Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 6.6e-204 713.8 347 100.0
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 2.9e-127 459.1 347 67.4
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 1.4e-124 450.3 341 66.6
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 2.0e-123 446.4 325 68.0
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 1.7e-111 406.8 341 59.8
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 2.2e-111 406.4 344 58.4
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 5.0e-111 405.2 346 60.7
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 6.5e-111 404.8 346 59.8
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 3.2e-110 402.5 342 59.4
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 7.2e-110 401.4 344 59.0
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 7.2e-110 401.4 346 57.2
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 7.2e-110 401.4 343 57.7
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 1.2e-109 400.6 344 58.4
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 3.6e-109 399.1 344 58.1
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 3.6e-109 399.1 343 57.4
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 3.6e-109 399.1 354 57.1
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 4.7e-109 398.7 337 59.6
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 8.0e-109 397.9 337 59.6
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 1.0e-108 397.5 345 58.0
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 3.0e-108 396.0 354 57.6
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 6.8e-108 394.8 347 57.6
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.5e-107 393.7 348 56.9
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 3.4e-107 392.5 348 56.6
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 1.3e-106 390.6 348 56.6
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 2.2e-106 389.8 341 58.1
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 2.8e-106 389.4 339 58.1
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 2.8e-106 389.4 341 57.8
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 3.7e-106 389.0 345 57.4
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 4.8e-106 388.7 344 58.1
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 6.3e-106 388.3 352 58.2
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 3.1e-105 386.0 345 55.7
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 4.1e-105 385.6 340 54.7
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 4.1e-105 385.6 340 54.7
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 5.4e-105 385.2 341 57.5
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 5.9e-104 381.7 344 56.4
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 1.3e-103 380.6 345 56.2
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 1.3e-103 380.6 342 58.2
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 1.7e-103 380.2 340 54.7
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 1.7e-103 380.2 343 56.9
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 3.8e-103 379.0 342 54.1
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.8e-103 379.0 348 56.0
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 6.6e-103 378.3 329 58.1
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 6.6e-103 378.3 329 58.1
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 8.6e-103 377.9 334 55.7
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 1.1e-102 377.5 357 54.3
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 7.2e-102 374.8 342 54.1
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 7.2e-102 374.8 342 54.1
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 9.5e-102 374.4 345 54.8
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 4.7e-101 372.1 364 51.1
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 4.7e-101 372.1 345 55.1
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 6.1e-101 371.7 345 53.0
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 8.0e-101 371.3 344 53.8
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 8.0e-101 371.3 347 54.5
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 1.0e-100 370.9 343 55.4
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 1.8e-100 370.2 344 54.7
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 1.8e-100 370.2 345 53.0
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 2.3e-100 369.8 340 55.0
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 3.0e-100 369.4 318 59.4
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 4.0e-100 369.0 342 55.3
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 4.0e-100 369.0 345 56.5
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 6.8e-100 368.2 343 54.2
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 8.9e-100 367.9 366 53.0
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 2.0e-99 366.7 362 50.3
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 2.0e-99 366.7 344 54.4
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 2.0e-99 366.7 341 56.0
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 2.6e-99 366.3 342 52.6
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 4.4e-99 365.5 346 53.8
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 7.5e-99 364.8 341 55.1
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 2.2e-98 363.2 376 51.3
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 2.2e-98 363.2 348 54.3
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 2.4e-97 359.8 317 56.8
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 7.0e-97 358.2 335 53.4
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 7.0e-97 358.2 337 55.2
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 4.5e-96 355.5 323 55.1
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 1.3e-95 354.0 343 52.8
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 6.6e-95 351.7 323 54.8
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.5e-94 350.5 361 51.8
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 2.8e-93 346.3 342 55.8
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 8.9e-92 341.3 324 54.9
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.5e-91 340.5 346 52.9
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 4.4e-91 339.0 333 53.2
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 4.9e-90 335.5 338 49.7
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 4.9e-90 335.5 311 57.2
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 9.2e-89 331.3 343 51.3
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 3.0e-87 326.2 256 63.3
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 3.9e-87 325.9 253 63.6
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 3.3e-86 322.8 269 61.0
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 5.6e-86 322.0 339 50.1
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 4.7e-85 318.9 324 50.3
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 8.0e-85 318.2 337 50.1
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 3.1e-84 316.2 324 50.3
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 4.0e-84 315.8 280 56.1
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 1.6e-77 293.9 298 53.4
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 3.1e-76 289.7 310 51.0
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 2.7e-72 276.6 342 45.9
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 2.3e-71 273.5 349 43.8
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 2.3e-71 273.5 264 54.5
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 2.1e-69 266.9 218 60.1
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.4e-68 264.2 263 52.9
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 2.6e-67 260.0 261 51.7
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 6.0e-64 248.8 353 38.2
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 7.8e-64 248.4 238 51.7
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 2.8e-61 240.0 307 45.6
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.7e-58 230.7 183 57.9
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 3.0e-55 219.9 191 58.6
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 1.5e-51 207.6 213 51.6
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 8.7e-47 191.8 241 45.2
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 2.1e-40 170.6 128 58.6
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 7.9e-40 168.7 301 37.9
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 1.3e-37 161.4 144 52.8
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 2.4e-36 157.1 125 57.6
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 3.9e-31 139.8 103 64.1
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 6.9e-28 129.0 180 40.0
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 2.7e-16 90.5 104 48.1
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 2.4e-12 77.4 71 52.1
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 6.1e-08 62.8 83 44.6


User provided reference genes

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