Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G03020 Striga asiatica HOM05D005676 ORTHO05D007375 0.0e+00 2165.6 1122 100.0
MSTRG.17345 Avicennia marina HOM05D005676 ORTHO05D007375 0.0e+00 1116.3 1199 54.5
Migut.B01876 Erythranthe guttata HOM05D005676 ORTHO05D007375 1.4e-308 1063.1 1170 54.4
SalBow3G4648 Salvia bowleyana HOM05D005676 ORTHO05D007375 1.9e-305 1052.7 1234 52.9
SalBow6G4948 Salvia bowleyana HOM05D005676 ORTHO05D007375 1.3e-293 1013.4 1164 52.6
Oeu043238.1 Olea europaea HOM05D005676 ORTHO05D007375 7.4e-265 917.9 994 53.6
Dinv32595 Davidia involucrata HOM05D005676 ORTHO05D007375 1.2e-259 900.6 1285 45.5
Sopen01g039730 Solanum pennellii HOM05D005676 ORTHO05D007375 1.1e-236 824.3 1200 43.5
Peaxi162Scf00786g00018 Petunia axillaris HOM05D005676 ORTHO05D007375 1.5e-236 823.9 1197 45.0
PGSC0003DMG400000228 Solanum tuberosum HOM05D005676 ORTHO05D007375 3.3e-236 822.8 1248 43.2
Nitab4.5_0013740g0030 Nicotiana tabacum HOM05D005676 ORTHO05D007375 8.0e-235 818.1 1197 44.9
Solyc01g096010.4 Solanum lycopersicum HOM05D005676 ORTHO05D007375 1.5e-233 813.9 1211 43.5
Nitab4.5_0000172g0490 Nicotiana tabacum HOM05D005676 ORTHO05D007375 8.3e-232 808.1 1178 45.1
CAN.G1415.28 Capsicum annuum HOM05D005676 ORTHO05D007375 5.4e-231 805.4 1192 44.4
unitig_899.g14797 Utricularia gibba HOM05D005676 ORTHO05D007375 5.9e-230 802.0 1150 44.3
Prupe.2G189000 Prunus persica HOM05D005676 ORTHO05D007375 7.3e-228 795.0 1194 43.8
RcHm_v2.0_Chr1g0359591 Rosa chinensis HOM05D005676 ORTHO05D007375 6.8e-226 788.5 1195 43.5
TAR636G2851 Trochodendron aralioides HOM05D005676 ORTHO05D007375 7.5e-225 785.0 1246 42.0
MD01G1081300 Malus domestica HOM05D005676 ORTHO05D007375 1.3e-224 784.3 1166 43.9
FAN10G1066 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.4e-223 780.8 1174 43.9
QL04p060782 Quercus lobata HOM05D005676 ORTHO05D007375 7.0e-223 778.5 1205 43.7
FAN06G4290 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.2e-222 777.7 1190 43.4
FAN10G0710 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.2e-222 777.7 1174 43.6
FvH4_7g16470 Fragaria vesca HOM05D005676 ORTHO05D007375 3.5e-222 776.2 1189 43.5
Cfa003798 Carpinus fangiana HOM05D005676 ORTHO05D007375 7.8e-222 775.0 1200 43.4
FAN06G1134 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.0e-221 774.6 1190 43.4
Thecc.01G342000 Theobroma cacao HOM05D005676 ORTHO05D007375 1.7e-221 773.9 1229 42.2
MELO3C006021.2 Cucumis melo HOM05D005676 ORTHO05D007375 1.5e-220 770.8 1202 42.8
FAN03G1248 Fragaria x ananassa HOM05D005676 ORTHO05D007375 4.3e-220 769.2 1188 43.5
ClCG05G000790 Citrullus lanatus HOM05D005676 ORTHO05D007375 7.3e-220 768.5 1188 43.3
Lalb_Chr17g0342721 Lupinus albus HOM05D005676 ORTHO05D007375 1.2e-219 767.7 1253 41.7
arahy.Tifrunner.gnm1.ann1.FH2LCI Arachis hypogaea HOM05D005676 ORTHO05D007375 6.8e-218 761.9 1246 41.3
PGR031G0643 Punica granatum HOM05D005676 ORTHO05D007375 2.0e-217 760.4 1113 43.5
arahy.Tifrunner.gnm1.ann1.L1WQQA Arachis hypogaea HOM05D005676 ORTHO05D007375 4.4e-217 759.2 1245 41.2
Sc01g0002640 Simmondsia chinensis HOM05D005676 ORTHO05D007375 5.8e-217 758.8 1277 40.7
DCAR_005392 Daucus carota HOM05D005676 ORTHO05D007375 2.2e-216 756.9 1259 40.8
Lj9A598G65 Lonicera japonica HOM05D005676 ORTHO05D007375 2.2e-216 756.9 1254 40.7
Nn1g00247 Nelumbo nucifera HOM05D005676 ORTHO05D007375 3.7e-216 756.1 1163 42.0
Manes.01G246200 Manihot esculenta HOM05D005676 ORTHO05D007375 1.9e-215 753.8 1202 41.8
Sed0007378 Sechium edule HOM05D005676 ORTHO05D007375 3.2e-215 753.1 1177 43.4
Gohir.A11G096900 Gossypium hirsutum HOM05D005676 ORTHO05D007375 1.2e-214 751.1 1224 41.3
Actinidia10141 Actinidia chinensis HOM05D005676 ORTHO05D007375 6.0e-214 748.8 1354 39.8
CsaV3_3G008030 Cucumis sativus L. HOM05D005676 ORTHO05D007375 1.7e-213 747.3 1205 42.2
Potri.014G099100 Populus trichocarpa HOM05D005676 ORTHO05D007375 1.1e-212 744.6 1208 40.4
Atru.chr5.673 Acer truncatum HOM05D005676 ORTHO05D007375 1.9e-212 743.8 1200 41.4
GSVIVG01027152001 Vitis vinifera HOM05D005676 ORTHO05D007375 1.9e-212 743.8 1046 44.8
Duzib268G0021 Durio zibethinus HOM05D005676 ORTHO05D007375 9.5e-212 741.5 1226 40.2
Sabra14G0072700 Salix brachista HOM05D005676 ORTHO05D007375 2.8e-211 740.0 1214 40.5
TPR.G16793 Trifolium pratense HOM05D005676 ORTHO05D007375 6.2e-211 738.8 1245 41.1
Gorai.007G108400 Gossypium raimondii HOM05D005676 ORTHO05D007375 1.1e-210 738.0 1208 40.9
Lj3g0008614 Lotus japonicus HOM05D005676 ORTHO05D007375 6.8e-210 735.3 1269 40.7
Ciclev10023383m.g Citrus clementina HOM05D005676 ORTHO05D007375 1.7e-208 730.7 1107 43.5
Ah.05g179510 Amaranthus hybridus HOM05D005676 ORTHO05D007375 8.3e-208 728.4 1364 37.8
BcaC08g45161 Brassica carinata HOM05D005676 ORTHO05D007375 2.3e-205 720.3 1137 41.6
C06p27960 Brassica napus HOM05D005676 ORTHO05D007375 2.3e-205 720.3 1137 41.6
EL10Ac1g00264 Beta vulgaris HOM05D005676 ORTHO05D007375 3.9e-205 719.5 1388 37.6
AL5G44340 Arabidopsis lyrata HOM05D005676 ORTHO05D007375 8.6e-205 718.4 1141 41.5
THA.LOC104817362 Tarenaya hassleriana HOM05D005676 ORTHO05D007375 8.6e-205 718.4 1209 40.3
CSS0030996 Camellia sinensis var. sinensis HOM05D005676 ORTHO05D007375 1.9e-204 717.2 1093 43.5
Phvul.010G114600 Phaseolus vulgaris HOM05D005676 ORTHO05D007375 1.2e-203 714.5 1283 39.4
Aqoxy7G00081 Aquilegia oxysepala HOM05D005676 ORTHO05D007375 1.6e-203 714.1 1237 38.7
A07p25740 Brassica napus HOM05D005676 ORTHO05D007375 2.1e-203 713.8 1143 41.9
Hund16716 Selenicereus undatus HOM05D005676 ORTHO05D007375 2.8e-203 713.4 1329 37.5
COL.COLO4_06282 Corchorus olitorius HOM05D005676 ORTHO05D007375 4.7e-203 712.6 1170 40.6
Lsat_1_v5_gn_3_140321 Lactuca sativa HOM05D005676 ORTHO05D007375 6.2e-203 712.2 1181 41.7
Haze_15661 Corylus avellana HOM05D005676 ORTHO05D007375 4.0e-202 709.5 1176 41.5
Glyma.16G024100 Glycine max HOM05D005676 ORTHO05D007375 4.0e-202 709.5 1303 40.1
AT3G61780 Arabidopsis thaliana HOM05D005676 ORTHO05D007375 6.8e-202 708.8 1063 43.4
BraA07t30214Z Brassica rapa HOM05D005676 ORTHO05D007375 8.9e-202 708.4 1143 41.9
BolC6t37957H Brassica oleracea HOM05D005676 ORTHO05D007375 1.7e-200 704.1 1137 41.2
Medtr8g027605 Medicago truncatula HOM05D005676 ORTHO05D007375 1.1e-199 701.4 1234 39.8
Aa31LG10G15770 Aethionema arabicum HOM05D005676 ORTHO05D007375 2.4e-199 700.3 1175 39.9
Carub.0005s2852 Capsella rubella HOM05D005676 ORTHO05D007375 5.4e-199 699.1 1189 39.7
Sp5g01590 Schrenkiella parvula HOM05D005676 ORTHO05D007375 3.5e-198 696.4 1209 39.9
VMungo0331G0849 Vigna mungo HOM05D005676 ORTHO05D007375 3.4e-193 679.9 1398 36.6
Cc02_g39430 Coffea canephora HOM05D005676 ORTHO05D007375 5.8e-193 679.1 975 44.6
CiPaw.02G041000 Carya illinoinensis HOM05D005676 ORTHO05D007375 1.1e-191 674.9 958 45.8
CARHR172110 Cardamine hirsuta HOM05D005676 ORTHO05D007375 9.3e-191 671.8 1047 42.5
Thhalv10005757m.g Eutrema salsugineum HOM05D005676 ORTHO05D007375 4.6e-190 669.5 1199 38.8
AUR62004498 Chenopodium quinoa HOM05D005676 ORTHO05D007375 3.6e-187 659.8 1381 36.5
AUR62023455 Chenopodium quinoa HOM05D005676 ORTHO05D007375 4.8e-187 659.4 1365 37.2
Psat4g161440 Pisum sativum HOM05D005676 ORTHO05D007375 6.2e-187 659.1 1338 36.1
Cpa.g.sc96.24 Carica papaya HOM05D005676 ORTHO05D007375 4.9e-184 649.4 1037 40.9
CDE02G4093 Ceratophyllum demersum HOM05D005676 ORTHO05D007375 1.3e-181 641.3 1218 38.4
Eucgr.D02379 Eucalyptus grandis HOM05D005676 ORTHO05D007375 1.1e-170 605.1 966 41.5
HanXRQChr11g0352981 Helianthus annuus HOM05D005676 ORTHO05D007375 1.5e-169 601.3 1022 41.0
Hma1.2p1_0139F.1_g063260 Hydrangea macrophylla HOM05D005676 ORTHO05D007375 4.2e-167 593.2 648 51.4
BcaC08g45164 Brassica carinata HOM05D005676 ORTHO05D007375 1.8e-165 587.8 1004 39.8
Ca_23531_v3 Cicer arietinum L. HOM05D005676 ORTHO05D007375 3.0e-165 587.0 930 41.2
MBI06_g46583_MAGBIO Magnolia biondii HOM05D005676 ORTHO05D007375 6.5e-160 569.3 900 42.4
ECA246G1832 Erigeron canadensis HOM05D000467 ORTHO05D000379 1.0e-149 535.4 616 49.4
ATR0602G016 Amborella trichopoda HOM05D005676 ORTHO05D007375 1.3e-128 465.3 1125 33.7
Gohir.D11G101600 Gossypium hirsutum HOM05D005676 ORTHO05D007375 1.0e-104 386.0 871 34.9
AT5G28400 Arabidopsis thaliana HOM05D005676 ORTHO05D007375 2.3e-104 384.8 900 34.9
Glyma.07G055432 Glycine max HOM05D005676 ORTHO05D007375 1.8e-93 348.6 280 61.1
Actinidia20244 Actinidia chinensis HOM05D005676 ORTHO05D007375 8.7e-80 303.1 498 40.8
AT5G28320 Arabidopsis thaliana HOM05D005676 ORTHO05D007375 2.4e-77 295.0 849 31.7
AagrBONN_evm.TU.Sc2ySwM_368.2853 Anthoceros agrestis HOM05D005676 ORTHO05D007375 2.4e-74 285.0 1073 27.5
AL5G43810 Arabidopsis lyrata HOM05D005676 ORTHO05D007375 1.3e-70 272.7 520 39.0
Oeu007893.1 Olea europaea HOM05D005676 ORTHO05D007375 3.1e-69 268.1 549 36.1
Mapoly0008s0022 Marchantia polymorpha HOM05D005676 ORTHO05D007375 3.2e-66 258.1 1109 26.1
Gohir.D11G101550 Gossypium hirsutum HOM05D005676 ORTHO05D007375 3.5e-65 254.6 204 62.3
MD07G1150200 Malus domestica HOM05D005676 ORTHO05D007375 6.7e-64 250.4 509 38.5
Pp3c12_1870 Physcomitrium patens HOM05D005676 ORTHO05D007375 2.8e-54 218.4 914 26.7
MD07G1150100 Malus domestica HOM05D005676 ORTHO05D007375 1.9e-50 205.7 169 61.5
MBI06_g46582_MAGBIO Magnolia biondii HOM05D005676 ORTHO05D007375 1.6e-28 132.9 234 36.3
FAN06G2271 Fragaria x ananassa HOM05D005676 ORTHO05D007375 3.6e-25 121.7 485 28.0
ATR0602G131 Amborella trichopoda HOM05D005676 ORTHO05D007375 9.7e-23 113.6 72 77.8
SEGI_31295 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 2.2e-22 112.5 431 26.7
FAN06G3424 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.8e-21 109.4 232 37.1
FvH4_7g16530 Fragaria vesca HOM05D005676 ORTHO05D007375 2.7e-20 105.5 61 77.0
Cpa.g.sc96.22 Carica papaya HOM05D005676 ORTHO05D007375 4.5e-20 104.8 83 65.1
Glyma.07G055366 Glycine max HOM05D005676 ORTHO05D007375 5.0e-19 101.3 243 33.3
TPR.G23509 Trifolium pratense HOM05D005676 ORTHO05D007375 5.0e-19 101.3 123 48.0
CBR_g23443 Chara braunii HOM05D005676 ORTHO05D007375 1.5e-15 89.7 558 20.4
FAN03G0974 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.5e-15 89.7 300 31.3
SEGI_23777 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 2.0e-15 89.4 160 32.5
MD07G1150300 Malus domestica HOM05D005676 ORTHO05D007375 2.2e-14 85.9 171 38.0
Ca_23165_v3 Cicer arietinum L. HOM05D005676 ORTHO05D007375 2.2e-11 75.9 131 33.6
FAN03G3457 Fragaria x ananassa HOM05D005676 ORTHO05D007375 3.8e-11 75.1 229 30.6
FAN06G0289 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.9e-10 72.8 80 48.8
FAN03G0940 Fragaria x ananassa HOM05D005676 ORTHO05D007375 3.7e-06 58.5 80 42.5
FvH4_7g16531 Fragaria vesca HOM05D005676 ORTHO05D007375 8.3e-06 57.4 80 42.5


User provided reference genes

Program Settings