Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G03086 Striga asiatica HOM05D007511 ORTHO05D003753 8.7e-60 233.4 116 100.0
Migut.B01440 Erythranthe guttata HOM05D007511 ORTHO05D003753 4.8e-34 147.9 118 66.9
Oeu024951.1 Olea europaea HOM05D007511 ORTHO05D003753 7.4e-27 124.0 135 51.1
Oeu032775.1 Olea europaea HOM05D007511 ORTHO05D003753 9.7e-27 123.6 137 52.6
Hma1.2p1_0915F.1_g236420 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 3.6e-21 105.1 86 64.0
SGA_v2.0_scaffold95G28750 Striga asiatica HOM05D007511 ORTHO05D003753 8.0e-21 104.0 123 47.2
Peaxi162Scf01343g00114 Petunia axillaris HOM05D007511 ORTHO05D003753 1.5e-19 99.8 103 46.6
PGSC0003DMG400043768 Solanum tuberosum HOM05D007511 ORTHO05D003753 3.4e-19 98.6 137 42.3
HanXRQChr04g0119711 Helianthus annuus HOM05D007511 ORTHO05D003753 4.4e-19 98.2 86 52.3
SalBow4G0080 Salvia bowleyana HOM05D007511 ORTHO05D003753 1.3e-18 96.7 103 49.5
SalBow4G2364 Salvia bowleyana HOM05D007511 ORTHO05D003753 1.3e-18 96.7 103 49.5
vmacro13587 Vaccinium macrocarpon HOM05D007511 ORTHO05D003753 1.3e-18 96.7 102 47.1
Nitab4.5_0004800g0110 Nicotiana tabacum HOM05D000001 ORTHO05D011953 3.7e-18 95.1 93 53.8
Hma1.2p1_0353F.1_g133330 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 4.8e-18 94.7 114 49.1
Sopen01g032800 Solanum pennellii HOM05D007511 ORTHO05D003753 6.3e-18 94.4 137 40.9
Rhsim07G0046200 Rhododendron simsii HOM05D007511 ORTHO05D003753 1.4e-17 93.2 107 43.9
Lsat_1_v5_gn_7_35641 Lactuca sativa HOM05D007511 ORTHO05D003753 7.0e-17 90.9 92 43.5
Migut.N01683 Erythranthe guttata HOM05D007511 ORTHO05D003753 9.1e-17 90.5 134 44.0
Sopen10g009620 Solanum pennellii HOM05D007511 ORTHO05D025904 1.2e-16 90.1 87 50.6
Solyc10g024480.1 Solanum lycopersicum HOM05D007511 ORTHO05D003753 4.5e-16 88.2 87 49.4
Gohir.A11G221900 Gossypium hirsutum HOM05D007511 ORTHO05D003753 1.7e-15 86.3 107 40.2
Duzib128G1432 Durio zibethinus HOM05D007511 ORTHO05D003753 3.8e-15 85.1 113 40.7
Gohir.D11G235550 Gossypium hirsutum HOM05D007511 ORTHO05D003753 8.5e-15 84.0 107 39.3
Duzib177G0499 Durio zibethinus HOM05D007511 ORTHO05D003753 2.5e-14 82.4 113 38.9
CSS0038510 Camellia sinensis var. sinensis HOM05D007511 ORTHO05D003753 9.4e-14 80.5 105 41.0
Gorai.007G248300 Gossypium raimondii HOM05D007511 ORTHO05D003753 1.2e-13 80.1 107 38.3
PSO063G5504 Papaver somniferum HOM05D007511 ORTHO05D003753 1.4e-12 76.6 68 51.5
Rhsim01G0134200 Rhododendron simsii HOM05D007511 ORTHO05D003753 1.4e-12 76.6 95 46.3
Manes.08G158000 Manihot esculenta HOM05D007511 ORTHO05D003753 4.0e-12 75.1 67 49.3
Rhsim01G0134700 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.8e-12 73.9 77 49.4
Sabra19G0054300 Salix brachista HOM05D007511 ORTHO05D003753 8.8e-12 73.9 109 33.9
PSO782G3115 Papaver somniferum HOM05D007511 ORTHO05D003753 1.2e-11 73.6 68 50.0
FAN01G1810 Fragaria x ananassa HOM05D007511 ORTHO05D003753 2.0e-11 72.8 79 43.0
FvH4_7g07110 Fragaria vesca HOM05D007511 ORTHO05D003753 2.6e-11 72.4 79 43.0
FAN03G1709 Fragaria x ananassa HOM05D007511 ORTHO05D003753 2.6e-11 72.4 117 36.8
FAN06G3938 Fragaria x ananassa HOM05D007511 ORTHO05D003753 2.6e-11 72.4 79 43.0
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 5.7e-11 71.2 115 36.5
TWI60G1247 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 5.7e-11 71.2 114 34.2
Atru.chr2.1724 Acer truncatum HOM05D007511 ORTHO05D003753 9.8e-11 70.5 65 46.2
Nn1g09148 Nelumbo nucifera HOM05D007511 ORTHO05D003753 1.7e-10 69.7 97 39.2
PGR004G1271 Punica granatum HOM05D007511 ORTHO05D003753 1.7e-10 69.7 69 47.8
Nn1g08946 Nelumbo nucifera HOM05D001418 ORTHO05D003753 2.2e-10 69.3 62 50.0
Sed0019168 Sechium edule HOM05D007511 ORTHO05D003753 2.2e-10 69.3 67 46.3
TWI34G0987 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 2.2e-10 69.3 65 49.2
RcHm_v2.0_Chr1g0337051 Rosa chinensis HOM05D007511 ORTHO05D003753 3.7e-10 68.6 67 44.8
MD02G1239600 Malus domestica HOM05D007511 ORTHO05D003753 6.3e-10 67.8 105 38.1
Potri.019G043701 Populus trichocarpa HOM05D007511 ORTHO05D003753 6.3e-10 67.8 67 41.8
Prupe.2G098000 Prunus persica HOM05D007511 ORTHO05D003753 8.3e-10 67.4 108 36.1
Cpa.g.sc73.86 Carica papaya HOM05D007511 ORTHO05D003753 1.4e-09 66.6 106 34.0
MD07G1077000 Malus domestica HOM05D007511 ORTHO05D003753 1.4e-09 66.6 109 35.8
CiPaw.02G046500 Carya illinoinensis HOM05D007511 ORTHO05D003753 1.8e-09 66.2 110 36.4
Thecc.05G230200 Theobroma cacao HOM05D007511 ORTHO05D003753 4.1e-09 65.1 93 39.8
Ciclev10033674m.g Citrus clementina HOM05D007511 ORTHO05D003753 5.4e-09 64.7 105 35.2
CsaV3_2G011030 Cucumis sativus L. HOM05D007511 ORTHO05D003753 9.1e-09 63.9 67 41.8
TAR629G3237 Trochodendron aralioides HOM05D007511 ORTHO05D003753 9.1e-09 63.9 102 39.2
MBI06_g35216_MAGBIO Magnolia biondii HOM05D007511 ORTHO05D003753 1.6e-08 63.2 106 31.1
CANSAT35G2046 Cannabis sativa HOM05D007511 ORTHO05D003753 2.0e-08 62.8 64 40.6
Phvul.010G032800 Phaseolus vulgaris HOM05D007511 ORTHO05D003753 2.0e-08 62.8 109 33.9
CAN.G992.2 Capsicum annuum HOM05D007511 ORTHO05D003753 4.5e-08 61.6 50 56.0
Lalb_Chr07g0194541 Lupinus albus HOM05D007511 ORTHO05D003753 7.7e-08 60.8 65 40.0
Ca_23172_v3 Cicer arietinum L. HOM05D007511 ORTHO05D003753 1.7e-07 59.7 110 32.7
CDE02G0326 Ceratophyllum demersum HOM05D007511 ORTHO05D003753 2.9e-07 58.9 67 41.8
Cfa000931 Carpinus fangiana HOM05D007511 ORTHO05D003753 8.6e-07 57.4 69 42.0
Nn3g19224 Nelumbo nucifera HOM05D007511 ORTHO05D003753 8.6e-07 57.4 113 33.6
Eucgr.D00980 Eucalyptus grandis HOM05D007511 ORTHO05D003753 1.9e-06 56.2 62 45.2
HPP92_004456 Vanilla planifolia HOM05D001418 ORTHO05D003753 1.9e-06 56.2 61 42.6
HPP92_025164 Vanilla planifolia HOM05D001418 ORTHO05D003753 1.9e-06 56.2 63 46.0
CDE08G1405 Ceratophyllum demersum HOM05D007511 ORTHO05D003753 2.5e-06 55.8 106 34.9
TAR381G0240 Trochodendron aralioides HOM05D001418 ORTHO05D004504 2.5e-06 55.8 66 42.4
Sc16g0009500 Simmondsia chinensis HOM05D001418 ORTHO05D003753 3.3e-06 55.5 71 38.0
TAR625G0656 Trochodendron aralioides HOM05D001418 ORTHO05D003753 3.3e-06 55.5 63 39.7
HPP92_025177 Vanilla planifolia HOM05D001418 ORTHO05D003753 4.2e-06 55.1 109 37.6
QL10p041864 Quercus lobata HOM05D001418 ORTHO05D003753 5.5e-06 54.7 102 30.4
Glyma.16G082300 Glycine max HOM05D007511 ORTHO05D003753 9.5e-06 53.9 74 35.1
QL10p041674 Quercus lobata HOM05D001418 ORTHO05D003753 9.5e-06 53.9 99 30.3


User provided reference genes

Program Settings