Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G02790 Striga asiatica HOM05D006125 ORTHO05D007404 5.5e-71 270.8 130 100.0
vmacro19061 Vaccinium macrocarpon HOM05D006125 ORTHO05D007404 8.7e-16 87.4 108 44.4
SalBow7G4057 Salvia bowleyana HOM05D006125 ORTHO05D007404 1.5e-15 86.7 55 76.4
BcaC08g47537 Brassica carinata HOM05D006125 ORTHO05D007404 1.3e-14 83.6 57 68.4
A07p44800 Brassica napus HOM05D006125 ORTHO05D007404 1.3e-14 83.6 57 68.4
C06p53620 Brassica napus HOM05D006125 ORTHO05D007404 1.3e-14 83.6 57 68.4
BolC6t40378H Brassica oleracea HOM05D006125 ORTHO05D007404 1.3e-14 83.6 57 68.4
A07p26910 Brassica napus HOM05D006125 ORTHO05D007404 1.6e-14 83.2 57 68.4
Thhalv10009235m.g Eutrema salsugineum HOM05D006125 ORTHO05D007404 1.6e-14 83.2 57 68.4
Cc04_g05190 Coffea canephora HOM05D006125 ORTHO05D007404 2.1e-14 82.8 57 66.7
Aa31LG7G580 Aethionema arabicum HOM05D006125 ORTHO05D007404 4.8e-14 81.6 57 64.9
CARHR073580 Cardamine hirsuta HOM05D006125 ORTHO05D007404 4.8e-14 81.6 52 73.1
Aa31LG4G1200 Aethionema arabicum HOM05D006125 ORTHO05D007404 6.2e-14 81.3 57 64.9
CARHR016510 Cardamine hirsuta HOM05D006125 ORTHO05D007404 8.1e-14 80.9 57 64.9
BcaC08g45345 Brassica carinata HOM05D006125 ORTHO05D007404 1.1e-13 80.5 58 69.0
C06p29590 Brassica napus HOM05D006125 ORTHO05D007404 1.1e-13 80.5 58 69.0
BolC6t38124H Brassica oleracea HOM05D006125 ORTHO05D007404 1.1e-13 80.5 58 69.0
BcaB02g08714 Brassica carinata HOM05D006125 ORTHO05D007404 1.4e-13 80.1 51 68.6
BraA07t31987Z Brassica rapa HOM05D006125 ORTHO05D007404 2.4e-13 79.3 58 67.2
AL1G28160 Arabidopsis lyrata HOM05D006125 ORTHO05D007404 3.1e-13 79.0 57 57.9
BraA07t30336Z Brassica rapa HOM05D006125 ORTHO05D007404 3.1e-13 79.0 57 68.4
Migut.I00687 Erythranthe guttata HOM05D006125 ORTHO05D007404 4.0e-13 78.6 61 63.9
Sp1g14310 Schrenkiella parvula HOM05D006125 ORTHO05D007404 4.0e-13 78.6 53 69.8
Sp5g34850 Schrenkiella parvula HOM05D006125 ORTHO05D007404 4.0e-13 78.6 41 82.9
Oeu009806.1 Olea europaea HOM05D006125 ORTHO05D007404 5.3e-13 78.2 57 64.9
Rhsim08G0204300 Rhododendron simsii HOM05D006125 ORTHO05D007404 5.3e-13 78.2 54 68.5
Lj3g0014233 Lotus japonicus HOM05D006125 ORTHO05D007404 9.0e-13 77.4 57 59.6
Ciclev10026865m.g Citrus clementina HOM05D006125 ORTHO05D007404 1.2e-12 77.0 53 64.2
HanXRQChr08g0219721 Helianthus annuus HOM05D006125 ORTHO05D007404 1.2e-12 77.0 67 56.7
Dinv21417 Davidia involucrata HOM05D006125 ORTHO05D007404 2.0e-12 76.3 48 75.0
CsaV3_7G031850 Cucumis sativus L. HOM05D006125 ORTHO05D007404 2.6e-12 75.9 47 72.3
CAN.G407.2 Capsicum annuum HOM05D006125 ORTHO05D007404 3.4e-12 75.5 56 60.7
Solyc03g117580.3 Solanum lycopersicum HOM05D006125 ORTHO05D007404 3.4e-12 75.5 51 66.7
Sopen03g036490 Solanum pennellii HOM05D006125 ORTHO05D007404 3.4e-12 75.5 51 66.7
ATR0580G075 Amborella trichopoda HOM05D006125 ORTHO05D007404 4.4e-12 75.1 44 72.7
PGSC0003DMG400014151 Solanum tuberosum HOM05D006125 ORTHO05D007404 4.4e-12 75.1 51 66.7
AL2G40490 Arabidopsis lyrata HOM05D006125 ORTHO05D007404 5.8e-12 74.7 40 77.5
AT1G16000 Arabidopsis thaliana HOM05D006125 ORTHO05D007404 5.8e-12 74.7 57 59.6
Thhalv10019388m.g Eutrema salsugineum HOM05D006125 ORTHO05D007404 5.8e-12 74.7 57 64.9
AT1G80890 Arabidopsis thaliana HOM05D006125 ORTHO05D007404 7.6e-12 74.3 41 75.6
Carub.0001s1580 Capsella rubella HOM05D006125 ORTHO05D007404 7.6e-12 74.3 57 59.6
Gorai.010G136700 Gossypium raimondii HOM05D006125 ORTHO05D007404 7.6e-12 74.3 85 43.5
QL07p030560 Quercus lobata HOM05D006125 ORTHO05D007404 7.6e-12 74.3 50 68.0
HanXRQChr05g0153751 Helianthus annuus HOM05D006125 ORTHO05D007404 9.9e-12 73.9 45 68.9
Os12g0556400 Oryza sativa ssp. japonica HOM05D006125 ORTHO05D007404 9.9e-12 73.9 47 68.1
MELO3C023472.2 Cucumis melo HOM05D006125 ORTHO05D007404 1.3e-11 73.6 47 70.2
Dinv23278 Davidia involucrata HOM05D006125 ORTHO05D007404 1.3e-11 73.6 62 56.5
Thecc.06G043200 Theobroma cacao HOM05D006125 ORTHO05D007404 1.7e-11 73.2 58 56.9
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 2.2e-11 72.8 57 59.6
Gohir.D06G119100 Gossypium hirsutum HOM05D006125 ORTHO05D007404 2.2e-11 72.8 57 56.1
Actinidia25476 Actinidia chinensis HOM05D006125 ORTHO05D007404 2.9e-11 72.4 41 70.7
QL07p031505 Quercus lobata HOM05D006125 ORTHO05D007404 2.9e-11 72.4 50 66.0
unitig_62.g23831 Utricularia gibba HOM05D006125 ORTHO05D007404 2.9e-11 72.4 60 58.3
BcaB05g25217 Brassica carinata HOM05D006125 ORTHO05D007404 3.8e-11 72.0 95 48.4
DCAR_021146 Daucus carota HOM05D006125 ORTHO05D007404 3.8e-11 72.0 46 67.4
Gohir.A06G114500 Gossypium hirsutum HOM05D006125 ORTHO05D007404 3.8e-11 72.0 57 54.4
SalBow6G4114 Salvia bowleyana HOM05D006125 ORTHO05D007404 4.9e-11 71.6 56 66.1
Cpa.g.sc10.63 Carica papaya HOM05D006125 ORTHO05D007404 8.4e-11 70.9 49 63.3
Phvul.010G162500 Phaseolus vulgaris HOM05D006125 ORTHO05D007404 8.4e-11 70.9 57 56.1
Prupe.2G074900 Prunus persica HOM05D006125 ORTHO05D007404 8.4e-11 70.9 53 52.8
Nitab4.5_0002700g0200 Nicotiana tabacum HOM05D006125 ORTHO05D007404 1.1e-10 70.5 41 70.7
Nitab4.5_0009867g0040 Nicotiana tabacum HOM05D006125 ORTHO05D007404 1.1e-10 70.5 41 70.7
TPR.G3325 Trifolium pratense HOM05D006125 ORTHO05D007404 1.1e-10 70.5 57 50.9
Zm00001eb176360 Zea mays HOM05D006125 ORTHO05D007404 1.1e-10 70.5 47 63.8
CDE06G2663 Ceratophyllum demersum HOM05D006125 ORTHO05D007404 1.4e-10 70.1 45 66.7
Duzib160G0610 Durio zibethinus HOM05D006125 ORTHO05D007404 1.4e-10 70.1 49 59.2
RcHm_v2.0_Chr2g0132751 Rosa chinensis HOM05D006125 ORTHO05D007404 1.9e-10 69.7 43 62.8
CANSAT56G2558 Cannabis sativa HOM05D006125 ORTHO05D007404 2.4e-10 69.3 57 59.6
ECA246G3825 Erigeron canadensis HOM05D006125 ORTHO05D007404 2.4e-10 69.3 38 73.7
Manes.11G068700 Manihot esculenta HOM05D006125 ORTHO05D007404 2.4e-10 69.3 48 60.4
THA.LOC104808176 Tarenaya hassleriana HOM05D006125 ORTHO05D007404 2.4e-10 69.3 50 62.0
Hma1.2p1_0329F.1_g127170 Hydrangea macrophylla HOM05D006125 ORTHO05D007404 3.2e-10 68.9 43 67.4
PGR031G3360 Punica granatum HOM05D006125 ORTHO05D007404 4.2e-10 68.6 57 54.4
PGR037G0004 Punica granatum HOM05D006125 ORTHO05D007404 4.2e-10 68.6 57 54.4
TAR383G0490 Trochodendron aralioides HOM05D006125 ORTHO05D007404 4.2e-10 68.6 38 71.1
HPP92_003757 Vanilla planifolia HOM05D006125 ORTHO05D007404 4.2e-10 68.6 47 57.4
CDE03G0106 Ceratophyllum demersum HOM05D006125 ORTHO05D007404 5.4e-10 68.2 49 61.2
MD09G1225600 Malus domestica HOM05D006125 ORTHO05D007404 5.4e-10 68.2 38 68.4
COL.COLO4_26743 Corchorus olitorius HOM05D006125 ORTHO05D007404 7.1e-10 67.8 56 48.2
Eucgr.J03118 Eucalyptus grandis HOM05D006125 ORTHO05D007404 7.1e-10 67.8 45 57.8
MD17G1224400 Malus domestica HOM05D006125 ORTHO05D007404 7.1e-10 67.8 65 50.8
Peaxi162Scf00553g00539 Petunia axillaris HOM05D006125 ORTHO05D007404 7.1e-10 67.8 71 49.3
TPR.G29449 Trifolium pratense HOM05D006125 ORTHO05D007404 7.1e-10 67.8 57 50.9
CiPaw.09G167300 Carya illinoinensis HOM05D006125 ORTHO05D007404 1.2e-09 67.0 85 45.9
Ca_06644_v3 Cicer arietinum L. HOM05D006125 ORTHO05D007404 1.2e-09 67.0 58 50.0
FAN02G1155 Fragaria x ananassa HOM05D006125 ORTHO05D007404 2.1e-09 66.2 43 60.5
Glyma.07G021900 Glycine max HOM05D006125 ORTHO05D007404 2.1e-09 66.2 57 52.6
Os08g0272000 Oryza sativa ssp. japonica HOM05D006125 ORTHO05D007404 2.1e-09 66.2 47 61.7
PSO782G1324 Papaver somniferum HOM05D006125 ORTHO05D007404 2.1e-09 66.2 76 47.4
Prupe.3G100100 Prunus persica HOM05D006125 ORTHO05D007404 2.1e-09 66.2 56 53.6
QL04p040226 Quercus lobata HOM05D006125 ORTHO05D007404 2.1e-09 66.2 50 62.0
Sc12g0007910 Simmondsia chinensis HOM05D006125 ORTHO05D007404 2.1e-09 66.2 57 56.1
AUR62034053 Chenopodium quinoa HOM05D006125 ORTHO05D007404 2.7e-09 65.9 56 53.6
Actinidia18251 Actinidia chinensis HOM05D006125 ORTHO05D007404 4.6e-09 65.1 57 54.4
AUR62040628 Chenopodium quinoa HOM05D006125 ORTHO05D007404 4.6e-09 65.1 49 59.2
FAN05G4250 Fragaria x ananassa HOM05D006125 ORTHO05D007404 6.0e-09 64.7 43 58.1
CSS0032300 Camellia sinensis var. sinensis HOM05D006125 ORTHO05D007404 7.8e-09 64.3 37 64.9
ClCG09G003380 Citrullus lanatus HOM05D006125 ORTHO05D007404 7.8e-09 64.3 49 55.1
Sed0010339 Sechium edule HOM05D006125 ORTHO05D007404 7.8e-09 64.3 56 51.8
SEGI_23088 Sequoiadendron giganteum HOM05D006125 ORTHO05D007404 1.0e-08 63.9 48 56.2
Atru.chr1.2788 Acer truncatum HOM05D006125 ORTHO05D007404 1.7e-08 63.2 38 60.5
arahy.Tifrunner.gnm1.ann1.CEK6A4 Arachis hypogaea HOM05D006125 ORTHO05D007404 1.7e-08 63.2 41 61.0
arahy.Tifrunner.gnm1.ann1.P1DY4U Arachis hypogaea HOM05D006125 ORTHO05D007404 1.7e-08 63.2 41 61.0
Duzib235G1153 Durio zibethinus HOM05D006125 ORTHO05D007404 1.7e-08 63.2 37 64.9
Lalb_Chr04g0264571 Lupinus albus HOM05D006125 ORTHO05D007404 1.7e-08 63.2 57 49.1
Sed0014955 Sechium edule HOM05D006125 ORTHO05D007404 1.7e-08 63.2 37 64.9
BolC2t09694H Brassica oleracea HOM05D006125 ORTHO05D007404 2.3e-08 62.8 38 73.7
FvH4_6g28500 Fragaria vesca HOM05D006125 ORTHO05D007404 2.3e-08 62.8 49 51.0
FAN14G2502 Fragaria x ananassa HOM05D006125 ORTHO05D007404 2.3e-08 62.8 49 51.0
MBI14_g09098_MAGBIO Magnolia biondii HOM05D006125 ORTHO05D007404 2.3e-08 62.8 49 53.1
Aqoxy7G03387 Aquilegia oxysepala HOM05D006125 ORTHO05D007404 3.0e-08 62.4 50 58.0
SHI11295 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-08 62.4 53 54.7
TWI12G0957 Tripterygium wilfordii HOM05D006125 ORTHO05D007404 3.0e-08 62.4 43 55.8
EL10Ac8g19423 Beta vulgaris HOM05D006125 ORTHO05D007404 3.9e-08 62.0 40 60.0
Glyma.08G219900 Glycine max HOM05D006125 ORTHO05D007404 5.1e-08 61.6 40 57.5
Psat7g263200 Pisum sativum HOM05D006125 ORTHO05D007404 8.7e-08 60.8 50 56.0
Medtr4g007290 Medicago truncatula HOM05D006125 ORTHO05D007404 1.5e-07 60.1 42 54.8
Potri.001G043300 Populus trichocarpa HOM05D006125 ORTHO05D007404 1.5e-07 60.1 46 47.8
Potri.003G183501 Populus trichocarpa HOM05D006125 ORTHO05D007404 1.9e-07 59.7 80 37.5
GSVIVG01015983001 Vitis vinifera HOM05D006125 ORTHO05D007404 3.3e-07 58.9 33 69.7
Cfa017829 Carpinus fangiana HOM05D006125 ORTHO05D007404 4.3e-07 58.5 53 43.4
Manes.04G101402 Manihot esculenta HOM05D006125 ORTHO05D007404 5.6e-07 58.2 32 68.8
Sabra01G0029800 Salix brachista HOM05D006125 ORTHO05D007404 5.6e-07 58.2 56 42.9
Haze_20423 Corylus avellana HOM05D006125 ORTHO05D007404 1.3e-06 57.0 37 56.8
Sabra03G0134100 Salix brachista HOM05D006125 ORTHO05D007404 2.1e-06 56.2 44 47.7
BolC6t38413H Brassica oleracea HOM05D006125 ORTHO05D007404 8.1e-06 54.3 96 42.7


User provided reference genes

Program Settings