Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold60G20876 Striga asiatica HOM05D004331 ORTHO05D004984 1.7e-194 682.6 355 100.0
Migut.F00564 Erythranthe guttata HOM05D004331 ORTHO05D004984 1.2e-123 447.2 354 67.8
MSTRG.156 Avicennia marina HOM05D004331 ORTHO05D004984 3.3e-118 429.1 354 63.3
SalBow3G0869 Salvia bowleyana HOM05D004331 ORTHO05D004984 1.2e-115 420.6 338 65.4
SGA_v2.0_scaffold397G50761 Striga asiatica HOM05D004331 ORTHO05D004984 7.9e-112 407.9 352 62.5
Dinv34508 Davidia involucrata HOM05D004331 ORTHO05D004984 6.9e-108 394.8 363 60.1
unitig_88.g27825 Utricularia gibba HOM05D004331 ORTHO05D004984 5.9e-107 391.7 343 61.2
Nitab4.5_0009756g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 1.0e-106 391.0 354 59.3
CSS0028422 Camellia sinensis var. sinensis HOM05D004331 ORTHO05D004984 2.2e-101 373.2 349 59.0
Actinidia01013 Actinidia chinensis HOM05D004331 ORTHO05D004984 2.8e-101 372.9 344 59.0
Lj1A969T93 Lonicera japonica HOM05D004331 ORTHO05D004984 4.8e-101 372.1 343 60.1
Hma1.2p1_0264F.1_g105850 Hydrangea macrophylla HOM05D004331 ORTHO05D004984 6.3e-101 371.7 343 60.1
HanXRQChr07g0204811 Helianthus annuus HOM05D004331 ORTHO05D004984 1.8e-100 370.2 362 56.1
PGSC0003DMG400005253 Solanum tuberosum HOM05D004331 ORTHO05D004984 3.4e-99 365.9 344 56.7
TAR636G1774 Trochodendron aralioides HOM05D004331 ORTHO05D004984 7.7e-99 364.8 273 67.8
Solyc03g095470.3 Solanum lycopersicum HOM05D004331 ORTHO05D004984 1.3e-98 364.0 341 56.3
Manes.10G004100 Manihot esculenta HOM05D004331 ORTHO05D004984 1.7e-98 363.6 375 55.2
Sopen03g025450 Solanum pennellii HOM05D004331 ORTHO05D004984 1.7e-98 363.6 341 56.3
CAN.G30.2 Capsicum annuum HOM05D004331 ORTHO05D004984 2.9e-98 362.8 340 57.1
Lsat_1_v5_gn_2_127600 Lactuca sativa HOM05D004331 ORTHO05D004984 5.0e-98 362.1 347 56.2
Sed0000286 Sechium edule HOM05D004331 ORTHO05D004984 5.0e-98 362.1 354 56.5
DCAR_020157 Daucus carota HOM05D004331 ORTHO05D004984 2.5e-97 359.8 341 56.9
Ciclev10031884m.g Citrus clementina HOM05D004331 ORTHO05D004984 7.2e-97 358.2 343 58.0
ClCG11G005520 Citrullus lanatus HOM05D004331 ORTHO05D004984 1.6e-96 357.1 361 55.1
TWI73G1241 Tripterygium wilfordii HOM05D004331 ORTHO05D004984 1.6e-96 357.1 249 70.7
Peaxi162Scf00073g02119 Petunia axillaris HOM05D004331 ORTHO05D004984 2.1e-96 356.7 354 55.9
Duzib128G0601 Durio zibethinus HOM05D004331 ORTHO05D004984 2.7e-96 356.3 269 65.8
CANSAT56G0386 Cannabis sativa HOM05D004331 ORTHO05D004984 3.6e-96 355.9 323 59.1
Atru.chr12.214 Acer truncatum HOM05D004331 ORTHO05D004984 2.2e-93 346.7 334 55.7
vmacro09950 Vaccinium macrocarpon HOM05D004331 ORTHO05D004984 3.7e-93 345.9 379 52.5
Thecc.10G186200 Theobroma cacao HOM05D004331 ORTHO05D004984 4.8e-93 345.5 318 58.8
Nn5g26801 Nelumbo nucifera HOM05D004331 ORTHO05D004984 6.3e-93 345.1 340 55.6
MELO3C022105.2 Cucumis melo HOM05D004331 ORTHO05D004984 1.4e-92 344.0 264 64.4
Rhsim09G0186700 Rhododendron simsii HOM05D004331 ORTHO05D004984 3.1e-92 342.8 387 51.7
Hund13431 Selenicereus undatus HOM05D004331 ORTHO05D004984 4.1e-92 342.4 254 66.1
CsaV3_5G039270 Cucumis sativus L. HOM05D004331 ORTHO05D004984 5.3e-92 342.0 273 62.3
Potri.019G062200 Populus trichocarpa HOM05D004331 ORTHO05D004984 9.1e-92 341.3 290 60.7
Cfa001189 Carpinus fangiana HOM05D004331 ORTHO05D004984 2.0e-91 340.1 315 59.7
Haze_17376 Corylus avellana HOM05D004331 ORTHO05D004984 2.0e-91 340.1 315 59.4
C04p02240 Brassica napus HOM05D004331 ORTHO05D004984 2.6e-91 339.7 360 53.3
Carub.0005s2321 Capsella rubella HOM05D004331 ORTHO05D004984 2.6e-91 339.7 251 66.9
Cpa.g.sc19.35 Carica papaya HOM05D004331 ORTHO05D004984 2.6e-91 339.7 287 60.6
CARHR135900 Cardamine hirsuta HOM05D004331 ORTHO05D004984 3.5e-91 339.3 330 54.2
Actinidia07780 Actinidia chinensis HOM05D004331 ORTHO05D004984 4.5e-91 339.0 292 61.6
Duzib114G0903 Durio zibethinus HOM05D004331 ORTHO05D004984 4.5e-91 339.0 324 56.2
AT3G56430 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 5.9e-91 338.6 250 66.8
Sc11g0006070 Simmondsia chinensis HOM05D004331 ORTHO05D004984 1.0e-90 337.8 250 66.8
Phvul.009G042200 Phaseolus vulgaris HOM05D004331 ORTHO05D004984 1.3e-90 337.4 279 62.4
Sp4g23120 Schrenkiella parvula HOM05D004331 ORTHO05D004984 2.2e-90 336.7 326 55.2
Sp5g06060 Schrenkiella parvula HOM05D004331 ORTHO05D004984 2.2e-90 336.7 247 66.8
AL5G37760 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 3.8e-90 335.9 250 66.4
Eucgr.L02349 Eucalyptus grandis HOM05D004331 ORTHO05D004984 1.9e-89 333.6 260 62.7
VMungo1309G0248 Vigna mungo HOM05D004331 ORTHO05D004984 1.9e-89 333.6 277 62.1
Thhalv10016808m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 2.5e-89 333.2 241 67.2
PGR142G0580 Punica granatum HOM05D004331 ORTHO05D004984 2.5e-89 333.2 335 55.5
Aa31LG10G11310 Aethionema arabicum HOM05D004331 ORTHO05D004984 3.2e-89 332.8 330 57.0
BcaC02g12734 Brassica carinata HOM05D004331 ORTHO05D004984 4.2e-89 332.4 292 58.9
Thhalv10006036m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 4.2e-89 332.4 320 57.8
COL.COLO4_19485 Corchorus olitorius HOM05D004331 ORTHO05D004984 5.5e-89 332.0 255 64.7
QL08p065166 Quercus lobata HOM05D004331 ORTHO05D004984 9.4e-89 331.3 238 67.2
Sabra19G0075700 Salix brachista HOM05D004331 ORTHO05D004984 9.4e-89 331.3 324 56.5
Gohir.D10G184000 Gossypium hirsutum HOM05D004331 ORTHO05D004984 1.2e-88 330.9 308 56.5
Gorai.011G206200 Gossypium raimondii HOM05D004331 ORTHO05D004984 1.2e-88 330.9 308 56.5
AL4G38690 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 1.6e-88 330.5 319 54.9
Gohir.A10G177400 Gossypium hirsutum HOM05D004331 ORTHO05D004984 1.6e-88 330.5 254 62.6
Psat5g069640 Pisum sativum HOM05D004331 ORTHO05D004984 1.6e-88 330.5 275 62.9
TPR.G13966 Trifolium pratense HOM05D004331 ORTHO05D004984 1.6e-88 330.5 268 63.4
A05p01900 Brassica napus HOM05D004331 ORTHO05D004984 2.1e-88 330.1 348 52.9
BraA05t19188Z Brassica rapa HOM05D004331 ORTHO05D004984 2.1e-88 330.1 348 52.9
MBI15_g36678_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 2.1e-88 330.1 237 68.8
A09p49380 Brassica napus HOM05D004331 ORTHO05D004984 2.7e-88 329.7 316 57.0
BraA09t40391Z Brassica rapa HOM05D004331 ORTHO05D004984 2.7e-88 329.7 316 57.0
ECA238G1814 Erigeron canadensis HOM05D004331 ORTHO05D004984 2.7e-88 329.7 221 72.4
THA.LOC104824369 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 6.1e-88 328.6 329 54.4
ATR1127G084 Amborella trichopoda HOM05D004331 ORTHO05D004984 8.0e-88 328.2 258 65.9
AT2G40800 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 8.0e-88 328.2 244 66.0
Eucgr.G03152 Eucalyptus grandis HOM05D004331 ORTHO05D004984 1.0e-87 327.8 260 62.3
Sabra19G0081100 Salix brachista HOM05D004331 ORTHO05D004984 1.0e-87 327.8 324 55.9
Ca_16853_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 1.4e-87 327.4 268 62.3
Ca_29501_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 1.4e-87 327.4 268 62.3
Glyma.06G141000 Glycine max HOM05D004331 ORTHO05D004984 1.4e-87 327.4 275 61.5
EL10Ac2g02684 Beta vulgaris HOM05D004331 ORTHO05D004984 2.3e-87 326.6 303 58.4
Aqoxy4G03301 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 3.0e-87 326.2 243 66.3
CARHR166560 Cardamine hirsuta HOM05D004331 ORTHO05D004984 3.0e-87 326.2 315 57.5
AUR62032546 Chenopodium quinoa HOM05D004331 ORTHO05D004984 3.0e-87 326.2 288 59.0
BolC4t21871H Brassica oleracea HOM05D004331 ORTHO05D004984 5.2e-87 325.5 347 52.2
arahy.Tifrunner.gnm1.ann1.J1TSCZ Arachis hypogaea HOM05D004331 ORTHO05D004984 8.8e-87 324.7 317 55.8
arahy.Tifrunner.gnm1.ann1.M9I45E Arachis hypogaea HOM05D004331 ORTHO05D004984 1.5e-86 323.9 303 57.8
PSO017G4126 Papaver somniferum HOM05D004331 ORTHO05D004984 2.0e-86 323.6 244 66.0
BolC8t50795H Brassica oleracea HOM05D004331 ORTHO05D004984 4.4e-86 322.4 238 68.1
MD07G1237400 Malus domestica HOM05D004331 ORTHO05D004984 4.4e-86 322.4 329 53.8
Os01g0168300 Oryza sativa ssp. japonica HOM05D004331 ORTHO05D004984 4.4e-86 322.4 230 69.1
RcHm_v2.0_Chr1g0372681 Rosa chinensis HOM05D004331 ORTHO05D004984 4.4e-86 322.4 253 64.8
THA.LOC104814366 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 4.4e-86 322.4 333 54.1
FAN10G3590 Fragaria x ananassa HOM05D004331 ORTHO05D004984 5.7e-86 322.0 241 66.0
FvH4_7g26230 Fragaria vesca HOM05D004331 ORTHO05D004984 9.7e-86 321.2 241 66.0
FAN06G3213 Fragaria x ananassa HOM05D004331 ORTHO05D004984 9.7e-86 321.2 241 66.0
Glyma.04G223900 Glycine max HOM05D004331 ORTHO05D004984 1.7e-85 320.5 230 67.0
HPP92_012570 Vanilla planifolia HOM05D004331 ORTHO05D004984 1.7e-85 320.5 247 64.8
Dinv21866 Davidia involucrata HOM05D004331 ORTHO05D004984 4.8e-85 318.9 201 79.1
MD01G1171000 Malus domestica HOM05D004331 ORTHO05D004984 4.8e-85 318.9 231 66.2
PSO170G2208 Papaver somniferum HOM05D004331 ORTHO05D004984 4.8e-85 318.9 254 63.4
Medtr3g093690 Medicago truncatula HOM05D004331 ORTHO05D004984 3.1e-84 316.2 260 61.9
Lalb_Chr11g0067651 Lupinus albus HOM05D004331 ORTHO05D004984 9.1e-84 314.7 302 54.3
Lj1g0025811 Lotus japonicus HOM05D004331 ORTHO05D004984 2.0e-83 313.5 313 52.7
SEGI_36006 Sequoiadendron giganteum HOM05D004331 ORTHO05D004984 4.5e-83 312.4 268 61.2
Lalb_Chr08g0239281 Lupinus albus HOM05D004331 ORTHO05D004984 1.7e-82 310.5 242 63.6
AagrBONN_evm.TU.Sc2ySwM_340.90 Anthoceros agrestis HOM05D004331 ORTHO05D004984 4.4e-78 295.8 253 59.3
Pp3c7_18440 Physcomitrium patens HOM05D004331 ORTHO05D004984 5.7e-78 295.4 233 62.2
Nitab4.5_0018056g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 1.1e-76 291.2 281 56.2
Pp3c1_5190 Physcomitrium patens HOM05D004331 ORTHO05D004984 2.4e-76 290.0 230 61.3
SMO361G0183 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 3.5e-75 286.2 227 62.6
SMO199G0115 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.0e-74 284.6 228 61.8
Mapoly0158s0020 Marchantia polymorpha HOM05D004331 ORTHO05D004984 5.0e-74 282.3 316 48.1
Cc02_g05110 Coffea canephora HOM05D004331 ORTHO05D004984 2.5e-73 280.0 179 76.5
GSVIVG01032862001 Vitis vinifera HOM05D004331 ORTHO05D004984 1.6e-72 277.3 176 75.6
Actinidia13632 Actinidia chinensis HOM05D004331 ORTHO05D004984 4.7e-72 275.8 229 63.8
BcaC07g39957 Brassica carinata HOM05D004331 ORTHO05D004984 2.3e-71 273.5 317 50.2
C08p31740 Brassica napus HOM05D004331 ORTHO05D004984 2.2e-69 266.9 338 47.6
FAN01G2544 Fragaria x ananassa HOM05D004331 ORTHO05D004984 2.8e-69 266.5 171 75.4
CBR_g29882 Chara braunii HOM05D004331 ORTHO05D004984 4.1e-68 262.7 222 59.0
Oeu039397.2 Olea europaea HOM05D004331 ORTHO05D004984 5.9e-67 258.8 171 76.6
CiPaw.02G199300 Carya illinoinensis HOM05D004331 ORTHO05D004984 2.8e-61 240.0 235 56.6
AUR62030578 Chenopodium quinoa HOM05D004331 ORTHO05D004984 3.2e-60 236.5 155 74.2
Zm00001eb336450 Zea mays HOM05D004331 ORTHO05D004984 1.9e-57 227.3 153 73.2
CiPaw.01G307700 Carya illinoinensis HOM05D004331 ORTHO05D004984 1.6e-56 224.2 140 78.6
MSTRG.8387 Avicennia marina HOM05D004331 ORTHO05D004984 1.5e-54 217.6 355 41.4
Ah.10g029610 Amaranthus hybridus HOM05D000033 ORTHO05D000913 8.3e-53 211.8 147 70.7
SMO361G0787 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.8e-47 194.1 225 44.9
SMO361G0173 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 6.8e-47 192.2 225 44.4
BcaC04g21857 Brassica carinata HOM05D004331 ORTHO05D004984 5.1e-42 176.0 120 74.2
BcaC09g50949 Brassica carinata HOM05D004331 ORTHO05D004984 6.6e-42 175.6 120 74.2
BcaC02g11378 Brassica carinata HOM05D004331 ORTHO05D004984 1.1e-41 174.9 120 73.3
C04p16400 Brassica napus HOM05D004331 ORTHO05D004984 1.1e-41 174.9 120 73.3
C09p26570 Brassica napus HOM05D004331 ORTHO05D004984 9.5e-41 171.8 120 72.5
BolC9t55553H Brassica oleracea HOM05D004331 ORTHO05D004984 9.5e-41 171.8 120 72.5
Manes.03G048500 Manihot esculenta HOM05D004331 ORTHO05D004984 4.7e-40 169.5 375 35.5
BcaC09g50388 Brassica carinata HOM05D004331 ORTHO05D004984 2.3e-39 167.2 112 72.3
BolC1t02551H Brassica oleracea HOM05D004331 ORTHO05D004984 1.2e-38 164.9 112 71.4
C01p18940 Brassica napus HOM05D004331 ORTHO05D004984 1.3e-37 161.4 102 75.5
C01p26060 Brassica napus HOM05D004331 ORTHO05D004984 1.3e-37 161.4 112 70.5
BolC1t01820H Brassica oleracea HOM05D004331 ORTHO05D004984 1.3e-37 161.4 102 75.5
Cre05.g232752 Chlamydomonas reinhardtii HOM05D004331 ORTHO05D004984 3.7e-37 159.8 263 38.0
PRCOL_00001688 Prasinoderma coloniale HOM05D004331 ORTHO05D004984 8.3e-37 158.7 239 40.2
Carub.0004s2310 Capsella rubella HOM05D004331 ORTHO05D004984 5.1e-34 149.4 325 34.5
SHI31864 Sapria himalayana HOM05D004331 ORTHO05D004984 8.6e-34 148.7 91 78.0
Actinidia31642 Actinidia chinensis HOM05D004331 ORTHO05D004984 2.5e-33 147.1 154 55.8
Prupe.2G266500 Prunus persica HOM05D004331 ORTHO05D004984 2.8e-32 143.7 247 37.7
HPP92_012539 Vanilla planifolia HOM05D004331 ORTHO05D004984 1.1e-31 141.7 138 58.7
C03p81590 Brassica napus HOM05D004331 ORTHO05D004984 5.4e-28 129.4 92 73.9
BolC3t20429H Brassica oleracea HOM05D004331 ORTHO05D004984 5.4e-28 129.4 92 73.9
BcaC01g00580 Brassica carinata HOM05D003032 ORTHO05D003456 9.3e-28 128.6 92 72.8
BcaC04g23398 Brassica carinata HOM05D004331 ORTHO05D004984 5.6e-25 119.4 109 57.8
SGA_v2.0_scaffold6G03448 Striga asiatica HOM05D029701 ORTHO05D004984 6.2e-24 115.9 83 73.5
Aqoxy4G02083 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 3.8e-21 106.7 63 79.4
MBI15_g10655_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 8.4e-21 105.5 105 49.5
CiPaw.01G307900 Carya illinoinensis HOM05D004331 ORTHO05D004984 2.4e-20 104.0 94 56.4
MCO04G099 Micromonas commoda HOM05D004331 ORTHO05D004984 2.4e-20 104.0 298 28.2
Ah.10g029620 Amaranthus hybridus HOM05D004331 ORTHO05D004984 7.1e-20 102.4 88 54.5
Eucgr.G03162 Eucalyptus grandis HOM05D004331 ORTHO05D004984 7.1e-20 102.4 89 52.8
AUR62030577 Chenopodium quinoa HOM05D004331 ORTHO05D004984 1.0e-18 98.6 100 50.0
BolC9t53789H Brassica oleracea HOM05D004331 ORTHO05D004984 6.9e-15 85.9 62 69.4
SHI31865 Sapria himalayana HOM05D004331 ORTHO05D004984 2.0e-14 84.3 154 35.1
Zm00001eb123190 Zea mays HOM05D004331 ORTHO05D004984 2.0e-14 84.3 191 33.0
SHI31863 Sapria himalayana HOM05D004331 ORTHO05D004984 1.3e-13 81.6 68 63.2
VMungo0540G1227 Vigna mungo HOM05D004331 ORTHO05D004984 8.4e-13 79.0 69 59.4
BolC4t28360H Brassica oleracea HOM05D004331 ORTHO05D004984 2.1e-11 74.3 95 45.3
BraA04t18575Z Brassica rapa HOM05D004331 ORTHO05D016805 2.7e-11 73.9 44 79.5
C08p13890 Brassica napus HOM05D013285 ORTHO05D004984 1.8e-10 71.2 76 44.7
Oeu044180.2 Olea europaea HOM05D060731 ORTHO05D049468 3.3e-09 67.0 148 37.2


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