Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 2.6e-95 352.1 177 100.0
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 1.0e-59 233.8 178 71.3
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 6.6e-59 231.1 179 69.8
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 1.1e-58 230.3 179 69.8
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 1.5e-58 229.9 176 69.9
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 2.5e-58 229.2 172 66.3
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 4.3e-58 228.4 177 71.8
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 5.6e-58 228.0 175 68.0
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 2.1e-57 226.1 180 68.3
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 4.7e-57 224.9 174 66.7
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 8.1e-57 224.2 178 68.0
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 1.1e-56 223.8 175 68.6
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 1.4e-56 223.4 178 68.5
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 2.3e-56 222.6 183 68.3
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 3.1e-56 222.2 177 67.8
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 5.2e-56 221.5 179 69.3
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 5.2e-56 221.5 179 67.0
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 8.9e-56 220.7 175 66.3
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 1.2e-55 220.3 176 66.5
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 2.6e-55 219.2 173 67.6
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 3.4e-55 218.8 177 65.0
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 4.4e-55 218.4 173 67.1
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 7.6e-55 217.6 173 64.7
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 7.6e-55 217.6 181 63.0
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 9.9e-55 217.2 174 66.1
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 1.3e-54 216.9 171 69.6
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 1.3e-54 216.9 179 62.6
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 1.3e-54 216.9 182 64.3
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 6.4e-54 214.5 147 74.8
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 6.4e-54 214.5 176 66.5
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 8.3e-54 214.2 173 65.9
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 1.1e-53 213.8 177 65.0
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 1.4e-53 213.4 182 64.8
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 2.4e-53 212.6 176 65.3
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 7.1e-53 211.1 176 64.8
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 9.2e-53 210.7 176 64.2
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 9.2e-53 210.7 176 64.8
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 9.2e-53 210.7 138 76.8
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 3.5e-52 208.8 137 77.4
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 3.5e-52 208.8 173 63.6
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 3.5e-52 208.8 173 63.6
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 4.6e-52 208.4 121 83.5
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 4.6e-52 208.4 174 63.8
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 6.0e-52 208.0 173 63.0
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 6.0e-52 208.0 130 78.5
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 7.8e-52 207.6 173 63.0
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 7.8e-52 207.6 173 61.8
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 7.8e-52 207.6 173 63.0
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 1.7e-51 206.5 175 62.3
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 1.7e-51 206.5 166 65.1
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 2.3e-51 206.1 150 72.0
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 2.3e-51 206.1 148 73.0
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 3.0e-51 205.7 153 71.9
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 3.0e-51 205.7 145 72.4
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 6.6e-51 204.5 151 70.9
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 6.6e-51 204.5 151 70.9
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 6.6e-51 204.5 161 68.3
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 8.6e-51 204.1 174 62.6
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 8.6e-51 204.1 174 62.6
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 8.6e-51 204.1 174 62.6
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 1.1e-50 203.8 177 63.8
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 1.5e-50 203.4 124 78.2
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 1.5e-50 203.4 119 84.9
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 2.5e-50 202.6 174 62.1
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 2.5e-50 202.6 174 61.5
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 5.6e-50 201.4 174 62.6
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 7.3e-50 201.1 174 63.2
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 7.3e-50 201.1 174 63.2
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 7.3e-50 201.1 174 63.2
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 7.3e-50 201.1 119 80.7
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 7.3e-50 201.1 132 72.0
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 9.6e-50 200.7 173 63.0
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 9.6e-50 200.7 173 63.0
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 1.2e-49 200.3 176 64.8
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 1.2e-49 200.3 173 61.3
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 1.6e-49 199.9 141 73.0
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 1.6e-49 199.9 173 61.8
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 2.1e-49 199.5 144 68.8
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 2.8e-49 199.1 181 59.7
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 3.6e-49 198.7 119 82.4
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 4.7e-49 198.4 147 67.3
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 6.2e-49 198.0 144 68.8
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 1.4e-48 196.8 173 59.5
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 1.8e-48 196.4 119 79.0
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 2.4e-48 196.1 196 57.1
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 5.2e-48 194.9 181 60.8
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 6.8e-48 194.5 126 75.4
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 8.9e-48 194.1 174 60.3
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 2.0e-47 193.0 120 79.2
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 4.4e-47 191.8 173 60.7
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 2.9e-46 189.1 135 66.7
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 5.4e-45 184.9 128 68.0
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 7.1e-45 184.5 152 67.1
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 3.5e-44 182.2 181 55.2
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 2.3e-43 179.5 113 76.1
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 6.6e-43 177.9 148 63.5
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 4.0e-40 168.7 118 67.8
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 4.0e-40 168.7 124 65.3
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 1.5e-39 166.8 117 66.7
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 2.6e-39 166.0 180 53.3
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 3.2e-37 159.1 147 58.5
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 3.2e-37 159.1 144 61.1
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 7.3e-34 147.9 103 68.9
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 7.3e-34 147.9 103 68.9
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 7.9e-28 127.9 120 64.2
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 1.1e-24 117.5 175 46.9
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 2.4e-24 116.3 123 52.0
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 3.4e-23 112.5 58 86.2
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 1.4e-21 107.1 97 62.9
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 1.9e-21 106.7 67 70.1
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 9.3e-21 104.4 117 57.3
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 2.8e-17 92.8 62 75.8
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 2.9e-06 56.2 94 45.7
unitig_90.g27575 Utricularia gibba HOM05D007229 ORTHO05D009131 3.8e-06 55.8 70 57.1


User provided reference genes

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