Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 3.8e-160 568.2 294 100.0
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 1.3e-51 207.6 131 79.4
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 3.8e-51 206.1 129 77.5
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 4.6e-49 199.1 131 74.8
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 6.0e-49 198.7 131 77.1
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 1.3e-48 197.6 131 76.3
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 1.3e-48 197.6 134 74.6
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 1.8e-48 197.2 131 75.6
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 1.8e-48 197.2 131 73.3
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 6.7e-48 195.3 132 73.5
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 8.7e-48 194.9 133 73.7
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 8.7e-48 194.9 130 73.8
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 1.1e-47 194.5 132 73.5
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.1e-47 194.5 137 70.1
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.1e-47 194.5 137 70.1
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.1e-47 194.5 132 72.0
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 1.9e-47 193.7 131 71.8
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 1.9e-47 193.7 131 73.3
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 1.9e-47 193.7 136 70.6
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 2.5e-47 193.4 132 72.7
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 2.5e-47 193.4 133 71.4
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 3.3e-47 193.0 131 73.3
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 3.3e-47 193.0 131 73.3
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 3.3e-47 193.0 131 73.3
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 3.3e-47 193.0 131 73.3
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 4.3e-47 192.6 133 71.4
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 5.6e-47 192.2 131 71.8
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 7.4e-47 191.8 132 71.2
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 7.4e-47 191.8 132 71.2
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 7.4e-47 191.8 131 72.5
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 7.4e-47 191.8 133 71.4
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 9.6e-47 191.4 131 71.0
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 9.6e-47 191.4 124 76.6
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 9.6e-47 191.4 137 69.3
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 1.3e-46 191.0 131 71.8
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 1.3e-46 191.0 131 71.8
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 1.3e-46 191.0 134 70.1
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.3e-46 191.0 131 71.8
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.3e-46 191.0 131 71.8
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 1.6e-46 190.7 131 73.3
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 2.1e-46 190.3 131 71.8
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 2.1e-46 190.3 131 71.8
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 2.1e-46 190.3 130 71.5
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 2.1e-46 190.3 131 72.5
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 2.1e-46 190.3 131 71.0
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 2.1e-46 190.3 133 69.9
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 2.8e-46 189.9 131 71.8
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 2.8e-46 189.9 132 70.5
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 2.8e-46 189.9 131 71.0
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 2.8e-46 189.9 133 71.4
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 2.8e-46 189.9 133 70.7
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 3.7e-46 189.5 130 72.3
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 4.8e-46 189.1 131 71.0
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 4.8e-46 189.1 136 69.1
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 4.8e-46 189.1 133 69.9
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 6.2e-46 188.7 133 70.7
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 8.1e-46 188.3 131 71.0
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 8.1e-46 188.3 130 73.1
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 1.1e-45 188.0 133 69.2
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 1.4e-45 187.6 128 74.2
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.4e-45 187.6 129 69.8
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 3.1e-45 186.4 129 72.1
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 3.1e-45 186.4 129 71.3
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 5.3e-45 185.7 134 67.2
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 5.3e-45 185.7 131 69.5
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 5.3e-45 185.7 131 71.0
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 6.9e-45 185.3 133 69.9
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 9.0e-45 184.9 131 69.5
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 1.2e-44 184.5 132 72.0
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 1.2e-44 184.5 137 68.6
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 1.2e-44 184.5 128 71.1
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 1.2e-44 184.5 130 71.5
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 1.5e-44 184.1 131 69.5
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 2.0e-44 183.7 128 70.3
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 2.0e-44 183.7 131 69.5
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 3.4e-44 183.0 131 67.9
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 3.4e-44 183.0 132 69.7
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 3.4e-44 183.0 132 67.4
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 3.4e-44 183.0 131 67.9
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 4.5e-44 182.6 131 67.9
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 4.5e-44 182.6 132 68.2
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 1.0e-43 181.4 131 66.4
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 1.3e-43 181.0 128 68.8
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 1.7e-43 180.6 130 69.2
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 2.2e-43 180.3 132 67.4
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 3.8e-43 179.5 137 65.7
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 4.9e-43 179.1 134 67.2
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 2.5e-42 176.8 132 65.9
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 2.5e-42 176.8 132 68.2
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 9.3e-42 174.9 134 65.7
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.6e-41 174.1 132 65.9
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 4.6e-41 172.6 132 64.4
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 3.3e-39 166.4 131 62.6
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 1.1e-37 161.4 134 59.7
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 2.0e-36 157.1 128 64.8
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 2.6e-36 156.8 132 53.8
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 3.8e-35 152.9 130 58.5
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 3.6e-33 146.4 151 56.3
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 7.9e-33 145.2 110 69.1
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 1.1e-31 141.4 136 59.6
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 5.7e-31 139.0 158 53.8
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 2.8e-30 136.7 132 56.8
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 1.1e-29 134.8 127 56.7
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 3.1e-29 133.3 94 70.2
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 1.2e-28 131.3 98 68.4
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 1.0e-27 128.3 92 67.4
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 1.7e-27 127.5 125 54.4
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 2.2e-27 127.1 94 68.1
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 1.9e-26 124.0 137 54.0
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 3.2e-26 123.2 93 66.7
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 4.2e-26 122.9 136 51.5
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 6.1e-25 119.0 99 62.6
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 1.5e-20 104.4 92 56.5
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 2.6e-20 103.6 95 53.7
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 2.9e-19 100.1 130 40.0
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 2.9e-19 100.1 126 45.2
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 1.2e-17 94.7 117 44.4
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 2.1e-17 94.0 122 41.0
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 2.0e-15 87.4 131 41.2
SGA_v2.0_scaffold211G42127 Striga asiatica HOM05D029151 ORTHO05D406237 2.6e-15 87.0 60 73.3
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 1.3e-14 84.7 64 64.1
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 1.1e-13 81.6 64 60.9
SGA_v2.0_scaffold39G15185 Striga asiatica HOM05D059943 ORTHO05D404256 2.6e-12 77.0 112 49.1
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 1.0e-11 75.1 46 71.7
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 5.0e-11 72.8 39 84.6
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 2.5e-10 70.5 68 52.9
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 1.2e-09 68.2 37 83.8
SGA_v2.0_scaffold316G48426 Striga asiatica HOM05D029151 ORTHO05D401666 6.7e-08 62.4 80 55.0
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 4.8e-06 56.2 31 80.6
SGA_v2.0_scaffold191G40424 Striga asiatica HOM05D029151 ORTHO05D399614 8.2e-06 55.5 35 74.3
SGA_v2.0_scaffold288G47240 Striga asiatica HOM05D006284 ORTHO05D400802 8.2e-06 55.5 76 46.1


User provided reference genes

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