Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G02740 Striga asiatica HOM05D000611 ORTHO05D401598 0.0e+00 1591.6 754 100.0
SGA_v2.0_scaffold31G12798 Striga asiatica HOM05D000611 ORTHO05D000809 7.0e-09 67.0 99 38.4
SGA_v2.0_scaffold112G31647 Striga asiatica HOM05D000611 ORTHO05D000809 4.6e-08 64.3 44 63.6
SalBow3G0482 Salvia bowleyana HOM05D000611 ORTHO05D000809 1.0e-07 63.2 44 63.6
MSTRG.19353 Avicennia marina HOM05D000611 ORTHO05D000809 3.0e-07 61.6 37 73.0
ECA240G2968 Erigeron canadensis HOM05D000611 ORTHO05D000809 8.6e-07 60.1 146 29.5
MBI11_g45238_MAGBIO Magnolia biondii HOM05D000611 ORTHO05D000809 1.1e-06 59.7 51 47.1
Oeu029558.1 Olea europaea HOM05D000611 ORTHO05D000809 1.1e-06 59.7 44 56.8
Cc06_g07300 Coffea canephora HOM05D000611 ORTHO05D000809 1.9e-06 58.9 102 39.2
Gohir.D07G118900 Gossypium hirsutum HOM05D000611 ORTHO05D000809 1.9e-06 58.9 47 55.3
Gorai.001G127900 Gossypium raimondii HOM05D000611 ORTHO05D000809 1.9e-06 58.9 47 55.3
MD11G1178800 Malus domestica HOM05D000611 ORTHO05D000809 1.9e-06 58.9 38 63.2
Cfa008667 Carpinus fangiana HOM05D000611 ORTHO05D000809 3.3e-06 58.2 94 35.1
RcHm_v2.0_Chr5g0049631 Rosa chinensis HOM05D000611 ORTHO05D000809 3.3e-06 58.2 44 54.5
Duzib168G2209 Durio zibethinus HOM05D000611 ORTHO05D000809 4.3e-06 57.8 51 51.0
FvH4_3g27052 Fragaria vesca HOM05D000611 ORTHO05D000809 4.3e-06 57.8 93 36.6
Nn6g32381 Nelumbo nucifera HOM05D000611 ORTHO05D000809 4.3e-06 57.8 47 53.2
Oeu032079.1 Olea europaea HOM05D000700 ORTHO05D000397 4.3e-06 57.8 51 49.0
Psat5g109080 Pisum sativum HOM05D000611 ORTHO05D000809 4.3e-06 57.8 98 32.7
Thecc.05G244900 Theobroma cacao HOM05D000611 ORTHO05D000809 5.6e-06 57.4 51 49.0
Rhsim01G0197600 Rhododendron simsii HOM05D000611 ORTHO05D000809 7.3e-06 57.0 51 49.0
Thecc.09G265700 Theobroma cacao HOM05D000611 ORTHO05D000809 7.3e-06 57.0 51 49.0


User provided reference genes

Program Settings