Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold60G20801 Striga asiatica HOM05D009630 ORTHO05D016321 6.9e-204 713.8 362 100.0
Os09g0297200 Oryza sativa ssp. japonica HOM05D009630 ORTHO05D016321 1.6e-27 127.9 164 49.4
HPP92_022459 Vanilla planifolia HOM05D001438 ORTHO05D001336 4.8e-24 116.3 208 40.9
Os09g0416250 Oryza sativa ssp. japonica HOM05D009630 ORTHO05D016321 3.5e-22 110.2 107 54.2
SGA_v2.0_scaffold306G48016 Striga asiatica HOM05D010075 ORTHO05D017268 4.7e-19 99.8 207 40.1
SGA_v2.0_scaffold229G43353 Striga asiatica HOM05D009630 ORTHO05D018137 1.8e-18 97.8 185 37.3
FAN22G0145 Fragaria x ananassa HOM05D009630 ORTHO05D016321 1.2e-17 95.1 173 40.5
Zm00001eb324190 Zea mays HOM05D010075 ORTHO05D017268 7.8e-14 82.4 152 41.4
Os01g0567533 Oryza sativa ssp. japonica HOM05D010075 ORTHO05D026014 2.3e-13 80.9 144 42.4
Os06g0141133 Oryza sativa ssp. japonica HOM05D010075 ORTHO05D017268 1.9e-12 77.8 152 43.4
Zm00001eb160000 Zea mays HOM05D010075 ORTHO05D026014 1.6e-11 74.7 139 43.2
SGA_v2.0_scaffold159G37693 Striga asiatica HOM05D010075 ORTHO05D026014 2.1e-11 74.3 130 43.1
SGA_v2.0_scaffold306G48014 Striga asiatica HOM05D009630 ORTHO05D016321 1.8e-10 71.2 107 43.9
Zm00001eb008820 Zea mays HOM05D010075 ORTHO05D016365 2.0e-09 67.8 152 41.4
SGA_v2.0_scaffold39G15284 Striga asiatica HOM05D009630 ORTHO05D016321 3.4e-09 67.0 207 33.8
PGSC0003DMG401018758 Solanum tuberosum HOM05D009630 ORTHO05D016321 9.8e-09 65.5 70 51.4
Zm00001eb423900 Zea mays HOM05D010075 ORTHO05D016365 6.4e-08 62.8 149 38.3
Os07g0206650 Oryza sativa ssp. japonica HOM05D009630 ORTHO05D016321 3.2e-07 60.5 107 40.2
Os03g0101400 Oryza sativa ssp. japonica HOM05D010075 ORTHO05D016365 1.6e-06 58.2 82 50.0
FAN26G1833 Fragaria x ananassa HOM05D009630 ORTHO05D016321 2.7e-06 57.4 59 55.9


User provided reference genes

Program Settings