Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G02704 Striga asiatica HOM05D002526 ORTHO05D010157 5.0e-154 547.7 277 100.0
SalBow2G1951 Salvia bowleyana HOM05D002526 ORTHO05D010157 3.1e-87 325.9 269 65.8
Migut.I00757 Erythranthe guttata HOM05D002526 ORTHO05D010157 5.4e-84 315.1 276 63.0
Dinv30612 Davidia involucrata HOM05D002526 ORTHO05D004039 1.0e-74 284.3 269 57.2
CAN.G407.78 Capsicum annuum HOM05D002526 ORTHO05D000105 1.5e-73 280.4 272 56.2
Hma1.2p1_0242F.1_g100630 Hydrangea macrophylla HOM05D002526 ORTHO05D010157 4.8e-72 275.4 291 54.3
CSS0025449 Camellia sinensis var. sinensis HOM05D002526 ORTHO05D004039 6.2e-72 275.0 265 56.6
Nitab4.5_0003463g0050 Nicotiana tabacum HOM05D001442 ORTHO05D001369 4.5e-70 268.9 249 57.4
Peaxi162Scf00332g00625 Petunia axillaris HOM05D002526 ORTHO05D010157 3.8e-69 265.8 300 52.0
TWI18G0347 Tripterygium wilfordii HOM05D002526 ORTHO05D010157 4.9e-69 265.4 261 53.3
Solyc03g116770.3 Solanum lycopersicum HOM05D002526 ORTHO05D010157 8.4e-69 264.6 272 54.4
Sopen03g035690 Solanum pennellii HOM05D002526 ORTHO05D010157 1.1e-68 264.2 297 50.2
Nitab4.5_0008560g0050 Nicotiana tabacum HOM05D001442 ORTHO05D010157 5.5e-68 261.9 262 55.3
Actinidia15756 Actinidia chinensis HOM05D002526 ORTHO05D010157 3.5e-67 259.2 288 52.1
vmacro19003 Vaccinium macrocarpon HOM05D002526 ORTHO05D010157 3.5e-67 259.2 263 57.0
PGSC0003DMG400000622 Solanum tuberosum HOM05D002526 ORTHO05D010157 4.6e-67 258.8 272 54.0
CiPaw.01G248800 Carya illinoinensis HOM05D002526 ORTHO05D004039 8.2e-64 248.1 272 52.2
Nn2g12105 Nelumbo nucifera HOM05D002526 ORTHO05D010157 1.8e-63 246.9 279 52.7
CANSAT56G1960 Cannabis sativa HOM05D002526 ORTHO05D010157 1.5e-62 243.8 265 51.3
Cc04_g04450 Coffea canephora HOM05D002526 ORTHO05D010157 2.6e-62 243.0 273 51.6
Hund00650 Selenicereus undatus HOM05D002526 ORTHO05D010157 3.4e-62 242.7 228 57.9
Haze_16568 Corylus avellana HOM05D002526 ORTHO05D004039 4.5e-62 242.3 287 49.5
Lj5A73G68 Lonicera japonica HOM05D002526 ORTHO05D010157 4.5e-62 242.3 264 52.3
Manes.04G112150 Manihot esculenta HOM05D002526 ORTHO05D004039 4.5e-62 242.3 241 55.6
Hund00651 Selenicereus undatus HOM05D002526 ORTHO05D010157 1.0e-61 241.1 227 57.7
RcHm_v2.0_Chr2g0135091 Rosa chinensis HOM05D002526 ORTHO05D010157 1.9e-60 236.9 272 50.0
Prupe.3G088600 Prunus persica HOM05D002526 ORTHO05D010157 4.6e-59 232.3 297 46.8
Oeu045127.1 Olea europaea HOM05D002526 ORTHO05D010157 6.1e-59 231.9 210 61.4
FvH4_6g29541 Fragaria vesca HOM05D002526 ORTHO05D010157 7.9e-59 231.5 226 54.0
FAN14G4319 Fragaria x ananassa HOM05D002526 ORTHO05D010157 7.9e-59 231.5 226 54.0
QL03p020400 Quercus lobata HOM05D002526 ORTHO05D010157 7.9e-59 231.5 241 52.3
QL05p030835 Quercus lobata HOM05D002526 ORTHO05D010157 7.9e-59 231.5 241 52.3
GSVIVG01017348001 Vitis vinifera HOM05D002526 ORTHO05D004039 1.8e-58 230.3 230 53.5
MD17G1213300 Malus domestica HOM05D002526 ORTHO05D010157 3.0e-58 229.6 272 50.0
Atru.chr1.2906 Acer truncatum HOM05D002526 ORTHO05D010157 5.1e-58 228.8 260 51.2
Duzib192G0551 Durio zibethinus HOM05D002526 ORTHO05D010157 5.1e-58 228.8 223 56.5
Potri.001G202300 Populus trichocarpa HOM05D002526 ORTHO05D010157 8.7e-58 228.0 239 51.9
Thecc.06G028700 Theobroma cacao HOM05D002526 ORTHO05D010157 4.3e-57 225.7 220 56.8
Ciclev10024867m.g Citrus clementina HOM05D002526 ORTHO05D004039 5.7e-57 225.3 238 51.7
COL.COLO4_11933 Corchorus olitorius HOM05D002526 ORTHO05D004039 5.7e-57 225.3 273 49.8
Gohir.A05G122650 Gossypium hirsutum HOM05D002526 ORTHO05D010157 4.5e-54 215.7 219 53.9
Thhalv10008365m.g Eutrema salsugineum HOM05D002526 ORTHO05D010157 5.9e-54 215.3 243 50.2
Gorai.009G127500 Gossypium raimondii HOM05D002526 ORTHO05D010157 7.7e-54 214.9 219 53.9
Sp1g13640 Schrenkiella parvula HOM05D002526 ORTHO05D010157 8.5e-53 211.5 236 52.1
AL1G27410 Arabidopsis lyrata HOM05D002526 ORTHO05D010157 1.4e-52 210.7 217 52.5
Carub.0001s1507 Capsella rubella HOM05D002526 ORTHO05D010157 1.9e-52 210.3 217 52.5
Aa31LG7G90 Aethionema arabicum HOM05D002526 ORTHO05D010157 9.4e-52 208.0 228 50.0
Actinidia01740 Actinidia chinensis HOM05D002526 ORTHO05D010157 1.6e-51 207.2 264 51.5
Lsat_1_v5_gn_4_88500 Lactuca sativa HOM05D002526 ORTHO05D010157 2.1e-51 206.8 256 47.7
Aqoxy7G03644 Aquilegia oxysepala HOM05D002526 ORTHO05D010157 2.7e-51 206.5 266 45.9
A06p11330 Brassica napus HOM05D002526 ORTHO05D010157 7.9e-51 204.9 227 52.4
CARHR015850 Cardamine hirsuta HOM05D002526 ORTHO05D010157 1.0e-50 204.5 230 49.1
BraA06t24312Z Brassica rapa HOM05D002526 ORTHO05D010157 1.4e-50 204.1 238 51.7
AUR62016503 Chenopodium quinoa HOM05D002526 ORTHO05D010157 1.4e-50 204.1 215 52.1
BolC5t30082H Brassica oleracea HOM05D002526 ORTHO05D010157 2.3e-50 203.4 212 53.3
AUR62011678 Chenopodium quinoa HOM05D002526 ORTHO05D010157 3.0e-50 203.0 215 52.1
AT1G15320 Arabidopsis thaliana HOM05D002526 ORTHO05D010157 4.3e-49 199.1 217 50.7
THA.LOC104812514 Tarenaya hassleriana HOM05D002526 ORTHO05D010157 7.4e-49 198.4 217 51.6
EL10Ac9g22041 Beta vulgaris HOM05D002526 ORTHO05D010157 3.7e-48 196.1 292 43.2
ECA232G1362 Erigeron canadensis HOM05D002526 ORTHO05D010157 4.8e-48 195.7 239 47.7
Sc15g0001450 Simmondsia chinensis HOM05D002526 ORTHO05D010157 3.1e-47 193.0 235 46.4
FAN02G2169 Fragaria x ananassa HOM05D002526 ORTHO05D010157 2.2e-45 186.8 173 54.9
BcaC05g25469 Brassica carinata HOM05D002526 ORTHO05D010157 8.5e-45 184.9 211 49.3
PGR102G2637 Punica granatum HOM05D002526 ORTHO05D010157 1.0e-42 177.9 227 44.5
DCAR_025516 Daucus carota HOM05D002526 ORTHO05D004039 5.2e-42 175.6 242 43.8
Gohir.D05G123550 Gossypium hirsutum HOM05D002526 ORTHO05D010157 1.1e-39 167.9 174 53.4
C05p13450 Brassica napus HOM05D002526 ORTHO05D010157 1.4e-39 167.5 184 54.3
unitig_0.g1112 Utricularia gibba HOM05D002081 ORTHO05D002088 4.1e-39 166.0 210 45.2
PSO161G0040 Papaver somniferum HOM05D002526 ORTHO05D010157 2.6e-38 163.3 215 45.6
Ah.01g021710 Amaranthus hybridus HOM05D002526 ORTHO05D010157 2.2e-37 160.2 177 50.8
Cpa.g.sc938.3 Carica papaya HOM05D002526 ORTHO05D010157 1.1e-28 131.3 202 43.6
FAN02G0105 Fragaria x ananassa HOM05D002526 ORTHO05D010157 3.6e-27 126.3 116 59.5
BcaC03g16017 Brassica carinata HOM05D002526 ORTHO05D010157 3.6e-19 99.8 83 53.0
BcaC01g00573 Brassica carinata HOM05D002526 ORTHO05D010157 5.2e-18 95.9 83 53.0
SEGI_27567 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 4.9e-16 89.4 198 28.8
SEGI_30845 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 8.3e-16 88.6 198 29.3
BcaC02g09864 Brassica carinata HOM05D002526 ORTHO05D010157 4.3e-12 76.3 69 50.7
C04p35770 Brassica napus HOM05D002526 ORTHO05D010157 4.3e-12 76.3 69 50.7
BolC2t09789H Brassica oleracea HOM05D002526 ORTHO05D010157 4.3e-12 76.3 69 50.7
BolC4t25223H Brassica oleracea HOM05D002526 ORTHO05D010157 4.3e-12 76.3 69 50.7
C02p37700 Brassica napus HOM05D002526 ORTHO05D010157 1.2e-11 74.7 69 49.3
C09p66980 Brassica napus HOM05D002526 ORTHO05D010157 2.1e-11 73.9 196 28.1
C03p81490 Brassica napus HOM05D002526 ORTHO05D010157 5.2e-10 69.3 69 47.8
BolC3t20420H Brassica oleracea HOM05D002526 ORTHO05D010157 5.2e-10 69.3 69 47.8
Zm00001eb123660 Zea mays HOM05D000828 ORTHO05D000623 1.2e-06 58.2 251 26.7


User provided reference genes

Program Settings