Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 8.9e-176 620.2 311 100.0
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 5.7e-106 388.3 323 63.8
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 7.9e-100 367.9 325 61.5
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 2.5e-93 346.3 320 58.4
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 2.6e-87 326.2 317 55.5
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 2.9e-86 322.8 273 61.2
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 4.2e-85 318.9 254 62.6
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 9.4e-85 317.8 269 60.2
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 4.7e-84 315.5 242 64.5
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 6.1e-84 315.1 246 65.4
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 2.3e-83 313.2 229 64.6
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 6.8e-83 311.6 256 59.4
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 8.8e-83 311.2 256 59.4
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 2.0e-82 310.1 226 66.4
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 2.2e-81 306.6 229 64.2
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 2.8e-81 306.2 305 54.8
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 6.3e-81 305.1 314 53.2
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 8.3e-81 304.7 315 51.7
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 8.3e-81 304.7 229 62.0
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 1.1e-80 304.3 252 59.5
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 1.1e-80 304.3 285 55.4
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 2.4e-80 303.1 278 55.0
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 4.1e-80 302.4 264 58.0
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 5.3e-80 302.0 264 57.6
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 5.3e-80 302.0 264 57.6
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 5.3e-80 302.0 252 59.1
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 7.0e-80 301.6 305 54.4
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 7.0e-80 301.6 292 54.1
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 1.2e-79 300.8 229 61.1
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 1.6e-79 300.4 286 53.5
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 7.7e-79 298.1 253 57.7
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 7.7e-79 298.1 282 55.3
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 1.3e-78 297.4 254 59.4
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.2e-78 296.6 226 61.1
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 2.2e-78 296.6 252 58.3
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 2.2e-78 296.6 252 57.9
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 2.2e-78 296.6 252 57.9
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 5.0e-78 295.4 251 57.4
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 5.0e-78 295.4 251 57.4
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 6.5e-78 295.0 282 54.6
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 6.5e-78 295.0 277 53.8
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 8.5e-78 294.7 268 55.2
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 1.1e-77 294.3 273 53.5
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 1.1e-77 294.3 252 59.5
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 1.5e-77 293.9 233 63.5
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 1.5e-77 293.9 225 61.8
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 2.5e-77 293.1 282 54.3
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 2.5e-77 293.1 313 49.8
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 3.2e-77 292.7 254 58.3
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 4.2e-77 292.4 234 59.4
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 4.2e-77 292.4 275 53.1
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 5.5e-77 292.0 271 55.0
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 2.1e-76 290.0 225 60.4
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 2.7e-76 289.7 253 57.3
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 2.7e-76 289.7 318 50.3
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 3.6e-76 289.3 257 57.2
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 6.1e-76 288.5 229 60.7
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 8.0e-76 288.1 253 55.7
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 1.0e-75 287.7 302 52.0
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 1.4e-75 287.3 268 54.1
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 2.3e-75 286.6 234 58.1
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 2.3e-75 286.6 266 53.8
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 3.0e-75 286.2 253 57.7
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 3.0e-75 286.2 270 56.7
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 3.0e-75 286.2 244 56.6
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 4.0e-75 285.8 272 52.9
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 6.8e-75 285.0 289 50.2
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 8.8e-75 284.6 261 54.0
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 8.8e-75 284.6 228 60.1
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 1.2e-74 284.3 235 57.0
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.2e-74 284.3 248 56.5
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 1.5e-74 283.9 278 52.2
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 2.6e-74 283.1 245 55.1
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 2.6e-74 283.1 255 54.1
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 2.6e-74 283.1 268 53.4
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 3.4e-74 282.7 251 55.0
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 7.5e-74 281.6 263 55.5
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 9.8e-74 281.2 311 48.2
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 9.8e-74 281.2 268 56.0
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 1.7e-73 280.4 276 52.2
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.2e-73 280.0 248 55.6
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 2.2e-73 280.0 248 55.2
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 4.9e-73 278.9 225 59.6
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 4.9e-73 278.9 270 54.4
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 4.9e-73 278.9 258 55.8
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 6.3e-73 278.5 244 55.7
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 2.4e-72 276.6 248 54.0
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 6.6e-70 268.5 324 47.5
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 9.5e-69 264.6 228 54.8
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 2.8e-68 263.1 290 50.3
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 3.6e-68 262.7 220 59.5
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 4.0e-67 259.2 255 52.5
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 1.2e-66 257.7 254 49.2
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 5.7e-66 255.4 253 54.5
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 6.3e-65 251.9 263 47.5
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 2.0e-63 246.9 335 43.6
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 1.6e-60 237.3 247 49.8
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 3.6e-60 236.1 234 52.1
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 1.8e-59 233.8 198 57.6
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 9.5e-53 211.5 264 48.5
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 1.1e-51 208.0 159 61.0
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 1.1e-51 208.0 213 51.6
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 1.4e-51 207.6 165 64.2
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 6.6e-46 188.7 227 46.3
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 2.5e-45 186.8 158 58.9
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 5.6e-45 185.7 267 42.7
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 7.3e-45 185.3 243 41.6
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 2.9e-41 173.3 143 59.4
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 1.4e-40 171.0 253 38.7
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 2.4e-40 170.2 268 37.7
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 6.0e-39 165.6 142 58.5
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 3.0e-38 163.3 137 56.9
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 5.1e-38 162.5 138 56.5
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 2.0e-34 150.6 130 53.8
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.4e-32 143.7 141 51.8
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 6.0e-31 139.0 110 63.6
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.1e-29 134.8 116 60.3
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 4.3e-29 132.9 115 57.4
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 4.3e-29 132.9 137 51.1
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 5.6e-29 132.5 145 49.0
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 1.3e-28 131.3 138 44.9
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 8.1e-20 102.1 177 37.9
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.1e-13 81.6 64 57.8
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 3.7e-12 76.6 74 54.1
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 4.0e-11 73.2 74 52.7


User provided reference genes

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