Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 0.0e+00 1231.5 645 100.0
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 2.9e-253 878.6 657 71.2
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 7.8e-251 870.5 658 71.1
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 2.1e-240 835.9 657 68.3
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 9.3e-228 793.9 657 64.5
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 1.5e-225 786.6 670 63.6
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 2.8e-224 782.3 658 64.4
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 5.8e-222 774.6 660 64.1
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 6.5e-221 771.2 672 62.5
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 1.4e-220 770.0 661 63.7
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 3.2e-220 768.8 662 62.5
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 5.5e-220 768.1 658 63.1
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 9.3e-220 767.3 671 63.0
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 1.6e-219 766.5 672 62.2
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 2.1e-219 766.1 659 63.7
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 2.7e-219 765.8 660 62.1
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 3.5e-219 765.4 659 63.7
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 3.5e-219 765.4 672 62.2
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 1.0e-218 763.8 658 63.1
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 8.2e-216 754.2 672 62.1
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 1.4e-215 753.4 656 62.0
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 9.0e-215 750.7 671 61.0
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.2e-214 750.4 661 61.1
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.0e-214 749.6 660 62.3
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 4.5e-214 748.4 673 61.7
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 2.2e-213 746.1 662 61.5
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.9e-213 745.7 659 61.0
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 3.8e-213 745.3 667 61.9
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 3.2e-212 742.3 663 62.4
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 4.2e-212 741.9 680 61.0
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 7.2e-212 741.1 669 61.3
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 6.1e-211 738.0 648 63.0
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 1.0e-210 737.3 662 61.5
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 6.7e-210 734.6 660 61.7
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 1.9e-209 733.0 658 60.9
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 4.3e-209 731.9 665 60.9
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 2.2e-208 729.6 681 59.9
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 1.1e-207 727.2 667 61.6
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 9.1e-207 724.2 651 61.0
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 9.1e-207 724.2 653 61.1
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.5e-206 723.4 679 60.5
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 5.9e-206 721.5 659 60.7
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 5.9e-206 721.5 664 59.8
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 7.7e-206 721.1 647 60.7
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 1.7e-205 719.9 652 60.7
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 1.7e-205 719.9 662 60.6
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 5.0e-205 718.4 671 60.4
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 8.5e-205 717.6 659 60.1
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 8.5e-205 717.6 680 59.6
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 4.2e-204 715.3 658 59.6
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 6.1e-203 711.4 665 58.9
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 6.1e-203 711.4 665 58.9
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 3.0e-202 709.1 670 60.1
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 5.1e-202 708.4 648 59.9
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 6.7e-202 708.0 657 59.8
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 4.4e-201 705.3 670 60.3
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 9.7e-201 704.1 661 58.7
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 2.8e-200 702.6 677 58.6
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 3.7e-200 702.2 663 60.3
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 6.3e-200 701.4 657 57.5
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 1.5e-198 696.8 664 59.0
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 8.5e-197 691.0 662 58.2
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 4.7e-195 685.3 665 58.3
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 7.9e-195 684.5 638 58.8
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 6.7e-194 681.4 661 58.7
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 2.0e-193 679.9 664 58.0
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 7.4e-193 677.9 617 60.8
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 2.2e-192 676.4 654 58.0
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 4.8e-192 675.2 672 57.3
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 3.1e-191 672.5 666 57.7
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 7.7e-190 667.9 658 57.9
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 2.9e-189 666.0 661 57.9
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 2.9e-189 666.0 653 56.5
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 4.2e-188 662.1 651 58.2
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 7.2e-188 661.4 611 60.1
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 1.6e-187 660.2 660 57.7
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 2.1e-187 659.8 650 57.7
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 2.0e-185 653.3 659 57.1
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.7e-184 650.2 654 56.7
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 3.7e-184 649.0 639 57.0
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 2.4e-183 646.4 651 54.4
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 1.6e-182 643.7 588 60.9
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 4.5e-182 642.1 655 55.1
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 1.7e-181 640.2 668 54.3
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 8.0e-179 631.3 665 56.1
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 1.0e-178 630.9 680 53.2
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 3.0e-178 629.4 674 53.0
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 3.0e-178 629.4 651 56.1
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 1.7e-176 623.6 675 53.2
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 1.1e-175 620.9 671 53.2
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 3.1e-175 619.4 676 53.6
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 3.5e-174 615.9 675 53.2
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 1.3e-173 614.0 678 52.4
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 1.7e-173 613.6 671 52.6
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 2.5e-172 609.8 674 51.6
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 1.0e-170 604.4 661 53.6
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 2.0e-169 600.1 671 50.5
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 3.7e-168 595.9 469 65.7
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 6.3e-168 595.1 680 51.2
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 6.2e-131 472.2 707 42.1
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 1.5e-129 467.6 683 41.1
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 3.4e-129 466.5 620 46.6
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 4.4e-129 466.1 370 68.6
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 1.1e-127 461.5 671 42.0
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 4.2e-127 459.5 557 49.0
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 1.1e-122 444.9 662 44.1
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 1.3e-115 421.4 309 72.8
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 2.2e-112 410.6 651 39.0
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 1.3e-101 374.8 316 64.2
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 3.0e-101 373.6 362 57.5
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 3.1e-98 363.6 363 57.0
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 7.2e-79 299.3 600 33.8
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 5.0e-72 276.6 246 61.0
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 4.0e-53 213.8 247 49.0
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 1.1e-50 205.7 328 40.5
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 7.8e-49 199.5 265 45.3
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 3.7e-43 180.6 213 44.6
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 1.4e-26 125.6 342 30.7
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 4.4e-20 104.0 168 38.1
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 5.6e-15 87.0 120 46.7
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 8.1e-14 83.2 90 51.1
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 3.3e-07 61.2 414 24.4
A06p28820 Brassica napus HOM05D003696 ORTHO05D016804 1.6e-06 58.9 147 29.9


User provided reference genes

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