Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G02801 Striga asiatica HOM05D000860 ORTHO05D006064 1.8e-145 519.2 259 100.0
Migut.H01212 Erythranthe guttata HOM05D000860 ORTHO05D006064 3.1e-25 119.8 98 64.3
MSTRG.12291 Avicennia marina HOM05D000860 ORTHO05D006064 1.2e-24 117.9 99 62.6
Solyc02g063460.1 Solanum lycopersicum HOM05D000860 ORTHO05D006064 8.5e-23 111.7 157 44.6
PGSC0003DMG400010404 Solanum tuberosum HOM05D000860 ORTHO05D006064 2.5e-22 110.2 157 44.6
Sopen02g014550 Solanum pennellii HOM05D000860 ORTHO05D006064 3.2e-22 109.8 157 43.9
Cc05_g05560 Coffea canephora HOM05D000860 ORTHO05D006064 5.5e-22 109.0 95 56.8
Oeu040640.1 Olea europaea HOM05D000860 ORTHO05D006064 3.4e-19 99.8 99 50.5
Nitab4.5_0007512g0030 Nicotiana tabacum HOM05D000860 ORTHO05D006064 7.5e-19 98.6 76 59.2
Nitab4.5_0000036g0430 Nicotiana tabacum HOM05D000860 ORTHO05D006064 3.7e-18 96.3 77 57.1
SGA_v2.0_scaffold159G37586 Striga asiatica HOM05D000860 ORTHO05D006064 4.8e-18 95.9 72 68.1
unitig_26.g9929 Utricularia gibba HOM05D000860 ORTHO05D006064 1.1e-17 94.7 79 58.2
Cfa014481 Carpinus fangiana HOM05D000860 ORTHO05D006064 2.4e-17 93.6 93 51.6
Haze_12996 Corylus avellana HOM05D000860 ORTHO05D006064 5.4e-17 92.4 93 50.5
Solyc02g091600.1 Solanum lycopersicum HOM05D000860 ORTHO05D006064 5.4e-17 92.4 76 55.3
Sopen02g036220 Solanum pennellii HOM05D000860 ORTHO05D006064 5.4e-17 92.4 76 55.3
PGSC0003DMG400030659 Solanum tuberosum HOM05D000860 ORTHO05D006064 5.4e-17 92.4 76 55.3
Lj8E120T0 Lonicera japonica HOM05D000860 ORTHO05D006064 7.0e-17 92.0 93 46.2
DCAR_009702 Daucus carota HOM05D000860 ORTHO05D006064 2.7e-16 90.1 119 44.5
Sabra13G0122200 Salix brachista HOM05D000860 ORTHO05D006064 2.7e-16 90.1 93 50.5
CAN.G1061.28 Capsicum annuum HOM05D000860 ORTHO05D006064 4.5e-16 89.4 76 56.6
Potri.013G152100 Populus trichocarpa HOM05D000860 ORTHO05D006064 4.5e-16 89.4 93 48.4
Eucgr.A01742 Eucalyptus grandis HOM05D000860 ORTHO05D006064 5.9e-16 89.0 99 47.5
Potri.019G125300 Populus trichocarpa HOM05D000860 ORTHO05D006064 7.7e-16 88.6 93 49.5
Hma1.2p1_0712F.1_g207590 Hydrangea macrophylla HOM05D000860 ORTHO05D006064 1.3e-15 87.8 78 51.3
MD09G1127700 Malus domestica HOM05D000860 ORTHO05D006064 1.7e-15 87.4 94 45.7
Manes.12G078700 Manihot esculenta HOM05D000860 ORTHO05D006064 2.9e-15 86.7 123 42.3
RcHm_v2.0_Chr2g0160701 Rosa chinensis HOM05D000860 ORTHO05D006064 2.9e-15 86.7 77 54.5
SGA_v2.0_scaffold12G06091 Striga asiatica HOM05D026302 ORTHO05D405761 2.9e-15 86.7 230 35.7
Cpa.g.sc34.49 Carica papaya HOM05D000860 ORTHO05D006064 3.8e-15 86.3 77 53.2
CARHR234350 Cardamine hirsuta HOM05D000860 ORTHO05D006064 6.6e-15 85.5 99 40.4
FAN05G0414 Fragaria x ananassa HOM05D000860 ORTHO05D006064 6.6e-15 85.5 77 53.2
C07p55200 Brassica napus HOM05D000860 ORTHO05D006064 8.6e-15 85.1 120 40.0
Prupe.3G223700 Prunus persica HOM05D000860 ORTHO05D006064 8.6e-15 85.1 77 51.9
Peaxi162Scf00943g00045 Petunia axillaris HOM05D000860 ORTHO05D006064 1.1e-14 84.7 81 50.6
PGR042G0516 Punica granatum HOM05D000860 ORTHO05D006064 1.9e-14 84.0 81 53.1
AL7G26100 Arabidopsis lyrata HOM05D000860 ORTHO05D006064 2.5e-14 83.6 81 46.9
CiPaw.04G120200 Carya illinoinensis HOM05D000860 ORTHO05D006064 2.5e-14 83.6 93 46.2
CsaV3_7G003950 Cucumis sativus L. HOM05D000860 ORTHO05D006064 2.5e-14 83.6 76 55.3
Peaxi162Scf00703g00019 Petunia axillaris HOM05D000860 ORTHO05D006064 2.5e-14 83.6 76 53.9
A03p56870 Brassica napus HOM05D000860 ORTHO05D006064 3.3e-14 83.2 120 40.0
BolC7t45993H Brassica oleracea HOM05D000860 ORTHO05D006064 3.3e-14 83.2 120 40.0
BraA03t14755Z Brassica rapa HOM05D000860 ORTHO05D006064 3.3e-14 83.2 120 40.0
ClCG02G001460 Citrullus lanatus HOM05D000860 ORTHO05D006064 3.3e-14 83.2 76 52.6
BcaC06g32732 Brassica carinata HOM05D000860 ORTHO05D006064 4.2e-14 82.8 120 39.2
Carub.0007s1411 Capsella rubella HOM05D000860 ORTHO05D006064 4.2e-14 82.8 81 46.9
MELO3C029958.2 Cucumis melo HOM05D000860 ORTHO05D006064 5.5e-14 82.4 76 53.9
Sp7g24690 Schrenkiella parvula HOM05D000860 ORTHO05D006064 5.5e-14 82.4 81 45.7
Ciclev10016548m.g Citrus clementina HOM05D000860 ORTHO05D006064 1.2e-13 81.3 75 50.7
Glyma.12G103300 Glycine max HOM05D000860 ORTHO05D006064 1.2e-13 81.3 123 39.0
BolC1t00273H Brassica oleracea HOM05D000860 ORTHO05D006064 1.6e-13 80.9 80 47.5
Thhalv10027187m.g Eutrema salsugineum HOM05D000860 ORTHO05D006064 1.6e-13 80.9 118 39.8
HanXRQChr12g0361971 Helianthus annuus HOM05D000860 ORTHO05D006064 1.6e-13 80.9 93 43.0
QL01p000412 Quercus lobata HOM05D000860 ORTHO05D006064 1.6e-13 80.9 94 43.6
MELO3C000084.2 Cucumis melo HOM05D000860 ORTHO05D006064 3.6e-13 79.7 76 53.9
MELO3C008658.2 Cucumis melo HOM05D000860 ORTHO05D006064 3.6e-13 79.7 76 53.9
AT2G16030 Arabidopsis thaliana HOM05D000860 ORTHO05D006064 4.7e-13 79.3 81 43.2
MELO3C025410.2 Cucumis melo HOM05D000860 ORTHO05D006064 4.7e-13 79.3 76 52.6
BcaNung00758 Brassica carinata HOM05D000860 ORTHO05D006064 6.1e-13 79.0 80 46.2
FAN09G3393 Fragaria x ananassa HOM05D000860 ORTHO05D006064 6.1e-13 79.0 77 51.9
Sed0003367 Sechium edule HOM05D000860 ORTHO05D006064 8.0e-13 78.6 75 52.0
Atru.chr6.3106 Acer truncatum HOM05D000860 ORTHO05D006064 1.0e-12 78.2 93 43.0
PSO017G4595 Papaver somniferum HOM05D000860 ORTHO05D006064 1.4e-12 77.8 93 40.9
Phvul.011G108000 Phaseolus vulgaris HOM05D000860 ORTHO05D006064 1.4e-12 77.8 82 45.1
CANSAT64G2191 Cannabis sativa HOM05D000860 ORTHO05D006064 1.8e-12 77.4 93 41.9
TAR627G1143 Trochodendron aralioides HOM05D000860 ORTHO05D006064 1.8e-12 77.4 93 38.7
Actinidia27025 Actinidia chinensis HOM05D000860 ORTHO05D006064 2.3e-12 77.0 84 44.0
Medtr4g046723 Medicago truncatula HOM05D000860 ORTHO05D006064 2.3e-12 77.0 118 39.8
Thecc.08G153000 Theobroma cacao HOM05D000860 ORTHO05D006064 2.3e-12 77.0 93 41.9
Aqoxy1G03983 Aquilegia oxysepala HOM05D000860 ORTHO05D006064 3.0e-12 76.6 93 39.8
MELO3C027253.2 Cucumis melo HOM05D000860 ORTHO05D006064 3.0e-12 76.6 77 51.9
VMungo1127G0801 Vigna mungo HOM05D000860 ORTHO05D006064 3.0e-12 76.6 82 45.1
COL.COLO4_08562 Corchorus olitorius HOM05D000860 ORTHO05D006064 4.0e-12 76.3 78 44.9
TPR.G19038 Trifolium pratense HOM05D000860 ORTHO05D006064 4.0e-12 76.3 98 41.8
Gohir.D05G244866 Gossypium hirsutum HOM05D000860 ORTHO05D006064 5.2e-12 75.9 77 46.8
Gorai.009G254500 Gossypium raimondii HOM05D000860 ORTHO05D006064 5.2e-12 75.9 77 46.8
C01p02820 Brassica napus HOM05D000860 ORTHO05D006064 6.8e-12 75.5 80 45.0
C01p02850 Brassica napus HOM05D000860 ORTHO05D006064 6.8e-12 75.5 80 45.0
EL10Ac4g09314 Beta vulgaris HOM05D000860 ORTHO05D006064 8.9e-12 75.1 76 43.4
A07p04720 Brassica napus HOM05D000860 ORTHO05D006064 8.9e-12 75.1 80 46.2
BraA07t28260Z Brassica rapa HOM05D000860 ORTHO05D006064 8.9e-12 75.1 80 46.2
Psat7g163240 Pisum sativum HOM05D000860 ORTHO05D006064 1.2e-11 74.7 80 43.8
Aa31LG5G12200 Aethionema arabicum HOM05D000860 ORTHO05D006064 2.0e-11 73.9 110 38.2
Sc12g0002490 Simmondsia chinensis HOM05D000860 ORTHO05D006064 2.0e-11 73.9 76 46.1
MELO3C000317.2 Cucumis melo HOM05D000860 ORTHO05D006064 2.6e-11 73.6 67 53.7
AUR62005104 Chenopodium quinoa HOM05D000860 ORTHO05D006064 3.4e-11 73.2 80 40.0
Gohir.A05G243700 Gossypium hirsutum HOM05D000860 ORTHO05D006064 3.4e-11 73.2 77 45.5
Nitab4.5_0000291g0080 Nicotiana tabacum HOM05D000860 ORTHO05D006064 3.4e-11 73.2 55 60.0
TWI75G0472 Tripterygium wilfordii HOM05D000860 ORTHO05D006064 3.4e-11 73.2 88 40.9
Duzib116G0686 Durio zibethinus HOM05D000860 ORTHO05D006064 7.5e-11 72.0 93 36.6
Actinidia12480 Actinidia chinensis HOM05D000860 ORTHO05D006064 1.3e-10 71.2 73 47.9
Lj3g0007411 Lotus japonicus HOM05D000860 ORTHO05D006064 1.7e-10 70.9 80 41.2
Dinv13864 Davidia involucrata HOM05D000860 ORTHO05D006064 2.2e-10 70.5 63 50.8
Medtr4g063440 Medicago truncatula HOM05D000860 ORTHO05D006064 2.2e-10 70.5 55 60.0
Rhsim06G0154700 Rhododendron simsii HOM05D000860 ORTHO05D006064 2.2e-10 70.5 72 47.2
A04p06990 Brassica napus HOM05D004336 ORTHO05D005367 2.8e-10 70.1 64 51.6
BraA04t16398Z Brassica rapa HOM05D004336 ORTHO05D005367 2.8e-10 70.1 64 51.6
AUR62000872 Chenopodium quinoa HOM05D000860 ORTHO05D006064 2.8e-10 70.1 76 40.8
ECA233G6248 Erigeron canadensis HOM05D000860 ORTHO05D006064 2.8e-10 70.1 80 41.2
AT4G26730 Arabidopsis thaliana HOM05D000860 ORTHO05D006064 3.7e-10 69.7 80 40.0
Dinv10889 Davidia involucrata HOM05D000860 ORTHO05D006064 3.7e-10 69.7 59 54.2
FAN05G2158 Fragaria x ananassa HOM05D000860 ORTHO05D006064 3.7e-10 69.7 63 52.4
MELO3C027700.2 Cucumis melo HOM05D000860 ORTHO05D006064 4.9e-10 69.3 64 53.1
GSVIVG01000419001 Vitis vinifera HOM05D000860 ORTHO05D006064 1.1e-09 68.2 73 46.6
HanXRQChr04g0110821 Helianthus annuus HOM05D000860 ORTHO05D006064 1.8e-09 67.4 69 49.3
Gorai.003G146300 Gossypium raimondii HOM05D000860 ORTHO05D006064 2.4e-09 67.0 75 42.7
MD09G1102000 Malus domestica HOM05D000860 ORTHO05D006064 2.4e-09 67.0 73 45.2
Gohir.D03G139600 Gossypium hirsutum HOM05D000860 ORTHO05D006064 3.2e-09 66.6 75 42.7
HPP92_001790 Vanilla planifolia HOM05D000860 ORTHO05D006064 1.2e-08 64.7 78 44.9
Gohir.A03G029000 Gossypium hirsutum HOM05D000860 ORTHO05D006064 1.6e-08 64.3 75 41.3
MELO3C032915.2 Cucumis melo HOM05D000860 ORTHO05D006064 4.5e-08 62.8 54 55.6
CDE02G4720 Ceratophyllum demersum HOM05D000860 ORTHO05D006064 1.3e-07 61.2 75 37.3
Hund07049 Selenicereus undatus HOM05D000860 ORTHO05D006064 1.3e-07 61.2 60 48.3
ATR0804G076 Amborella trichopoda HOM05D000860 ORTHO05D006064 5.0e-07 59.3 83 36.1
SGA_v2.0_scaffold49G18328 Striga asiatica HOM05D000860 ORTHO05D006064 1.1e-06 58.2 34 76.5
MELO3C029864.2 Cucumis melo HOM05D000860 ORTHO05D006064 2.5e-06 57.0 54 50.0
MBI02_g37279_MAGBIO Magnolia biondii HOM05D000860 ORTHO05D006064 4.3e-06 56.2 82 39.0
SHI10287 Sapria himalayana HOM05D000860 ORTHO05D006064 4.3e-06 56.2 89 34.8


User provided reference genes

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