Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 2.4e-167 592.0 285 100.0
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 5.7e-121 438.0 281 75.1
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 1.7e-120 436.4 281 75.8
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 3.1e-119 432.2 277 74.7
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 2.1e-115 419.5 299 69.2
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 4.7e-115 418.3 280 71.4
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 2.0e-110 402.9 278 68.0
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 5.6e-108 394.8 274 66.8
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 7.3e-108 394.4 275 66.2
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 2.6e-105 386.0 271 66.1
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 9.8e-105 384.0 274 66.4
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 5.4e-103 378.3 273 64.5
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 1.2e-102 377.1 271 64.6
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 1.6e-102 376.7 275 64.7
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 1.0e-101 374.0 270 65.2
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 8.6e-101 370.9 274 61.7
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 3.3e-100 369.0 273 64.1
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 4.3e-100 368.6 274 63.1
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 2.1e-99 366.3 272 63.6
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 6.2e-99 364.8 275 63.6
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 6.2e-99 364.8 268 63.8
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 6.2e-99 364.8 298 62.1
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 5.2e-98 361.7 280 60.0
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 5.8e-97 358.2 287 61.3
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 1.3e-96 357.1 278 60.8
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 3.7e-96 355.5 275 60.7
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 4.9e-96 355.1 270 63.0
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 2.4e-95 352.8 252 63.9
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 5.4e-95 351.7 269 61.7
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 1.6e-94 350.1 327 54.7
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 2.1e-94 349.7 274 61.3
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 3.5e-94 349.0 266 60.9
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 3.5e-94 349.0 271 64.6
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 4.6e-94 348.6 270 58.1
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 4.6e-94 348.6 269 60.2
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 7.8e-94 347.8 273 58.6
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 1.0e-93 347.4 270 61.1
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 1.0e-93 347.4 256 61.7
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 2.3e-93 346.3 274 57.7
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 3.0e-93 345.9 270 61.5
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 5.0e-93 345.1 255 59.6
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 1.1e-92 344.0 292 57.5
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 5.6e-92 341.7 292 57.2
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 5.6e-92 341.7 272 58.8
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 7.3e-92 341.3 269 58.7
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 9.5e-92 340.9 287 60.3
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 4.7e-91 338.6 275 58.2
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 3.1e-90 335.9 245 62.9
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 4.0e-90 335.5 277 61.0
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 6.8e-90 334.7 268 59.7
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 1.5e-89 333.6 269 61.3
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 3.4e-89 332.4 344 51.7
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 4.9e-88 328.6 269 60.2
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 1.1e-87 327.4 256 59.8
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 1.4e-87 327.0 276 58.3
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 3.2e-87 325.9 274 54.4
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 5.4e-87 325.1 275 57.1
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 5.4e-87 325.1 276 57.6
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 7.1e-87 324.7 300 52.0
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 1.2e-86 323.9 276 56.9
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 2.1e-86 323.2 274 59.5
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 3.5e-86 322.4 269 55.8
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 6.0e-86 321.6 227 67.8
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 6.0e-86 321.6 243 62.6
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 5.1e-85 318.5 274 56.2
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 8.6e-85 317.8 275 55.3
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 1.5e-84 317.0 332 47.3
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 5.6e-84 315.1 277 56.0
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 1.2e-83 313.9 275 56.0
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 4.7e-83 312.0 268 55.6
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 8.1e-83 311.2 275 55.6
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 1.8e-82 310.1 248 59.3
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.5e-81 307.0 280 56.8
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 2.6e-81 306.2 265 52.1
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 5.8e-81 305.1 287 56.1
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 2.9e-80 302.8 379 42.5
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 2.4e-79 299.7 252 54.0
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 1.7e-77 293.5 257 51.0
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 5.1e-77 292.0 256 55.5
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 1.6e-75 287.0 235 56.2
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 2.8e-75 286.2 207 64.7
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 6.2e-75 285.0 330 46.4
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 1.4e-74 283.9 266 54.5
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 1.4e-74 283.9 202 65.8
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 5.3e-74 282.0 272 51.8
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 9.9e-73 277.7 273 52.0
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 6.4e-72 275.0 207 61.4
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 4.2e-71 272.3 282 48.9
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 4.2e-71 272.3 206 62.6
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 7.1e-71 271.6 202 62.9
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 1.3e-69 267.3 227 54.6
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 1.7e-69 266.9 202 63.9
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 1.7e-69 266.9 252 50.8
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 2.5e-68 263.1 219 58.0
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 2.5e-68 263.1 202 62.9
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 5.6e-68 261.9 200 59.0
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 1.3e-67 260.8 200 58.5
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 1.4e-66 257.3 193 61.7
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 5.8e-65 251.9 239 53.1
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 2.9e-64 249.6 215 56.3
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 3.5e-54 216.1 180 57.8
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 4.8e-51 205.7 281 40.2
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 1.8e-50 203.8 355 35.2
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 2.6e-49 199.9 187 50.8
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 1.7e-48 197.2 238 42.4
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 9.3e-47 191.4 210 46.7
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 9.3e-47 191.4 275 37.8
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 8.7e-45 184.9 225 43.1
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 4.3e-44 182.6 136 60.3
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 1.2e-41 174.5 175 51.4
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 4.5e-33 146.0 173 39.3
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 1.1e-26 124.8 182 37.4
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 1.4e-26 124.4 167 41.9
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 4.1e-26 122.9 123 52.0
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 7.7e-25 118.6 157 43.9
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 2.6e-20 103.6 92 54.3
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 4.5e-17 92.8 240 28.3
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 8.8e-13 78.6 164 29.3
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 1.3e-11 74.7 57 59.6
Lsat_1_v5_gn_5_133280 Lactuca sativa HOM05D005717 ORTHO05D007221 2.9e-08 63.5 73 45.2
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 5.5e-07 59.3 73 45.2
HanXRQChr08g0221941 Helianthus annuus HOM05D006653 ORTHO05D008346 4.7e-06 56.2 68 47.1


User provided reference genes

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