Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold60G20904 Striga asiatica HOM05D007061 ORTHO05D009017 1.3e-64 249.6 127 100.0
SGA_v2.0_scaffold112G31643 Striga asiatica HOM05D007061 ORTHO05D009017 3.7e-64 248.1 127 99.2
SGA_v2.0_scaffold186G40180 Striga asiatica HOM05D007061 ORTHO05D009017 8.1e-51 203.8 107 96.3
SalBow8G1458 Salvia bowleyana HOM05D007061 ORTHO05D009017 4.9e-40 167.9 109 79.8
Potri.010G173800 Populus trichocarpa HOM05D007061 ORTHO05D009017 6.4e-40 167.5 103 81.6
SalBow8G1251 Salvia bowleyana HOM05D007061 ORTHO05D009017 8.4e-40 167.2 109 78.9
unitig_37.g12195 Utricularia gibba HOM05D007061 ORTHO05D009017 2.4e-39 165.6 110 78.2
Migut.M01505 Erythranthe guttata HOM05D007061 ORTHO05D009017 3.2e-39 165.2 117 76.1
Sabra10G0133700 Salix brachista HOM05D007061 ORTHO05D009017 5.4e-39 164.5 103 80.6
arahy.Tifrunner.gnm1.ann1.R5CYRF Arachis hypogaea HOM05D007061 ORTHO05D009017 7.1e-39 164.1 99 84.8
Psat4g170560 Pisum sativum HOM05D007061 ORTHO05D009017 1.2e-38 163.3 113 76.1
QL04p093744 Quercus lobata HOM05D007061 ORTHO05D009017 1.2e-38 163.3 100 84.0
PSO675G0660 Papaver somniferum HOM05D007061 ORTHO05D009017 1.6e-38 162.9 101 81.2
PGR044G2241 Punica granatum HOM05D007061 ORTHO05D009017 2.1e-38 162.5 105 79.0
Ca_23083_v3 Cicer arietinum L. HOM05D007061 ORTHO05D009017 2.7e-38 162.2 102 81.4
COL.COLO4_24973 Corchorus olitorius HOM05D007061 ORTHO05D009017 2.7e-38 162.2 91 86.8
Glyma.08G234700 Glycine max HOM05D007061 ORTHO05D009017 6.0e-38 161.0 109 77.1
PSO675G3863 Papaver somniferum HOM05D007061 ORTHO05D009017 6.0e-38 161.0 93 84.9
TAR627G0473 Trochodendron aralioides HOM05D007061 ORTHO05D009017 6.0e-38 161.0 100 79.0
arahy.Tifrunner.gnm1.ann1.69KP4R Arachis hypogaea HOM05D007061 ORTHO05D009017 1.8e-37 159.5 99 84.8
arahy.Tifrunner.gnm1.ann1.RLLR5G Arachis hypogaea HOM05D007061 ORTHO05D009017 1.8e-37 159.5 99 84.8
FvH4_3g14100 Fragaria vesca HOM05D007061 ORTHO05D009017 3.0e-37 158.7 103 76.7
FAN11G3441 Fragaria x ananassa HOM05D007061 ORTHO05D009017 3.0e-37 158.7 103 76.7
TWI59G0237 Tripterygium wilfordii HOM05D007061 ORTHO05D009017 3.0e-37 158.7 105 77.1
VMungo1127G1118 Vigna mungo HOM05D007061 ORTHO05D009017 3.9e-37 158.3 101 80.2
CANSAT35G1572 Cannabis sativa HOM05D007061 ORTHO05D009017 8.7e-37 157.1 101 76.2
Ciclev10004974m.g Citrus clementina HOM05D007061 ORTHO05D009017 8.7e-37 157.1 107 75.7
Atru.chr1.57 Acer truncatum HOM05D007061 ORTHO05D009017 1.1e-36 156.8 101 81.2
ECA240G0752 Erigeron canadensis HOM05D007061 ORTHO05D009017 1.1e-36 156.8 95 81.1
MD10G1216400 Malus domestica HOM05D007061 ORTHO05D009017 1.1e-36 156.8 101 79.2
ClCG02G018710 Citrullus lanatus HOM05D007061 ORTHO05D009017 1.5e-36 156.4 107 78.5
RcHm_v2.0_Chr5g0023411 Rosa chinensis HOM05D007061 ORTHO05D009017 1.5e-36 156.4 103 75.7
TPR.G9404 Trifolium pratense HOM05D007061 ORTHO05D009017 1.5e-36 156.4 102 78.4
Gohir.A07G044000 Gossypium hirsutum HOM05D007061 ORTHO05D009017 1.9e-36 156.0 93 82.8
Gohir.D07G048400 Gossypium hirsutum HOM05D007061 ORTHO05D009017 1.9e-36 156.0 90 84.4
CsaV3_6G013460 Cucumis sativus L. HOM05D007061 ORTHO05D009017 3.3e-36 155.2 107 77.6
Duzib213G0730 Durio zibethinus HOM05D007061 ORTHO05D009017 3.3e-36 155.2 90 86.7
Sc03g0005020 Simmondsia chinensis HOM05D007061 ORTHO05D009017 3.3e-36 155.2 102 81.4
Lj3g0003258 Lotus japonicus HOM05D007061 ORTHO05D009017 4.3e-36 154.8 101 79.2
Manes.16G047900 Manihot esculenta HOM05D007061 ORTHO05D009017 4.3e-36 154.8 108 77.8
Aqoxy2G00253 Aquilegia oxysepala HOM05D007061 ORTHO05D009017 5.6e-36 154.5 104 76.9
FAN25G0842 Fragaria x ananassa HOM05D007061 ORTHO05D009017 7.4e-36 154.1 95 80.0
Gorai.001G051600 Gossypium raimondii HOM05D007061 ORTHO05D009017 7.4e-36 154.1 90 83.3
Peaxi162Scf00452g00232 Petunia axillaris HOM05D007061 ORTHO05D009017 9.6e-36 153.7 103 73.8
THA.LOC104810275 Tarenaya hassleriana HOM05D007061 ORTHO05D009017 1.3e-35 153.3 91 82.4
Lsat_1_v5_gn_7_70001 Lactuca sativa HOM05D007061 ORTHO05D009017 1.6e-35 152.9 102 76.5
Eucgr.K03462 Eucalyptus grandis HOM05D007061 ORTHO05D009017 2.1e-35 152.5 105 74.3
MELO3C019630.2 Cucumis melo HOM05D007061 ORTHO05D009017 3.7e-35 151.8 107 75.7
Lalb_Chr03g0031881 Lupinus albus HOM05D007061 ORTHO05D009017 3.7e-35 151.8 82 86.6
Sed0001021 Sechium edule HOM05D007061 ORTHO05D009017 4.8e-35 151.4 103 77.7
Dinv42463 Davidia involucrata HOM05D007061 ORTHO05D009017 6.2e-35 151.0 91 82.4
Actinidia24658 Actinidia chinensis HOM05D007061 ORTHO05D009017 8.1e-35 150.6 109 71.6
Actinidia26210 Actinidia chinensis HOM05D007061 ORTHO05D009017 8.1e-35 150.6 109 71.6
ATR0763G190 Amborella trichopoda HOM05D007061 ORTHO05D009017 8.1e-35 150.6 86 83.7
Nn7g38366 Nelumbo nucifera HOM05D007061 ORTHO05D009017 8.1e-35 150.6 106 72.6
Aa31LG10G30 Aethionema arabicum HOM05D007061 ORTHO05D009017 1.4e-34 149.8 91 78.0
Thhalv10011478m.g Eutrema salsugineum HOM05D007061 ORTHO05D009017 1.4e-34 149.8 104 73.1
Nitab4.5_0000029g0190 Nicotiana tabacum HOM05D007061 ORTHO05D009017 1.4e-34 149.8 100 74.0
Thecc.07G189200 Theobroma cacao HOM05D007061 ORTHO05D009017 1.4e-34 149.8 109 72.5
BcaB02g10820 Brassica carinata HOM05D007061 ORTHO05D009017 2.4e-34 149.1 97 74.2
Hma1.2p1_0151F.1_g067030 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 2.4e-34 149.1 91 81.3
Zm00001eb233280 Zea mays HOM05D007061 ORTHO05D009017 3.1e-34 148.7 89 78.7
Sp1g41850 Schrenkiella parvula HOM05D007061 ORTHO05D009017 5.3e-34 147.9 106 72.6
CiPaw.11G057200 Carya illinoinensis HOM05D007061 ORTHO05D009017 6.9e-34 147.5 106 69.8
Lj2A10G39 Lonicera japonica HOM05D007061 ORTHO05D009017 9.0e-34 147.1 77 90.9
HPP92_028076 Vanilla planifolia HOM05D007061 ORTHO05D009017 9.0e-34 147.1 108 68.5
AT1G54310 Arabidopsis thaliana HOM05D007061 ORTHO05D009017 1.2e-33 146.7 86 83.7
CARHR045980 Cardamine hirsuta HOM05D007061 ORTHO05D009017 1.2e-33 146.7 86 83.7
Prupe.4G128300 Prunus persica HOM05D007061 ORTHO05D009017 1.2e-33 146.7 85 82.4
BcaC05g28094 Brassica carinata HOM05D007061 ORTHO05D009017 1.5e-33 146.4 78 88.5
A05p26620 Brassica napus HOM05D007061 ORTHO05D009017 1.5e-33 146.4 78 88.5
C05p41210 Brassica napus HOM05D007061 ORTHO05D009017 1.5e-33 146.4 78 88.5
BolC5t32863H Brassica oleracea HOM05D007061 ORTHO05D009017 1.5e-33 146.4 78 88.5
BraA05t21537Z Brassica rapa HOM05D007061 ORTHO05D009017 1.5e-33 146.4 78 88.5
Cc05_g16540 Coffea canephora HOM05D007061 ORTHO05D009017 1.5e-33 146.4 107 70.1
AL1G64530 Arabidopsis lyrata HOM05D007061 ORTHO05D009017 4.5e-33 144.8 86 82.6
HanXRQChr03g0080291 Helianthus annuus HOM05D007061 ORTHO05D009017 5.8e-33 144.4 98 76.5
vmacro11681 Vaccinium macrocarpon HOM05D007061 ORTHO05D009017 5.8e-33 144.4 77 87.0
CSS0041382 Camellia sinensis var. sinensis HOM05D007061 ORTHO05D009017 9.9e-33 143.7 75 88.0
CAN.G943.59 Capsicum annuum HOM05D007061 ORTHO05D009017 1.3e-32 143.3 110 70.0
Rhsim06G0244000 Rhododendron simsii HOM05D007061 ORTHO05D009017 2.9e-32 142.1 110 66.4
RcHm_v2.0_Chr1g0324361 Rosa chinensis HOM05D007061 ORTHO05D009017 2.9e-32 142.1 74 89.2
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 6.4e-32 141.0 106 67.0
AUR62037650 Chenopodium quinoa HOM05D007061 ORTHO05D009017 1.9e-31 139.4 78 85.9
FAN16G1770 Fragaria x ananassa HOM05D007061 ORTHO05D009017 2.3e-29 132.5 93 74.2
SEGI_33801 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 3.9e-29 131.7 94 64.9
AagrBONN_evm.TU.Sc2ySwM_228.3482 Anthoceros agrestis HOM05D007061 ORTHO05D009017 1.8e-26 122.9 79 69.6
Pp3c22_13410 Physcomitrium patens HOM05D007061 ORTHO05D009017 2.4e-26 122.5 116 53.4
SMO145G0248 Selaginella moellendorffii HOM05D007061 ORTHO05D009017 1.2e-25 120.2 80 67.5
Phvul.011G179100 Phaseolus vulgaris HOM05D007061 ORTHO05D009017 3.8e-24 115.2 59 89.8
GSVIVG01036723001 Vitis vinifera HOM05D007061 ORTHO05D009017 1.4e-23 113.2 57 91.2
Haze_07765 Corylus avellana HOM05D007061 ORTHO05D009017 2.5e-23 112.5 57 91.2
Mapoly0013s0085 Marchantia polymorpha HOM05D007061 ORTHO05D009017 5.5e-23 111.3 77 63.6
DCAR_009658 Daucus carota HOM05D007061 ORTHO05D009017 9.3e-23 110.5 57 87.7
Carub.0001s4486 Capsella rubella HOM05D007061 ORTHO05D009017 2.1e-22 109.4 57 86.0
Hma1.2p1_0151F.1_g067050 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 6.7e-21 104.4 57 84.2
Nitab4.5_0002862g0050 Nicotiana tabacum HOM05D007061 ORTHO05D009017 5.7e-20 101.3 96 56.2
PRCOL_00003223 Prasinoderma coloniale HOM05D007061 ORTHO05D009017 5.9e-17 91.3 75 50.7
Cre16.g649400 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 3.8e-16 88.6 76 55.3
Os02g0173700 Oryza sativa ssp. japonica HOM05D007061 ORTHO05D009017 9.7e-12 73.9 37 89.2
MCO09G574 Micromonas commoda HOM05D007061 ORTHO05D009017 1.8e-10 69.7 84 40.5


User provided reference genes

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