Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G02870 Striga asiatica HOM05D005335 ORTHO05D006472 1.8e-52 209.5 159 100.0
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 1.6e-16 90.1 180 53.9
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 2.8e-16 89.4 171 52.0
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 6.9e-15 84.7 132 43.9
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 2.6e-14 82.8 172 50.6
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 2.6e-14 82.8 172 50.6
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 3.4e-14 82.4 169 46.7
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 4.4e-14 82.0 132 60.6
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 5.8e-14 81.6 171 49.7
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 9.9e-14 80.9 129 59.7
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 1.7e-13 80.1 126 41.3
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 1.7e-13 80.1 130 59.2
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 1.7e-13 80.1 160 46.2
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 4.9e-13 78.6 163 33.1
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 4.9e-13 78.6 163 33.1
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 4.9e-13 78.6 128 39.1
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 6.4e-13 78.2 129 45.0
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 8.4e-13 77.8 171 49.1
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 1.1e-12 77.4 130 58.5
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 1.4e-12 77.0 163 32.5
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 1.9e-12 76.6 126 52.4
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 2.4e-12 76.3 163 31.9
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 2.4e-12 76.3 126 51.6
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 2.4e-12 76.3 130 56.2
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 2.4e-12 76.3 169 47.9
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 3.2e-12 75.9 144 53.5
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.2e-12 75.9 126 59.5
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 3.2e-12 75.9 126 59.5
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 3.2e-12 75.9 124 51.6
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 4.2e-12 75.5 162 37.7
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 4.2e-12 75.5 128 38.3
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 4.2e-12 75.5 128 38.3
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 5.4e-12 75.1 126 59.5
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 7.1e-12 74.7 169 40.8
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 7.1e-12 74.7 121 38.8
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 7.1e-12 74.7 173 35.3
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 7.1e-12 74.7 171 46.8
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 1.2e-11 73.9 121 38.8
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 1.2e-11 73.9 121 38.8
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 1.2e-11 73.9 131 38.2
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 1.6e-11 73.6 166 50.0
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 2.1e-11 73.2 172 48.3
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 2.1e-11 73.2 130 56.9
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 2.1e-11 73.2 133 48.1
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 3.5e-11 72.4 121 38.0
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 3.5e-11 72.4 121 38.0
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 3.5e-11 72.4 121 38.0
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.5e-11 72.4 130 44.6
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 3.5e-11 72.4 136 53.7
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 4.6e-11 72.0 161 51.6
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 4.6e-11 72.0 141 53.9
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 4.6e-11 72.0 141 53.9
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 6.0e-11 71.6 130 36.9
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 6.0e-11 71.6 176 48.3
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 6.0e-11 71.6 131 58.0
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 7.9e-11 71.2 130 36.9
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 7.9e-11 71.2 123 57.7
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 1.0e-10 70.9 170 48.8
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 1.0e-10 70.9 173 41.6
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 1.3e-10 70.5 121 37.2
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 1.3e-10 70.5 167 45.5
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 1.7e-10 70.1 121 36.4
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 1.7e-10 70.1 138 55.8
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.7e-10 70.1 130 37.7
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 3.0e-10 69.3 121 36.4
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 3.0e-10 69.3 173 48.0
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 3.0e-10 69.3 132 53.8
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 3.0e-10 69.3 163 41.7
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 3.9e-10 68.9 130 36.2
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 5.1e-10 68.6 137 48.9
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 5.1e-10 68.6 159 47.8
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 5.1e-10 68.6 163 48.5
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 5.1e-10 68.6 122 37.7
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 6.6e-10 68.2 123 57.7
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 8.7e-10 67.8 123 53.7
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 8.7e-10 67.8 121 36.4
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 8.7e-10 67.8 179 46.4
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 1.1e-09 67.4 155 45.8
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 1.5e-09 67.0 122 55.7
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 1.9e-09 66.6 108 41.7
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 1.9e-09 66.6 170 47.6
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 1.9e-09 66.6 122 40.2
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 1.9e-09 66.6 123 56.1
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 1.9e-09 66.6 130 52.3
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 1.9e-09 66.6 122 57.4
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 3.3e-09 65.9 90 38.9
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 4.3e-09 65.5 132 52.3
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 4.3e-09 65.5 178 51.7
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 4.3e-09 65.5 133 41.4
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 5.6e-09 65.1 163 46.0
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 5.6e-09 65.1 130 49.2
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 5.6e-09 65.1 121 50.4
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 7.3e-09 64.7 165 50.3
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 7.3e-09 64.7 174 42.5
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 1.3e-08 63.9 123 56.1
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 1.3e-08 63.9 122 55.7
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 1.3e-08 63.9 123 56.9
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 1.6e-08 63.5 124 34.7
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 1.6e-08 63.5 124 34.7
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 1.6e-08 63.5 170 47.1
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 2.1e-08 63.2 88 60.2
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 2.8e-08 62.8 127 53.5
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 4.8e-08 62.0 170 47.1
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 6.2e-08 61.6 123 35.8
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 6.2e-08 61.6 175 46.9
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.4e-07 60.5 175 45.1
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 1.8e-07 60.1 159 32.1
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 1.8e-07 60.1 135 51.1
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.8e-07 60.1 120 56.7
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 1.8e-07 60.1 133 54.1
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 2.4e-07 59.7 133 55.6
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 3.1e-07 59.3 135 51.1
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 3.1e-07 59.3 135 48.9
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 4.0e-07 58.9 88 67.0
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 5.3e-07 58.5 166 28.9
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 6.9e-07 58.2 135 51.9
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 1.2e-06 57.4 106 35.8
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 1.2e-06 57.4 121 33.9
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 1.2e-06 57.4 122 33.6
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 1.2e-06 57.4 88 65.9
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 2.0e-06 56.6 167 46.7
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 3.4e-06 55.8 107 36.4
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 3.4e-06 55.8 118 54.2
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 4.5e-06 55.5 88 63.6
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 7.6e-06 54.7 111 37.8
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 7.6e-06 54.7 123 35.0
THA.LOC104798946 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 7.6e-06 54.7 89 62.9
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 9.9e-06 54.3 133 51.1


User provided reference genes

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