Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G02767 Striga asiatica HOM05D007813 ORTHO05D009861 7.6e-69 263.8 146 100.0
MSTRG.2075 Avicennia marina HOM05D007813 ORTHO05D009861 6.1e-34 147.9 179 52.0
Peaxi162Scf00643g00047 Petunia axillaris HOM05D007813 ORTHO05D009861 2.6e-24 115.9 148 49.3
Migut.E00672 Erythranthe guttata HOM05D007813 ORTHO05D009861 6.3e-23 111.3 129 54.3
Oeu039115.1 Olea europaea HOM05D007813 ORTHO05D009861 3.1e-22 109.0 176 43.2
Cc11_g01070 Coffea canephora HOM05D007813 ORTHO05D009861 1.2e-18 97.1 194 39.2
Sopen01g035700 Solanum pennellii HOM05D007813 ORTHO05D009861 2.1e-18 96.3 138 42.0
PGSC0003DMG400031169 Solanum tuberosum HOM05D007813 ORTHO05D009861 3.6e-18 95.5 141 44.0
Actinidia04359 Actinidia chinensis HOM05D007813 ORTHO05D009861 4.7e-18 95.1 178 43.8
Nitab4.5_0000146g0130 Nicotiana tabacum HOM05D007813 ORTHO05D009861 2.3e-17 92.8 136 46.3
DCAR_023485 Daucus carota HOM05D007813 ORTHO05D009861 3.0e-17 92.4 160 40.6
Nitab4.5_0008487g0020 Nicotiana tabacum HOM05D007813 ORTHO05D009861 3.9e-17 92.0 139 50.4
Aa31LG4G9500 Aethionema arabicum HOM05D007813 ORTHO05D009861 5.2e-17 91.7 132 43.9
Cpa.g.sc30.28 Carica papaya HOM05D007813 ORTHO05D009861 5.2e-17 91.7 154 44.2
Sc06g0009980 Simmondsia chinensis HOM05D007813 ORTHO05D009861 6.7e-17 91.3 149 42.3
Nitab4.5_0006894g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 1.1e-16 90.5 139 46.8
Carub.0007s1668 Capsella rubella HOM05D007813 ORTHO05D009861 1.5e-16 90.1 142 42.3
CARHR231780 Cardamine hirsuta HOM05D007813 ORTHO05D009861 2.0e-16 89.7 140 45.0
Nitab4.5_0003448g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 2.6e-16 89.4 139 49.6
TWI53G2082 Tripterygium wilfordii HOM05D007813 ORTHO05D009861 5.7e-16 88.2 164 39.0
Nn3g16575 Nelumbo nucifera HOM05D007813 ORTHO05D009861 9.7e-16 87.4 155 41.9
AT4G24370 Arabidopsis thaliana HOM05D007813 ORTHO05D009861 2.2e-15 86.3 151 43.0
Ah.01g003370 Amaranthus hybridus HOM05D007813 ORTHO05D009861 2.8e-15 85.9 162 42.6
Thhalv10026382m.g Eutrema salsugineum HOM05D007813 ORTHO05D009861 2.8e-15 85.9 145 40.7
Solyc01g089857.1 Solanum lycopersicum HOM05D007813 ORTHO05D009861 2.8e-15 85.9 96 49.0
BraA01t01511Z Brassica rapa HOM05D007813 ORTHO05D009861 3.7e-15 85.5 143 44.1
HanXRQChr11g0332791 Helianthus annuus HOM05D007813 ORTHO05D009861 3.7e-15 85.5 142 40.1
Nitab4.5_0001077g0010 Nicotiana tabacum HOM05D007813 ORTHO05D009861 4.8e-15 85.1 129 43.4
C01p19700 Brassica napus HOM05D007813 ORTHO05D009861 8.2e-15 84.3 143 43.4
BolC1t01897H Brassica oleracea HOM05D007813 ORTHO05D009861 8.2e-15 84.3 143 43.4
A01p15750 Brassica napus HOM05D007813 ORTHO05D009861 2.4e-14 82.8 142 43.7
Lj9P278T15 Lonicera japonica HOM05D007813 ORTHO05D009861 2.4e-14 82.8 149 36.9
Sp7g22350 Schrenkiella parvula HOM05D007813 ORTHO05D009861 2.4e-14 82.8 148 45.3
AL7G28850 Arabidopsis lyrata HOM05D007813 ORTHO05D009861 3.1e-14 82.4 144 40.3
EL10Ac9g22652 Beta vulgaris HOM05D000001 ORTHO05D000003 4.1e-14 82.0 167 38.9
CsaV3_5G021820 Cucumis sativus L. HOM05D007813 ORTHO05D009861 4.1e-14 82.0 146 40.4
Manes.11G001000 Manihot esculenta HOM05D007813 ORTHO05D009861 4.1e-14 82.0 135 42.2
Hund21950 Selenicereus undatus HOM05D007813 ORTHO05D009861 5.3e-14 81.6 164 39.0
COL.COLO4_33123 Corchorus olitorius HOM05D007813 ORTHO05D009861 1.2e-13 80.5 168 36.3
Dinv01363 Davidia involucrata HOM05D007813 ORTHO05D009861 1.2e-13 80.5 134 41.8
Atru.chr11.1262 Acer truncatum HOM05D007813 ORTHO05D009861 1.6e-13 80.1 153 37.9
RhsimUnG0102800 Rhododendron simsii HOM05D007813 ORTHO05D009861 1.6e-13 80.1 144 42.4
unitig_699.g19640 Utricularia gibba HOM05D007813 ORTHO05D009861 2.0e-13 79.7 143 43.4
QL01p000818 Quercus lobata HOM05D007813 ORTHO05D009861 2.6e-13 79.3 133 46.6
Aqoxy7G00887 Aquilegia oxysepala HOM05D007813 ORTHO05D009861 3.5e-13 79.0 156 36.5
ClCG01G008030 Citrullus lanatus HOM05D007813 ORTHO05D009861 4.5e-13 78.6 155 40.0
Sabra07G0000100 Salix brachista HOM05D007813 ORTHO05D009861 4.5e-13 78.6 157 39.5
Lj2g0017100 Lotus japonicus HOM05D007813 ORTHO05D009861 1.0e-12 77.4 124 46.0
Duzib248G1033 Durio zibethinus HOM05D007813 ORTHO05D009861 2.9e-12 75.9 170 35.9
ECA233G3331 Erigeron canadensis HOM05D007813 ORTHO05D009861 5.0e-12 75.1 147 37.4
Psat4g167360 Pisum sativum HOM05D007813 ORTHO05D009861 5.0e-12 75.1 150 39.3
TAR374G1573 Trochodendron aralioides HOM05D007813 ORTHO05D009861 8.5e-12 74.3 164 39.6
Sed0004061 Sechium edule HOM05D007813 ORTHO05D009861 1.1e-11 73.9 159 35.2
Thecc.02G153800 Theobroma cacao HOM05D007813 ORTHO05D009861 1.1e-11 73.9 171 37.4
Haze_17409 Corylus avellana HOM05D001339 ORTHO05D003609 1.5e-11 73.6 132 41.7
MELO3C005074.2 Cucumis melo HOM05D007813 ORTHO05D009861 1.5e-11 73.6 156 36.5
Lsat_1_v5_gn_6_66140 Lactuca sativa HOM05D007813 ORTHO05D009861 1.5e-11 73.6 164 37.8
Ciclev10032850m.g Citrus clementina HOM05D007813 ORTHO05D009861 5.5e-11 71.6 159 35.2
FvH4_4g37240 Fragaria vesca HOM05D007813 ORTHO05D009861 1.6e-10 70.1 148 37.8
Nitab4.5_0004221g0010 Nicotiana tabacum HOM05D007813 ORTHO05D009861 1.6e-10 70.1 122 42.6
Prupe.1G350000 Prunus persica HOM05D007813 ORTHO05D009861 2.7e-10 69.3 153 37.9
FAN07G2714 Fragaria x ananassa HOM05D007813 ORTHO05D009861 6.1e-10 68.2 145 35.9
CDE02G1922 Ceratophyllum demersum HOM05D000644 ORTHO05D000504 8.0e-10 67.8 173 34.7
AUR62014985 Chenopodium quinoa HOM05D007813 ORTHO05D009861 1.0e-09 67.4 96 45.8
Gohir.D02G190500 Gossypium hirsutum HOM05D007813 ORTHO05D009861 1.0e-09 67.4 186 33.3
Gorai.005G213200 Gossypium raimondii HOM05D007813 ORTHO05D009861 1.0e-09 67.4 186 33.3
Gohir.A03G167400 Gossypium hirsutum HOM05D007813 ORTHO05D009861 1.4e-09 67.0 186 32.8
AUR62029135 Chenopodium quinoa HOM05D007813 ORTHO05D009861 1.8e-09 66.6 96 44.8
CANSAT78G1292 Cannabis sativa HOM05D007813 ORTHO05D009861 2.3e-09 66.2 160 36.9
FAN17G2972 Fragaria x ananassa HOM05D007813 ORTHO05D009861 5.2e-09 65.1 146 37.0
MD13G1002400 Malus domestica HOM05D007813 ORTHO05D009861 1.2e-08 63.9 143 37.1
CiPaw.16G001800 Carya illinoinensis HOM05D007813 ORTHO05D009861 2.0e-08 63.2 143 37.8
RcHm_v2.0_Chr4g0447031 Rosa chinensis HOM05D007813 ORTHO05D009861 2.0e-08 63.2 152 35.5
Lalb_Chr04g0259041 Lupinus albus HOM05D007813 ORTHO05D009861 2.6e-08 62.8 145 33.1
PSO675G5803 Papaver somniferum HOM05D007813 ORTHO05D009861 2.6e-08 62.8 157 36.3
BcaC09g50873 Brassica carinata HOM05D007813 ORTHO05D009861 3.3e-08 62.4 127 37.0
Lju470C5T0 Lonicera japonica HOM05D007813 ORTHO05D009861 7.5e-08 61.2 148 31.8
HPP92_002530 Vanilla planifolia HOM05D007813 ORTHO05D009861 3.7e-07 58.9 154 35.1
PSO717G0067 Papaver somniferum HOM05D007813 ORTHO05D009861 6.3e-07 58.2 150 35.3
Medtr8g022020 Medicago truncatula HOM05D007813 ORTHO05D009861 8.2e-07 57.8 144 36.1
Ca_23410_v3 Cicer arietinum L. HOM05D007813 ORTHO05D009861 1.1e-06 57.4 125 33.6
Glyma.09G285400 Glycine max HOM05D007813 ORTHO05D009861 2.4e-06 56.2 146 36.3


User provided reference genes

Program Settings