Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 1.8e-281 971.8 460 100.0
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 4.6e-253 877.5 460 89.3
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 2.3e-252 875.2 460 89.6
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 5.2e-249 864.0 460 87.8
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 5.2e-241 837.4 460 83.7
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 9.9e-240 833.2 460 83.7
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 1.1e-238 829.7 460 82.8
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 7.1e-238 827.0 460 82.8
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 6.6e-236 820.5 460 80.4
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 6.6e-236 820.5 460 82.6
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 6.6e-236 820.5 460 82.6
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 5.6e-235 817.4 460 80.2
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 7.3e-235 817.0 460 81.5
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.1e-234 815.5 461 81.8
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 2.8e-234 815.1 461 80.9
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 1.1e-233 813.1 460 81.5
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 1.1e-233 813.1 461 81.3
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 1.4e-233 812.8 460 81.3
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 1.8e-233 812.4 460 81.3
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 2.4e-233 812.0 460 81.3
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 2.4e-233 812.0 461 80.3
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 2.4e-233 812.0 461 81.8
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.1e-233 811.6 461 81.6
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 4.0e-233 811.2 475 77.7
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 4.4e-232 807.7 460 80.7
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 9.9e-232 806.6 460 81.7
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 1.3e-231 806.2 460 80.9
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 2.2e-231 805.4 460 80.0
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.8e-231 804.7 460 80.4
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 4.9e-231 804.3 460 79.8
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 4.9e-231 804.3 460 80.7
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 6.4e-231 803.9 460 80.4
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 6.4e-231 803.9 460 80.0
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 6.4e-231 803.9 461 80.5
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 8.4e-231 803.5 461 80.5
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 2.4e-230 802.0 460 80.0
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 3.2e-230 801.6 460 80.0
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 3.2e-230 801.6 460 78.9
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 4.2e-230 801.2 460 80.7
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 1.2e-229 799.7 462 80.7
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 1.6e-229 799.3 460 79.6
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 2.1e-229 798.9 460 79.3
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 2.7e-229 798.5 460 78.9
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 4.6e-229 797.7 462 79.9
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 7.8e-229 797.0 460 78.9
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 1.3e-228 796.2 460 80.4
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 3.0e-228 795.0 460 78.5
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 3.0e-228 795.0 460 78.7
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 5.1e-228 794.3 459 79.5
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 8.7e-228 793.5 460 78.7
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 2.5e-227 792.0 460 78.5
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 2.5e-227 792.0 460 78.5
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 3.3e-227 791.6 460 80.4
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 9.6e-227 790.0 460 80.2
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 1.6e-226 789.3 481 76.3
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 4.8e-226 787.7 460 77.2
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 1.8e-225 785.8 459 78.2
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 2.4e-225 785.4 460 78.5
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 3.1e-225 785.0 460 77.2
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 2.6e-224 781.9 460 77.4
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 4.4e-224 781.2 461 76.4
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 1.4e-222 776.2 453 77.3
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 2.1e-221 772.3 460 76.7
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 4.6e-221 771.2 460 76.7
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 6.0e-221 770.8 460 76.5
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 6.0e-221 770.8 460 76.7
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 1.3e-220 769.6 443 77.9
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.7e-220 769.2 460 78.0
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 3.9e-220 768.1 460 76.5
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 5.6e-219 764.2 460 77.6
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 4.0e-217 758.1 460 75.7
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 4.5e-216 754.6 456 75.2
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 7.6e-216 753.8 487 71.9
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 1.4e-214 749.6 460 75.7
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 1.8e-212 742.7 460 73.5
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 3.0e-212 741.9 458 73.1
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 3.3e-211 738.4 498 69.9
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 8.1e-210 733.8 460 73.9
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 2.4e-209 732.3 460 74.3
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 7.1e-206 720.7 460 72.8
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 1.0e-204 716.8 469 70.4
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 6.7e-204 714.1 460 71.7
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 3.0e-188 662.1 460 67.6
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 2.0e-187 659.4 454 65.4
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 4.3e-187 658.3 451 65.4
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 3.7e-186 655.2 493 62.7
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 4.8e-186 654.8 394 75.9
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.1e-185 652.1 451 65.0
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.2e-184 650.2 337 90.5
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 1.0e-180 637.1 457 66.3
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.1e-179 633.6 456 63.4
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 2.9e-175 619.0 341 83.6
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.1e-174 617.1 338 84.6
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 9.4e-174 614.0 462 58.7
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.0e-171 606.3 338 83.7
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.7e-170 603.2 342 81.9
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.7e-170 603.2 342 81.9
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 6.3e-170 601.3 337 83.1
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.1e-169 600.5 339 82.0
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 1.8e-169 599.7 321 85.7
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.1e-169 598.6 339 82.0
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 8.5e-167 590.9 338 80.8
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 5.2e-164 581.6 450 57.8
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.5e-158 563.5 296 86.5
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 9.5e-158 560.8 291 90.0
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.4e-153 546.2 297 85.9
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 5.9e-152 541.6 337 77.4
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.8e-148 530.0 307 81.8
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 1.7e-138 496.9 277 80.1
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.2e-133 478.4 291 77.3
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 4.0e-132 475.7 338 62.4
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 3.9e-127 459.1 292 72.9
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 6.4e-106 388.7 450 41.1
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 3.2e-97 359.8 484 38.0
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.3e-69 268.1 169 72.8
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.0e-52 209.1 110 84.5
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.0e-52 209.1 110 84.5
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.6e-51 208.0 110 83.6
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 4.5e-51 206.5 185 56.8
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 7.5e-38 162.5 99 76.8
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 1.8e-07 61.6 40 65.0


User provided reference genes

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