Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G02892 Striga asiatica HOM05D006340 ORTHO05D007568 6.3e-265 917.1 554 100.0
MSTRG.27938 Avicennia marina HOM05D006340 ORTHO05D007568 7.8e-90 335.5 408 50.7
Migut.N00937 Erythranthe guttata HOM05D006340 ORTHO05D007568 9.2e-75 285.4 651 45.8
Sabra13G0006900 Salix brachista HOM05D006340 ORTHO05D007568 3.2e-67 260.4 664 43.2
Cc02_g35160 Coffea canephora HOM05D006340 ORTHO05D007568 3.5e-66 256.9 653 45.5
Actinidia16863 Actinidia chinensis HOM05D006340 ORTHO05D007568 5.1e-65 253.1 690 41.6
Lju926C5T2 Lonicera japonica HOM05D006340 ORTHO05D007568 3.8e-60 236.9 637 44.0
ClCG02G014860 Citrullus lanatus HOM05D006340 ORTHO05D007568 4.9e-60 236.5 664 37.3
Lj5C328T5 Lonicera japonica HOM05D006340 ORTHO05D007568 7.1e-59 232.6 613 45.0
Oeu053742.1 Olea europaea HOM05D006340 ORTHO05D007568 4.6e-58 229.9 648 46.0
Dinv30898 Davidia involucrata HOM05D006340 ORTHO05D007568 1.0e-57 228.8 626 33.7
MBI18_g32031_MAGBIO Magnolia biondii HOM05D006340 ORTHO05D007568 5.1e-57 226.5 646 36.5
Oeu052936.1 Olea europaea HOM05D006340 ORTHO05D007568 4.8e-55 219.9 662 44.3
Dinv24462 Davidia involucrata HOM05D006340 ORTHO05D007568 1.1e-54 218.8 415 38.6
MBI19_g03242_MAGBIO Magnolia biondii HOM05D006340 ORTHO05D007568 5.3e-54 216.5 534 44.0
MELO3C004178.2 Cucumis melo HOM05D006340 ORTHO05D007568 6.9e-54 216.1 665 39.4
Manes.09G177400 Manihot esculenta HOM05D006340 ORTHO05D007568 6.9e-54 216.1 620 42.4
DCAR_029344 Daucus carota HOM05D006340 ORTHO05D007568 1.7e-52 211.5 625 39.2
Nitab4.5_0004525g0020 Nicotiana tabacum HOM05D006340 ORTHO05D007568 1.1e-51 208.8 643 42.3
vmacro01568 Vaccinium macrocarpon HOM05D006340 ORTHO05D007568 9.3e-51 205.7 667 37.6
CSS0010691 Camellia sinensis var. sinensis HOM05D006340 ORTHO05D007568 2.1e-50 204.5 665 41.4
CAN.G1076.21 Capsicum annuum HOM05D006340 ORTHO05D007568 4.6e-50 203.4 657 41.4
Haze_04056 Corylus avellana HOM05D006340 ORTHO05D007568 5.1e-49 199.9 657 41.6
Hma1.2p1_0008F-1.1_g005560 Hydrangea macrophylla HOM05D006340 ORTHO05D007568 1.1e-48 198.7 653 42.4
Nitab4.5_0001338g0100 Nicotiana tabacum HOM05D006340 ORTHO05D007568 5.6e-48 196.4 556 46.4
QL03p014074 Quercus lobata HOM05D006340 ORTHO05D007568 7.4e-48 196.1 663 41.2
Actinidia35518 Actinidia chinensis HOM05D006340 ORTHO05D007568 1.3e-47 195.3 651 41.0
Potri.013G008200 Populus trichocarpa HOM05D006340 ORTHO05D007568 3.7e-47 193.7 658 41.8
Potri.005G013000 Populus trichocarpa HOM05D006340 ORTHO05D007568 4.0e-46 190.3 659 41.3
SalBow3G0642 Salvia bowleyana HOM05D006340 ORTHO05D007568 4.5e-45 186.8 314 43.6
DCAR_025287 Daucus carota HOM05D006340 ORTHO05D007568 7.6e-45 186.0 665 40.5
TAR362G0132 Trochodendron aralioides HOM05D006340 ORTHO05D007568 1.3e-44 185.3 661 39.9
Phvul.007G201700 Phaseolus vulgaris HOM05D006340 ORTHO05D007568 1.7e-44 184.9 639 42.3
Sabra05G0021400 Salix brachista HOM05D006340 ORTHO05D007568 1.7e-44 184.9 674 30.4
Atru.chr2.357 Acer truncatum HOM05D006340 ORTHO05D007568 3.8e-44 183.7 669 39.2
AUR62006742 Chenopodium quinoa HOM05D006340 ORTHO05D007568 3.2e-43 180.6 644 40.5
Sed0017369 Sechium edule HOM05D006340 ORTHO05D007568 3.2e-43 180.6 645 39.1
Ciclev10000538m.g Citrus clementina HOM05D006340 ORTHO05D007568 4.2e-43 180.3 667 39.9
Cfa006707 Carpinus fangiana HOM05D006340 ORTHO05D007568 5.5e-43 179.9 673 40.7
Lsat_1_v5_gn_5_40480 Lactuca sativa HOM05D006340 ORTHO05D007568 7.1e-43 179.5 646 41.5
THA.LOC104816894 Tarenaya hassleriana HOM05D006340 ORTHO05D007568 1.2e-42 178.7 543 43.6
CsaV3_2G007150 Cucumis sativus L. HOM05D006340 ORTHO05D007568 2.1e-42 177.9 643 41.2
TWI36G0703 Tripterygium wilfordii HOM05D006340 ORTHO05D007568 2.7e-42 177.6 661 40.7
AUR62000387 Chenopodium quinoa HOM05D006340 ORTHO05D007568 2.3e-41 174.5 645 40.2
Prupe.6G312400 Prunus persica HOM05D006340 ORTHO05D007568 2.3e-41 174.5 666 40.5
VMungo0720G2454 Vigna mungo HOM05D006340 ORTHO05D007568 1.1e-40 172.2 541 44.2
Sed0011043 Sechium edule HOM05D006340 ORTHO05D007568 1.5e-40 171.8 659 39.9
Peaxi162Scf01061g00014 Petunia axillaris HOM05D006340 ORTHO05D007568 1.9e-40 171.4 431 33.6
Glyma.20G096700 Glycine max HOM05D006340 ORTHO05D007568 2.5e-40 171.0 642 41.6
CiPaw.07G030100 Carya illinoinensis HOM05D006340 ORTHO05D007568 3.3e-40 170.6 663 40.6
Glyma.10G146700 Glycine max HOM05D006340 ORTHO05D007568 4.3e-40 170.2 639 40.8
GSVIVG01031248001 Vitis vinifera HOM05D006340 ORTHO05D007568 4.3e-40 170.2 659 40.8
ECA246G2180 Erigeron canadensis HOM05D006340 ORTHO05D007568 1.6e-39 168.3 634 42.1
TAR633G1326 Trochodendron aralioides HOM05D006340 ORTHO05D007568 2.1e-39 167.9 654 38.5
Duzib128G1170 Durio zibethinus HOM05D006340 ORTHO05D007568 1.1e-38 165.6 544 43.9
PGSC0003DMG400002763 Solanum tuberosum HOM05D006340 ORTHO05D007568 1.1e-38 165.6 660 39.8
MD00G1208300 Malus domestica HOM05D006340 ORTHO05D007568 1.8e-38 164.9 663 39.5
Os01g0300900 Oryza sativa ssp. japonica HOM05D006340 ORTHO05D007568 1.8e-38 164.9 633 36.8
TPR.G2586 Trifolium pratense HOM05D006340 ORTHO05D007568 3.1e-38 164.1 672 39.3
Sopen01g044100 Solanum pennellii HOM05D006340 ORTHO05D007568 5.3e-38 163.3 661 39.9
arahy.Tifrunner.gnm1.ann1.9H9EE5 Arachis hypogaea HOM05D006340 ORTHO05D007568 6.9e-38 162.9 566 37.6
HanXRQChr11g0324231 Helianthus annuus HOM05D006340 ORTHO05D007568 1.2e-37 162.2 643 40.3
Lj5g0007706 Lotus japonicus HOM05D006340 ORTHO05D007568 1.5e-37 161.8 659 39.8
PGR031G1700 Punica granatum HOM05D006340 ORTHO05D007568 2.0e-37 161.4 626 41.1
arahy.Tifrunner.gnm1.ann1.35WTTC Arachis hypogaea HOM05D006340 ORTHO05D007568 7.6e-37 159.5 672 39.0
Duzib177G0712 Durio zibethinus HOM05D006340 ORTHO05D007568 7.6e-37 159.5 669 39.5
Thecc.05G323700 Theobroma cacao HOM05D006340 ORTHO05D007568 2.2e-36 157.9 672 38.8
Medtr1g084120 Medicago truncatula HOM05D006340 ORTHO05D007568 2.9e-36 157.5 666 38.0
Nn3g21728 Nelumbo nucifera HOM05D006340 ORTHO05D007568 3.8e-36 157.1 658 38.8
Zm00001eb340330 Zea mays HOM05D006340 ORTHO05D007568 8.4e-36 156.0 542 40.2
PSO761G0363 Papaver somniferum HOM05D006340 ORTHO05D007568 1.1e-35 155.6 657 38.7
CiPaw.08G154900 Carya illinoinensis HOM05D006340 ORTHO05D007568 1.9e-35 154.8 660 40.3
arahy.Tifrunner.gnm1.ann1.31L8TN Arachis hypogaea HOM05D006340 ORTHO05D007568 5.5e-35 153.3 563 42.5
Zm00001eb130130 Zea mays HOM05D006340 ORTHO05D007568 5.5e-35 153.3 541 35.9
Aqoxy2G02721 Aquilegia oxysepala HOM05D006340 ORTHO05D007568 7.2e-35 152.9 655 38.9
Hund07311 Selenicereus undatus HOM05D006340 ORTHO05D007568 7.2e-35 152.9 646 39.0
Ca_10176_v3 Cicer arietinum L. HOM05D006340 ORTHO05D007568 2.1e-34 151.4 661 39.8
COL.COLO4_05545 Corchorus olitorius HOM05D006340 ORTHO05D007568 2.1e-34 151.4 666 39.2
Rhsim11G0096500 Rhododendron simsii HOM05D006340 ORTHO05D007568 4.6e-34 150.2 647 37.6
CANSAT54G2981 Cannabis sativa HOM05D006340 ORTHO05D007568 7.9e-34 149.4 653 39.2
Gohir.D11G284300 Gossypium hirsutum HOM05D006340 ORTHO05D007568 1.0e-33 149.1 656 39.5
PSO210G6591 Papaver somniferum HOM05D006340 ORTHO05D007568 1.8e-33 148.3 560 40.5
Sabra05G0020800 Salix brachista HOM05D006340 ORTHO05D007568 1.9e-32 144.8 369 49.3
Cpa.g.sc48.167 Carica papaya HOM05D006340 ORTHO05D007568 3.3e-32 144.1 666 37.7
RcHm_v2.0_Chr3g0457201 Rosa chinensis HOM05D006340 ORTHO05D007568 7.4e-32 142.9 566 41.3
arahy.Tifrunner.gnm1.ann1.Y7QP4L Arachis hypogaea HOM05D006340 ORTHO05D007568 1.3e-31 142.1 610 38.9
ATR0693G206 Amborella trichopoda HOM05D006340 ORTHO05D007568 2.8e-31 141.0 644 38.7
Gorai.007G307200 Gossypium raimondii HOM05D006340 ORTHO05D007568 4.8e-31 140.2 656 38.9
MD12G1205300 Malus domestica HOM05D006340 ORTHO05D007568 1.8e-30 138.3 681 38.6
Lalb_Chr02g0147781 Lupinus albus HOM05D006340 ORTHO05D007568 3.1e-30 137.5 640 37.5
FAN02G1774 Fragaria x ananassa HOM05D006340 ORTHO05D007568 5.3e-30 136.7 605 40.2
FAN14G3207 Fragaria x ananassa HOM05D006340 ORTHO05D007568 1.5e-29 135.2 684 37.7
Gohir.A08G205400 Gossypium hirsutum HOM05D006340 ORTHO05D007568 2.6e-29 134.4 647 38.8
EL10Ac4g09463 Beta vulgaris HOM05D006340 ORTHO05D007568 4.5e-29 133.7 650 37.7
FvH4_6g07501 Fragaria vesca HOM05D006340 ORTHO05D007568 7.7e-29 132.9 605 39.7
Ah.06g195990 Amaranthus hybridus HOM05D006340 ORTHO05D007568 3.8e-28 130.6 639 38.0
Gorai.004G236300 Gossypium raimondii HOM05D006340 ORTHO05D007568 6.5e-28 129.8 662 36.7
unitig_52.g17414 Utricularia gibba HOM05D006340 ORTHO05D007568 4.2e-27 127.1 327 40.7
MSTRG.27937 Avicennia marina HOM05D006340 ORTHO05D007568 3.9e-25 120.6 71 71.8
Eucgr.H03294 Eucalyptus grandis HOM05D006340 ORTHO05D007568 6.7e-25 119.8 645 36.4
Gohir.D08G222500 Gossypium hirsutum HOM05D006340 ORTHO05D007568 4.3e-24 117.1 657 36.7
Solyc01g100600.4 Solanum lycopersicum HOM05D006340 ORTHO05D007568 7.4e-24 116.3 353 32.3
Phvul.001G224800 Phaseolus vulgaris HOM05D006340 ORTHO05D007568 3.1e-22 110.9 647 36.2
Psat6g152600 Pisum sativum HOM05D006340 ORTHO05D007568 3.1e-22 110.9 512 27.5
Sabra05G0009200 Salix brachista HOM05D006340 ORTHO05D007568 2.6e-21 107.8 71 66.2
Glyma.03G231000 Glycine max HOM05D006340 ORTHO05D007568 1.0e-20 105.9 631 36.5
CDE02G0367 Ceratophyllum demersum HOM05D006340 ORTHO05D007568 1.3e-20 105.5 557 37.9
HPP92_005420 Vanilla planifolia HOM05D006340 ORTHO05D007568 2.2e-20 104.8 645 36.7
Glyma.19G228200 Glycine max HOM05D006340 ORTHO05D007568 5.5e-19 100.1 631 36.5
VMungo1383G0056 Vigna mungo HOM05D006340 ORTHO05D007568 3.6e-18 97.4 648 36.3
THA.LOC104824492 Tarenaya hassleriana HOM05D006340 ORTHO05D007568 4.7e-18 97.1 64 64.1
Sabra05G0020900 Salix brachista HOM05D006340 ORTHO05D007568 6.1e-18 96.7 263 32.3
PSO541G0443 Papaver somniferum HOM05D006340 ORTHO05D007568 2.6e-16 91.3 238 30.3
CDE08G0055 Ceratophyllum demersum HOM05D006340 ORTHO05D007568 3.3e-16 90.9 327 33.0
Sabra05G0022400 Salix brachista HOM05D006340 ORTHO05D007568 2.2e-15 88.2 135 40.7
Dinv24463 Davidia involucrata HOM05D006340 ORTHO05D007568 7.0e-14 83.2 51 66.7
FAN09G1774 Fragaria x ananassa HOM05D006340 ORTHO05D007568 7.0e-14 83.2 300 29.7
Sc16g0009070 Simmondsia chinensis HOM05D006340 ORTHO05D007568 5.9e-13 80.1 239 30.1
SMO115G0101 Selaginella moellendorffii HOM05D006340 ORTHO05D007568 8.5e-12 76.3 628 28.0
FAN05G4753 Fragaria x ananassa HOM05D006340 ORTHO05D007568 1.5e-11 75.5 94 47.9
MBI18_g03639_MAGBIO Magnolia biondii HOM05D006340 ORTHO05D007568 1.7e-07 62.0 69 47.8


User provided reference genes

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