000311 2.3e-08 62.4 97 47.4
Carub.0003s1042 Capsella rubella HOM05D000086 ORTHO05D000311 2.3e-08 62.4 95 46.3
Prupe.2G252900 Prunus persica HOM05D000157 ORTHO05D000311 2.3e-08 62.4 92 44.6
THA.LOC104823183 Tarenaya hassleriana HOM05D000086 ORTHO05D000311 2.3e-08 62.4 91 44.0
FAN10G3483 Fragaria x ananassa HOM05D000157 ORTHO05D000311 3.0e-08 62.0 88 44.3
AT3G11110 Arabidopsis thaliana HOM05D000086 ORTHO05D000311 4.0e-08 61.6 95 45.3
A05p38160 Brassica napus HOM05D000086 ORTHO05D000311 4.0e-08 61.6 97 45.4
BraA05t22609Z Brassica rapa HOM05D000086 ORTHO05D000311 4.0e-08 61.6 97 45.4
Lsat_1_v5_gn_9_62281 Lactuca sativa HOM05D000086 ORTHO05D000311 4.0e-08 61.6 87 47.1
Aa31LG3G4280 Aethionema arabicum HOM05D000086 ORTHO05D000311 6.7e-08 60.8 84 47.6
THA.LOC104826846 Tarenaya hassleriana HOM05D000086 ORTHO05D000311 8.8e-08 60.5 85 47.1
BcaC05g29402 Brassica carinata HOM05D000086 ORTHO05D000311 2.6e-07 58.9 97 48.5
C05p56970 Brassica napus HOM05D000086 ORTHO05D000311 2.6e-07 58.9 97 48.5
Sp3g09430 Schrenkiella parvula HOM05D000086 ORTHO05D000311 5.7e-07 57.8 97 43.3
PGSC0003DMG400027719 Solanum tuberosum HOM05D000086 ORTHO05D000311 1.3e-06 56.6 86 41.9
vmacro10030 Vaccinium macrocarpon HOM05D000157 ORTHO05D000311 1.3e-06 56.6 80 40.0
Thhalv10022203m.g Eutrema salsugineum HOM05D000086 ORTHO05D000311 3.7e-06 55.1 97 41.2
MD11G1068200 Malus domestica HOM05D000086 ORTHO05D000311 3.7e-06 55.1 88 39.8
Gohir.D10G251500 Gossypium hirsutum HOM05D000157 ORTHO05D000311 6.3e-06 54.3 88 36.4
Gorai.011G292000 Gossypium raimondii HOM05D000157 ORTHO05D000311 6.3e-06 54.3 88 36.4


User provided reference genes

Program Settings