Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G03055 Striga asiatica HOM05D008585 ORTHO05D000397 5.6e-95 350.9 172 100.0
SGA_v2.0_scaffold3G01660 Striga asiatica HOM05D008585 ORTHO05D000397 4.9e-67 258.1 141 86.5
SGA_v2.0_scaffold491G52433 Striga asiatica HOM05D008585 ORTHO05D000397 5.6e-63 244.6 141 83.0
SGA_v2.0_scaffold9G04779 Striga asiatica HOM05D008585 ORTHO05D000397 1.6e-62 243.0 143 81.8
SGA_v2.0_scaffold148G36401 Striga asiatica HOM05D008585 ORTHO05D000397 2.1e-62 242.7 143 83.2
SGA_v2.0_scaffold448G51779 Striga asiatica HOM05D008585 ORTHO05D000397 4.7e-62 241.5 143 81.1
SGA_v2.0_scaffold16G07582 Striga asiatica HOM05D008585 ORTHO05D000397 6.2e-62 241.1 143 81.1
SGA_v2.0_scaffold18G08386 Striga asiatica HOM05D008585 ORTHO05D000397 2.4e-58 229.2 134 81.3
SGA_v2.0_scaffold35G14138 Striga asiatica HOM05D008585 ORTHO05D000397 9.3e-58 227.3 126 86.5
SGA_v2.0_scaffold61G21229 Striga asiatica HOM05D008585 ORTHO05D000397 4.2e-50 201.8 113 84.1
SGA_v2.0_scaffold152G36821 Striga asiatica HOM05D008585 ORTHO05D000397 1.5e-47 193.4 121 76.0
SGA_v2.0_scaffold137G35092 Striga asiatica HOM05D008585 ORTHO05D000397 6.4e-43 177.9 138 60.1
SGA_v2.0_scaffold63G21779 Striga asiatica HOM05D008585 ORTHO05D000397 8.4e-43 177.6 141 61.7
SGA_v2.0_scaffold164G38150 Striga asiatica HOM05D008585 ORTHO05D000397 1.6e-41 173.3 141 58.9
SGA_v2.0_scaffold41G15715 Striga asiatica HOM05D008585 ORTHO05D000397 4.6e-41 171.8 138 60.1
SGA_v2.0_scaffold304G47894 Striga asiatica HOM05D008585 ORTHO05D000397 1.3e-40 170.2 138 57.2
SGA_v2.0_scaffold12G06039 Striga asiatica HOM05D008585 ORTHO05D000397 3.9e-40 168.7 138 58.0
SGA_v2.0_scaffold148G36424 Striga asiatica HOM05D008585 ORTHO05D000397 1.9e-39 166.4 138 57.2
SGA_v2.0_scaffold162G37930 Striga asiatica HOM05D008585 ORTHO05D000397 6.2e-38 161.4 141 60.3
SGA_v2.0_scaffold449G51795 Striga asiatica HOM05D008585 ORTHO05D000397 3.1e-37 159.1 126 60.3
SGA_v2.0_scaffold91G28036 Striga asiatica HOM05D008585 ORTHO05D000397 2.1e-33 146.4 140 53.6
SGA_v2.0_scaffold5241G54611 Striga asiatica HOM05D008585 ORTHO05D000397 4.6e-25 118.6 65 86.2
SGA_v2.0_scaffold65G22152 Striga asiatica HOM05D008585 ORTHO05D000397 6.7e-24 114.8 138 41.3
SGA_v2.0_scaffold91G28089 Striga asiatica HOM05D008585 ORTHO05D000397 6.7e-24 114.8 138 41.3
SGA_v2.0_scaffold21G09322 Striga asiatica HOM05D008585 ORTHO05D000397 1.0e-19 100.9 78 55.1
Oeu041493.2 Olea europaea HOM05D008585 ORTHO05D000397 3.0e-16 89.4 128 39.8
Oeu064355.1 Olea europaea HOM05D008585 ORTHO05D000397 3.0e-16 89.4 128 39.8
Ciclev10003531m.g Citrus clementina HOM05D002262 ORTHO05D000482 1.3e-14 84.0 125 36.8
Nitab4.5_0000924g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.2e-14 81.3 139 28.1
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.2e-14 81.3 120 31.7
Oeu029820.1 Olea europaea HOM05D008585 ORTHO05D000397 1.1e-13 80.9 122 39.3
Oeu058706.1 Olea europaea HOM05D008585 ORTHO05D000397 1.1e-13 80.9 122 39.3
Nitab4.5_0000477g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.1e-13 77.8 138 27.5
Nitab4.5_0013676g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.5e-12 75.5 122 27.9
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.9e-12 75.1 138 25.4
Nitab4.5_0011961g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.0e-11 74.3 92 34.8
Nitab4.5_0001896g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.3e-11 73.9 153 26.1
Nitab4.5_0003911g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.3e-11 73.9 120 28.3
Nitab4.5_0000036g0380 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.7e-11 73.6 120 29.2
Nitab4.5_0002951g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.5e-11 71.6 120 28.3
Oeu000023.2 Olea europaea HOM05D002262 ORTHO05D000482 8.5e-11 71.2 85 35.3
Nitab4.5_0007137g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.1e-10 70.9 120 28.3
Nitab4.5_0009218g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.4e-10 70.5 118 29.7
Oeu046913.1 Olea europaea HOM05D000700 ORTHO05D000397 1.4e-10 70.5 118 33.1
Nitab4.5_0001927g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.9e-10 70.1 120 27.5
Nitab4.5_0001308g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.2e-10 68.9 120 30.0
Nitab4.5_0007360g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.5e-10 68.6 152 23.7
HanXRQChr04g0099521 Helianthus annuus HOM05D010915 ORTHO05D010404 8.0e-09 64.7 162 29.0
CANSAT54G0758 Cannabis sativa HOM05D002262 ORTHO05D000482 1.0e-08 64.3 121 27.3
Oeu021073.1 Olea europaea HOM05D006164 ORTHO05D001269 1.4e-08 63.9 100 31.0
Oeu039421.1 Olea europaea HOM05D006164 ORTHO05D001269 1.8e-08 63.5 100 31.0
Oeu046589.1 Olea europaea HOM05D000700 ORTHO05D000397 1.8e-08 63.5 109 33.9
Oeu020909.1 Olea europaea HOM05D000700 ORTHO05D000397 2.3e-08 63.2 111 33.3
HanXRQChr04g0099511 Helianthus annuus HOM05D010915 ORTHO05D010404 3.9e-08 62.4 128 28.9
Nitab4.5_0008423g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.9e-08 62.4 126 26.2
Nitab4.5_0003022g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 5.2e-08 62.0 102 31.4
Nitab4.5_0003111g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.2e-08 62.0 125 24.0
Nitab4.5_0004308g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 5.2e-08 62.0 126 26.2
Nitab4.5_0012202g0030 Nicotiana tabacum HOM05D005063 ORTHO05D010498 5.2e-08 62.0 101 30.7
Sopen06g002980 Solanum pennellii HOM05D005063 ORTHO05D000482 6.7e-08 61.6 122 27.0
Oeu028038.1 Olea europaea HOM05D000700 ORTHO05D000397 8.8e-08 61.2 88 33.0
Nitab4.5_0002315g0040 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.1e-07 60.8 126 26.2
Oeu062339.1 Olea europaea HOM05D000700 ORTHO05D000397 1.1e-07 60.8 126 27.0
SGA_v2.0_scaffold281G46892 Striga asiatica HOM05D011754 ORTHO05D014689 1.1e-07 60.8 43 55.8
CANSAT11G2391 Cannabis sativa HOM05D009344 ORTHO05D001269 1.5e-07 60.5 78 43.6
CANSAT21G1240 Cannabis sativa HOM05D020893 ORTHO05D000482 1.5e-07 60.5 109 26.6
CANSAT54G2644 Cannabis sativa HOM05D020893 ORTHO05D000482 1.5e-07 60.5 109 26.6
Nitab4.5_0004436g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.5e-07 60.5 127 26.0
Oeu032340.1 Olea europaea HOM05D000700 ORTHO05D000397 1.5e-07 60.5 126 27.8
SGA_v2.0_scaffold152G36827 Striga asiatica HOM05D008585 ORTHO05D000397 1.5e-07 60.5 76 38.2
CANSAT54G1962 Cannabis sativa HOM05D009344 ORTHO05D001269 2.0e-07 60.1 66 47.0
Nitab4.5_0001047g0110 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.6e-07 59.7 79 30.4
Oeu053568.1 Olea europaea HOM05D000700 ORTHO05D000397 2.6e-07 59.7 126 27.0
CANSAT54G1637 Cannabis sativa HOM05D009344 ORTHO05D001269 3.3e-07 59.3 78 43.6
CANSAT35G1168 Cannabis sativa HOM05D002262 ORTHO05D000482 4.4e-07 58.9 86 33.7
CANSAT54G0857 Cannabis sativa HOM05D002262 ORTHO05D000482 4.4e-07 58.9 86 33.7
CANSAT54G1872 Cannabis sativa HOM05D002262 ORTHO05D000482 4.4e-07 58.9 86 33.7
Nitab4.5_0000471g0160 Nicotiana tabacum HOM05D005877 ORTHO05D000482 4.4e-07 58.9 125 24.0
Nitab4.5_0000008g0750 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.7e-07 58.5 85 32.9
Nitab4.5_0000227g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.7e-07 58.5 75 32.0
Oeu041703.1 Olea europaea HOM05D000700 ORTHO05D000397 5.7e-07 58.5 87 33.3
BolC6t38698H Brassica oleracea HOM05D000977 ORTHO05D001094 7.4e-07 58.2 130 26.2
Oeu060715.1 Olea europaea HOM05D000700 ORTHO05D000397 7.4e-07 58.2 126 27.0
Nitab4.5_0005249g0080 Nicotiana tabacum HOM05D005877 ORTHO05D011670 9.7e-07 57.8 99 26.3
Oeu031011.1 Olea europaea HOM05D000700 ORTHO05D000397 9.7e-07 57.8 126 27.0
CANSAT56G2811 Cannabis sativa HOM05D002262 ORTHO05D000482 1.3e-06 57.4 86 32.6
Nitab4.5_0000326g0300 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.3e-06 57.4 103 29.1
Oeu005447.1 Olea europaea HOM05D006164 ORTHO05D001269 1.3e-06 57.4 82 34.1
CANSAT25G1815 Cannabis sativa HOM05D009344 ORTHO05D001269 1.7e-06 57.0 66 43.9
Nitab4.5_0006716g0010 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.7e-06 57.0 126 24.6
Nitab4.5_0022061g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.8e-06 56.2 126 24.6
Oeu038952.1 Olea europaea HOM05D000700 ORTHO05D000397 2.8e-06 56.2 83 34.9
Oeu045767.1 Olea europaea HOM05D006164 ORTHO05D001269 3.7e-06 55.8 87 29.9
CANSAT01G0062 Cannabis sativa HOM05D008058 ORTHO05D001269 4.8e-06 55.5 85 30.6
CANSAT01G1142 Cannabis sativa HOM05D009472 ORTHO05D000482 4.8e-06 55.5 113 27.4
CANSAT56G1481 Cannabis sativa HOM05D009472 ORTHO05D000482 4.8e-06 55.5 113 27.4
ECA247G0511 Erigeron canadensis HOM05D010915 ORTHO05D010404 4.8e-06 55.5 106 30.2
Nitab4.5_0007629g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 4.8e-06 55.5 114 25.4
Oeu037089.1 Olea europaea HOM05D002262 ORTHO05D000708 4.8e-06 55.5 104 26.9
CANSAT80G2531 Cannabis sativa HOM05D009472 ORTHO05D000482 6.3e-06 55.1 121 28.1
Lsat_1_v5_gn_4_99201 Lactuca sativa HOM05D009439 ORTHO05D010827 6.3e-06 55.1 138 30.4
Nitab4.5_0006980g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.3e-06 55.1 114 28.9
Nitab4.5_0008354g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 6.3e-06 55.1 126 25.4
Nitab4.5_0008587g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 8.2e-06 54.7 120 27.5


User provided reference genes

Program Settings