Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 0.0e+00 1114.4 551 100.0
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.4e-187 660.2 384 83.1
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 7.0e-184 647.9 378 82.5
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 2.7e-183 646.0 384 81.5
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 3.9e-182 642.1 384 82.3
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 3.3e-181 639.0 381 80.6
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 4.3e-181 638.6 367 84.5
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 3.1e-179 632.5 371 82.5
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 5.2e-179 631.7 383 79.6
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 4.9e-177 625.2 368 82.6
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 6.4e-177 624.8 355 82.8
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 6.4e-177 624.8 348 85.9
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 2.4e-176 622.9 393 77.9
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 7.8e-175 617.8 348 84.5
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 1.3e-174 617.1 380 77.4
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 6.6e-174 614.8 366 80.6
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 1.9e-173 613.2 366 79.5
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 2.5e-173 612.8 355 81.1
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 5.6e-173 611.7 355 81.4
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 5.6e-173 611.7 348 83.3
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 7.3e-173 611.3 346 84.1
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 2.1e-172 609.8 355 82.3
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 6.2e-172 608.2 380 78.4
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 6.2e-172 608.2 355 81.7
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 1.1e-171 607.4 354 81.1
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 1.4e-171 607.1 366 78.4
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 1.4e-171 607.1 347 82.4
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 2.3e-171 606.3 355 80.8
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 3.1e-171 605.9 367 78.7
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 6.8e-171 604.7 361 81.7
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 1.5e-170 603.6 367 80.1
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.5e-170 603.6 355 81.1
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 2.0e-170 603.2 355 80.6
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 2.6e-170 602.8 369 78.0
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 4.4e-170 602.1 347 83.6
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 4.4e-170 602.1 389 76.1
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 5.8e-170 601.7 368 78.8
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 7.6e-170 601.3 346 81.5
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 9.9e-170 600.9 346 81.5
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 9.9e-170 600.9 347 81.6
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 2.2e-169 599.7 353 80.7
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 2.2e-169 599.7 387 76.0
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 3.8e-169 599.0 366 79.0
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 6.4e-169 598.2 355 80.6
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 8.4e-169 597.8 346 81.2
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 1.1e-168 597.4 378 75.7
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 1.4e-168 597.0 376 77.9
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 1.4e-168 597.0 344 83.4
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 2.4e-168 596.3 371 78.2
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 4.1e-168 595.5 347 82.7
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 1.6e-167 593.6 345 81.2
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 2.1e-167 593.2 367 77.7
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 2.7e-167 592.8 346 81.8
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 4.6e-167 592.0 348 80.7
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 4.6e-167 592.0 345 81.2
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 4.6e-167 592.0 424 69.8
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 1.0e-166 590.9 365 76.2
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 1.0e-166 590.9 366 77.3
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 1.0e-166 590.9 363 79.9
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 3.0e-166 589.3 348 80.2
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 6.6e-166 588.2 346 82.1
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 1.1e-165 587.4 347 80.7
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.1e-165 587.4 372 78.0
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 1.5e-165 587.0 355 78.3
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 1.9e-165 586.6 346 81.2
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.9e-165 586.6 354 78.0
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 2.5e-165 586.3 371 78.2
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 3.3e-165 585.9 372 78.0
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 5.6e-165 585.1 346 80.9
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 5.6e-165 585.1 360 78.6
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 1.6e-164 583.6 366 77.0
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.1e-164 583.2 346 81.5
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 2.8e-164 582.8 348 79.0
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 6.2e-164 581.6 386 71.8
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 8.1e-164 581.3 361 77.8
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 1.1e-163 580.9 348 80.7
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 1.4e-163 580.5 369 77.0
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 1.8e-163 580.1 347 80.7
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.4e-163 579.7 372 76.9
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 2.4e-163 579.7 370 76.8
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 3.1e-163 579.3 349 79.9
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 3.1e-163 579.3 424 68.9
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 8.9e-163 577.8 353 76.2
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 2.6e-162 576.2 337 81.3
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 4.4e-162 575.5 327 82.9
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 9.9e-162 574.3 341 79.8
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 9.9e-162 574.3 346 78.9
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 1.7e-161 573.5 371 73.0
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 1.7e-161 573.5 337 81.6
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 1.7e-161 573.5 351 78.1
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 3.8e-161 572.4 349 77.4
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 1.1e-160 570.9 341 79.2
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 1.2e-159 567.4 341 78.3
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 7.8e-159 564.7 319 82.8
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 8.7e-158 561.2 351 76.6
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 5.3e-155 552.0 347 76.4
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 3.3e-149 532.7 323 79.9
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 2.1e-148 530.0 323 79.3
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 1.4e-144 517.3 360 72.8
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 6.7e-142 508.4 335 71.9
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 1.1e-141 507.7 330 73.0
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 2.5e-141 506.5 380 66.1
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 5.6e-141 505.4 331 71.6
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 4.5e-138 495.7 332 72.6
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 9.3e-136 488.0 371 63.9
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 3.4e-130 469.5 354 66.9
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 1.0e-129 468.0 366 65.3
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 3.3e-125 453.0 347 67.4
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 8.5e-121 438.3 329 63.2
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 1.3e-113 414.5 376 56.4
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 1.1e-112 411.4 343 58.0
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 3.6e-111 406.4 254 76.0
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 2.4e-107 393.7 252 77.0
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 9.1e-107 391.7 232 78.4
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 3.5e-106 389.8 239 75.7
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 2.9e-105 386.7 246 74.4
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.0e-102 378.3 327 58.4
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 1.5e-93 347.8 369 47.7
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 7.5e-69 265.8 287 46.7
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 1.3e-65 255.0 165 73.3
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 3.1e-62 243.8 174 69.5
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 1.3e-60 238.4 166 67.5
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 3.1e-46 190.7 155 63.9
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 6.9e-46 189.5 131 71.8
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 4.5e-13 80.5 89 50.6
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 4.5e-13 80.5 89 50.6
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 2.9e-12 77.8 59 67.8
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 1.8e-09 68.6 35 82.9


User provided reference genes

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