Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold601G53131 Striga asiatica HOM05D002660 ORTHO05D003902 9.8e-112 406.8 197 100.0
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea HOM05D002660 ORTHO05D007974 5.0e-23 112.1 158 42.4
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea HOM05D002660 ORTHO05D007974 5.0e-23 112.1 158 42.4
COL.COLO4_04088 Corchorus olitorius HOM05D002660 ORTHO05D003902 1.4e-20 104.0 151 39.7
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 3.9e-20 102.4 181 35.9
ATR0502G001 Amborella trichopoda HOM05D002660 ORTHO05D003902 8.2e-18 94.7 128 43.8
SGA_v2.0_scaffold245G44628 Striga asiatica HOM05D002660 ORTHO05D003902 3.1e-17 92.8 128 40.6
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 1.5e-16 90.5 182 34.6
Medtr0212s0050 Medicago truncatula HOM05D002660 ORTHO05D003902 5.9e-16 88.6 159 33.3
CAN.G1.6 Capsicum annuum HOM05D002660 ORTHO05D003902 7.7e-16 88.2 175 37.7
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 7.7e-16 88.2 187 35.8
CAN.G1001.30 Capsicum annuum HOM05D002660 ORTHO05D003902 1.7e-15 87.0 181 32.6
Ca_07940_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 2.9e-15 86.3 159 32.7
Ca_08791_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 2.9e-15 86.3 159 32.7
Ca_22174_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 2.9e-15 86.3 159 32.7
Cpa.g.sc263.18 Carica papaya HOM05D002660 ORTHO05D003902 3.8e-15 85.9 158 34.8
Eucgr.J01097 Eucalyptus grandis HOM05D002660 ORTHO05D011807 8.5e-15 84.7 100 41.0
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 2.5e-14 83.2 183 33.9
BcaC05g26896 Brassica carinata HOM05D002660 ORTHO05D003902 9.4e-14 81.3 184 34.2
BcaC08g43707 Brassica carinata HOM05D002660 ORTHO05D003902 9.4e-14 81.3 184 34.2
BNapus_Darmor_BZH_scaffold_234p00270 Brassica napus HOM05D002660 ORTHO05D003902 9.4e-14 81.3 184 34.2
BolSC28t60340H Brassica oleracea HOM05D002660 ORTHO05D003902 9.4e-14 81.3 184 34.2
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea HOM05D002660 ORTHO05D003902 3.6e-13 79.3 181 33.7
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 3.6e-13 79.3 181 33.7
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea HOM05D002660 ORTHO05D003902 3.6e-13 79.3 181 33.7
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea HOM05D002660 ORTHO05D003902 3.6e-13 79.3 181 33.7
Ca_26184_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 3.6e-13 79.3 159 30.2
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 3.6e-13 79.3 183 32.8
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea HOM05D002660 ORTHO05D003902 4.7e-13 79.0 181 33.7
CAN.G1167.16 Capsicum annuum HOM05D002660 ORTHO05D003902 1.0e-12 77.8 143 39.2
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 1.4e-12 77.4 190 31.1
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 1.4e-12 77.4 170 34.7
MBI14_g38259_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D010725 2.3e-12 76.6 164 32.9
RcHm_v2.0_MTg0498601 Rosa chinensis HOM05D002660 ORTHO05D003902 3.9e-12 75.9 96 43.8
Solyc00g500104.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.9e-12 75.9 169 34.3
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.9e-12 75.9 169 34.3
CAN.G1109.11 Capsicum annuum HOM05D002660 ORTHO05D003902 8.8e-12 74.7 143 37.8
LjContig00315g0012920 Lotus japonicus HOM05D002660 ORTHO05D003902 8.8e-12 74.7 96 46.9
SalBow1G8110 Salvia bowleyana HOM05D002660 ORTHO05D003902 3.3e-11 72.8 117 39.3
Sed0020463 Sechium edule HOM05D002660 ORTHO05D003902 5.7e-11 72.0 186 34.4
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea HOM05D002660 ORTHO05D003902 9.7e-11 71.2 132 37.1
Glyma.08G300900 Glycine max HOM05D002660 ORTHO05D003902 9.7e-11 71.2 93 45.2
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 9.7e-11 71.2 93 45.2
MBI05_g05343_MAGBIO Magnolia biondii HOM05D000445 ORTHO05D000314 1.3e-10 70.9 180 32.8
Lalb_Chr00c24g0406851 Lupinus albus HOM05D002660 ORTHO05D003902 4.8e-10 68.9 83 43.4
MBI05_g05346_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 6.3e-10 68.6 71 47.9
Solyc11g063540.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 6.3e-10 68.6 169 32.5
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 8.2e-10 68.2 150 34.0
CAN.G841.4 Capsicum annuum HOM05D002660 ORTHO05D003902 1.1e-09 67.8 141 34.0
Dinv06680 Davidia involucrata HOM05D002660 ORTHO05D011644 1.8e-09 67.0 179 34.6
BraSC177t45771Z Brassica rapa HOM05D002660 ORTHO05D003902 2.4e-09 66.6 168 32.7
BraSC48t46265Z Brassica rapa HOM05D002660 ORTHO05D003902 2.4e-09 66.6 168 32.7
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 7.0e-09 65.1 148 33.1
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 7.0e-09 65.1 148 33.1
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 7.0e-09 65.1 148 33.1
Nitab4.5_0012260g0040 Nicotiana tabacum HOM05D002660 ORTHO05D003902 9.1e-09 64.7 191 29.3
Psat4g178320 Pisum sativum HOM05D002660 ORTHO05D003902 9.1e-09 64.7 44 59.1
Lj2A1234T113 Lonicera japonica HOM05D002660 ORTHO05D003902 2.0e-08 63.5 165 28.5
COL.COLO4_02507 Corchorus olitorius HOM05D002660 ORTHO05D003902 2.6e-08 63.2 44 56.8
Sopen00g006790 Solanum pennellii HOM05D002660 ORTHO05D003902 3.5e-08 62.8 217 26.7
Sopen05g012620 Solanum pennellii HOM05D002660 ORTHO05D003902 3.5e-08 62.8 217 26.7
MBI14_g44092_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 5.9e-08 62.0 86 37.2
Cfa021334 Carpinus fangiana HOM05D002660 ORTHO05D003902 1.0e-07 61.2 71 38.0
Lj5g0008059 Lotus japonicus HOM05D002660 ORTHO05D003902 1.0e-07 61.2 81 46.9
Cpa.g.sc35.17 Carica papaya HOM05D002660 ORTHO05D003902 1.3e-07 60.8 108 33.3
Nitab4.5_0000031g0200 Nicotiana tabacum HOM05D002660 ORTHO05D003902 1.7e-07 60.5 180 27.8
CAN.G140.15 Capsicum annuum HOM05D002660 ORTHO05D003902 2.2e-07 60.1 82 42.7
CAN.G993.8 Capsicum annuum HOM05D002660 ORTHO05D003902 6.5e-07 58.5 137 31.4
SalBow7G1147 Salvia bowleyana HOM05D002660 ORTHO05D009845 6.5e-07 58.5 79 43.0
Glyma.12G175100 Glycine max HOM05D002660 ORTHO05D003902 1.1e-06 57.8 40 62.5
SGA_v2.0_scaffold400G50959 Striga asiatica HOM05D002660 ORTHO05D003902 1.1e-06 57.8 102 35.3
SGA_v2.0_scaffold148G36449 Striga asiatica HOM05D002660 ORTHO05D003902 1.5e-06 57.4 35 80.0
Cfa023009 Carpinus fangiana HOM05D002660 ORTHO05D013121 1.9e-06 57.0 63 47.6
Sed0024408 Sechium edule HOM05D002660 ORTHO05D003902 1.9e-06 57.0 54 53.7
CsaV3_UNG207980 Cucumis sativus L. HOM05D002660 ORTHO05D003902 2.5e-06 56.6 132 34.1
Solyc03g063470.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 3.2e-06 56.2 85 38.8
AT2G07749 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 5.5e-06 55.5 138 32.6
ATMG01110 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 5.5e-06 55.5 138 32.6
CAN.G85.22 Capsicum annuum HOM05D002660 ORTHO05D003902 5.5e-06 55.5 85 40.0
Solyc00g142170.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 5.5e-06 55.5 47 57.4
Solyc00g500255.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 5.5e-06 55.5 47 57.4
PGSC0003DMG400001137 Solanum tuberosum HOM05D002660 ORTHO05D003902 5.5e-06 55.5 47 57.4
Actinidia02791 Actinidia chinensis HOM05D002660 ORTHO05D003902 7.2e-06 55.1 84 39.3
CARHR283370 Cardamine hirsuta HOM05D002660 ORTHO05D003902 7.2e-06 55.1 139 31.7
CSS0017389 Camellia sinensis var. sinensis HOM05D002660 ORTHO05D003902 9.4e-06 54.7 156 30.1


User provided reference genes

Program Settings