Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G02985 Striga asiatica HOM05D008545 ORTHO05D010341 1.6e-112 409.5 205 100.0
MSTRG.17319 Avicennia marina HOM05D008545 ORTHO05D010341 6.3e-45 184.9 200 53.0
SGA_v2.0_scaffold548G52844 Striga asiatica HOM05D046447 ORTHO05D010341 6.9e-44 181.4 189 59.8
SalBow3G1564 Salvia bowleyana HOM05D008545 ORTHO05D010341 9.7e-30 134.4 217 40.1
Oeu007845.1 Olea europaea HOM05D008545 ORTHO05D010341 1.2e-22 110.9 213 37.6
Thecc.01G347700 Theobroma cacao HOM05D008545 ORTHO05D010341 1.5e-22 110.5 237 32.9
Nitab4.5_0002262g0100 Nicotiana tabacum HOM05D008545 ORTHO05D010341 2.8e-21 106.3 215 33.5
Migut.B01833 Erythranthe guttata HOM05D008545 ORTHO05D010341 4.8e-21 105.5 111 53.2
Potri.002G167500 Populus trichocarpa HOM05D008545 ORTHO05D010341 1.1e-20 104.4 144 44.4
Atru.chr5.619 Acer truncatum HOM05D008545 ORTHO05D010341 1.4e-20 104.0 227 34.4
Lj9A592T71 Lonicera japonica HOM05D008545 ORTHO05D010341 1.8e-20 103.6 236 33.5
Duzib138G0500 Durio zibethinus HOM05D008545 ORTHO05D010341 7.0e-20 101.7 237 31.2
Lj7A504G55 Lonicera japonica HOM05D008545 ORTHO05D010341 1.2e-19 100.9 118 45.8
Manes.01G249300 Manihot esculenta HOM05D008545 ORTHO05D010341 1.2e-19 100.9 228 35.5
TAR629G2366 Trochodendron aralioides HOM05D008545 ORTHO05D010341 2.3e-18 96.7 242 31.8
GSVIVG01027047001 Vitis vinifera HOM05D008545 ORTHO05D010341 2.5e-17 93.2 231 32.5
Gohir.A07G139700 Gossypium hirsutum HOM05D008545 ORTHO05D010341 3.2e-17 92.8 124 41.9
Gohir.D07G144800 Gossypium hirsutum HOM05D008545 ORTHO05D010341 3.2e-17 92.8 124 41.9
Gorai.001G156800 Gossypium raimondii HOM05D008545 ORTHO05D010341 3.2e-17 92.8 124 41.9
Potri.014G094600 Populus trichocarpa HOM05D008545 ORTHO05D010341 3.2e-17 92.8 136 41.2
CAN.G310.5 Capsicum annuum HOM05D008545 ORTHO05D010341 7.2e-17 91.7 118 40.7
Solyc05g050240.3 Solanum lycopersicum HOM05D008545 ORTHO05D010341 1.6e-16 90.5 114 41.2
PGSC0003DMG400033878 Solanum tuberosum HOM05D008545 ORTHO05D010341 1.6e-16 90.5 114 40.4
Sabra14G0069200 Salix brachista HOM05D008545 ORTHO05D010341 2.8e-16 89.7 144 39.6
Eucgr.D02345 Eucalyptus grandis HOM05D008545 ORTHO05D010341 6.1e-16 88.6 123 39.0
Peaxi162Scf00403g00718 Petunia axillaris HOM05D008545 ORTHO05D010341 6.1e-16 88.6 111 41.4
CSS0024380 Camellia sinensis var. sinensis HOM05D008545 ORTHO05D010341 1.8e-15 87.0 141 38.3
CANSAT56G3993 Cannabis sativa HOM05D008545 ORTHO05D010341 3.0e-15 86.3 124 41.1
COL.COLO4_06334 Corchorus olitorius HOM05D002314 ORTHO05D002538 3.0e-15 86.3 89 49.4
Dinv43892 Davidia involucrata HOM05D008545 ORTHO05D010341 6.8e-15 85.1 205 31.7
PGR031G2054 Punica granatum HOM05D008545 ORTHO05D010341 2.6e-14 83.2 235 31.1
MD01G1075500 Malus domestica HOM05D008545 ORTHO05D010341 1.1e-12 77.8 103 38.8
Hma1.2p1_0384F.1_g141050 Hydrangea macrophylla HOM05D008545 ORTHO05D010341 1.8e-12 77.0 81 48.1
Actinidia20194 Actinidia chinensis HOM05D008545 ORTHO05D010341 3.5e-11 72.8 159 39.0
MD07G1144400 Malus domestica HOM05D008545 ORTHO05D010341 5.9e-11 72.0 107 36.4
DCAR_016077 Daucus carota HOM05D009167 ORTHO05D010341 1.3e-10 70.9 218 27.5
Nitab4.5_0003779g0040 Nicotiana tabacum HOM05D008545 ORTHO05D010341 2.3e-10 70.1 69 46.4
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 3.3e-09 66.2 136 34.6
RcHm_v2.0_Chr1g0358691 Rosa chinensis HOM05D008545 ORTHO05D010341 9.5e-09 64.7 107 39.3
FvH4_7g15870 Fragaria vesca HOM05D008545 ORTHO05D010341 1.6e-08 63.9 107 39.3
FAN06G5050 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.6e-08 63.9 107 39.3
Sopen05g028690 Solanum pennellii HOM05D008545 ORTHO05D010341 8.0e-08 61.6 70 45.7
FAN03G1297 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.4e-07 60.8 107 35.5
FAN10G0919 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.8e-07 60.5 94 39.4
FAN10G3148 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.8e-07 60.5 94 39.4
Prupe.2G183300 Prunus persica HOM05D008545 ORTHO05D010341 1.8e-07 60.5 201 27.9
CANSAT56G3625 Cannabis sativa HOM05D008545 ORTHO05D010341 3.0e-07 59.7 68 42.6
FAN01G1302 Fragaria x ananassa HOM05D008545 ORTHO05D010341 6.8e-07 58.5 90 40.0
Cpa.g.sc194.12 Carica papaya HOM05D008545 ORTHO05D010341 2.0e-06 57.0 74 39.2


User provided reference genes

Program Settings