Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G02657 Striga asiatica HOM05D003948 ORTHO05D004610 3.3e-203 711.4 349 100.0
MSTRG.11117 Avicennia marina HOM05D003948 ORTHO05D004610 4.1e-105 385.6 322 62.7
SalBow2G2418 Salvia bowleyana HOM05D003948 ORTHO05D004610 1.9e-97 360.1 313 61.0
Migut.D01056 Erythranthe guttata HOM05D003948 ORTHO05D004610 1.1e-89 334.3 327 55.0
Dinv30573 Davidia involucrata HOM05D003948 ORTHO05D004610 5.6e-86 322.0 329 52.0
CAN.G407.106 Capsicum annuum HOM05D003948 ORTHO05D004610 2.1e-85 320.1 330 53.3
COL.COLO4_12905 Corchorus olitorius HOM05D003948 ORTHO05D004610 1.5e-83 313.9 313 53.7
Hma1.2p1_0317F.1_g123650 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 2.0e-83 313.5 327 51.7
TAR625G1371 Trochodendron aralioides HOM05D003948 ORTHO05D004610 2.6e-83 313.2 331 50.5
Actinidia01766 Actinidia chinensis HOM05D003948 ORTHO05D004610 9.9e-83 311.2 330 49.4
Actinidia15794 Actinidia chinensis HOM05D003948 ORTHO05D004610 2.2e-82 310.1 324 51.2
CiPaw.01G244700 Carya illinoinensis HOM05D003948 ORTHO05D004610 3.8e-82 309.3 252 62.7
MBI04_g24205_MAGBIO Magnolia biondii HOM05D003948 ORTHO05D004610 3.8e-82 309.3 254 61.4
FAN05G4627 Fragaria x ananassa HOM05D003948 ORTHO05D004610 8.4e-82 308.1 259 59.8
FAN14G0295 Fragaria x ananassa HOM05D003948 ORTHO05D004610 8.4e-82 308.1 259 59.8
Sopen03g035350 Solanum pennellii HOM05D003948 ORTHO05D004610 8.4e-82 308.1 331 51.4
Potri.003G061800 Populus trichocarpa HOM05D003948 ORTHO05D004610 2.4e-81 306.6 327 50.2
PGSC0003DMG402000630 Solanum tuberosum HOM05D003948 ORTHO05D004610 2.4e-81 306.6 327 52.3
Glyma.13G363700 Glycine max HOM05D003948 ORTHO05D004610 3.2e-81 306.2 259 57.5
FAN02G3756 Fragaria x ananassa HOM05D003948 ORTHO05D004610 4.2e-81 305.8 259 59.5
VMungo1080G0933 Vigna mungo HOM05D003948 ORTHO05D004610 4.2e-81 305.8 262 57.3
Nitab4.5_0002257g0010 Nicotiana tabacum HOM05D003948 ORTHO05D004610 5.4e-81 305.4 329 51.1
Nitab4.5_0006574g0020 Nicotiana tabacum HOM05D003948 ORTHO05D004610 5.4e-81 305.4 255 60.8
Manes.11G053200 Manihot esculenta HOM05D003948 ORTHO05D004610 7.1e-81 305.1 325 48.9
Peaxi162Scf00274g00859 Petunia axillaris HOM05D003948 ORTHO05D004610 7.1e-81 305.1 255 60.8
Glyma.15G010100 Glycine max HOM05D003948 ORTHO05D004610 1.6e-80 303.9 260 57.7
Solyc03g116460.4 Solanum lycopersicum HOM05D003948 ORTHO05D004610 2.1e-80 303.5 337 51.3
TPR.G37189 Trifolium pratense HOM05D003948 ORTHO05D004610 2.1e-80 303.5 258 58.9
EL10Ac9g21937 Beta vulgaris HOM05D003948 ORTHO05D004610 2.7e-80 303.1 329 50.8
MELO3C017899.2 Cucumis melo HOM05D003948 ORTHO05D004610 3.5e-80 302.8 253 59.7
Gohir.D05G126200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 6.0e-80 302.0 296 54.4
Gorai.009G130200 Gossypium raimondii HOM05D003948 ORTHO05D004610 6.0e-80 302.0 296 53.7
Lj3g0025185 Lotus japonicus HOM05D003948 ORTHO05D004610 6.0e-80 302.0 257 58.4
Medtr2g103300 Medicago truncatula HOM05D003948 ORTHO05D004610 7.8e-80 301.6 308 52.3
GSVIVG01017270001 Vitis vinifera HOM05D003948 ORTHO05D004610 7.8e-80 301.6 254 60.6
Sabra03G0035900 Salix brachista HOM05D003948 ORTHO05D004610 1.0e-79 301.2 327 48.9
Lalb_Chr22g0351001 Lupinus albus HOM05D003948 ORTHO05D004610 1.3e-79 300.8 263 56.3
CsaV3_4G001410 Cucumis sativus L. HOM05D003948 ORTHO05D004610 1.7e-79 300.4 253 59.3
Gohir.A05G125200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 3.9e-79 299.3 300 53.0
Cpa.g.sc10.224 Carica papaya HOM05D003948 ORTHO05D004610 5.1e-79 298.9 253 59.7
Ciclev10026043m.g Citrus clementina HOM05D003948 ORTHO05D004610 5.1e-79 298.9 303 53.1
Cc04_g04060 Coffea canephora HOM05D003948 ORTHO05D004610 5.1e-79 298.9 324 49.7
Cfa002007 Carpinus fangiana HOM05D003948 ORTHO05D004610 6.6e-79 298.5 323 51.4
ClCG07G012790 Citrullus lanatus HOM05D003948 ORTHO05D004610 8.7e-79 298.1 253 59.3
vmacro18966 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 8.7e-79 298.1 344 48.0
AUR62011555 Chenopodium quinoa HOM05D003948 ORTHO05D004610 1.9e-78 297.0 329 49.2
Prupe.3G081000 Prunus persica HOM05D003948 ORTHO05D004610 1.9e-78 297.0 249 60.6
AUR62016374 Chenopodium quinoa HOM05D003948 ORTHO05D004610 4.3e-78 295.8 329 49.2
RcHm_v2.0_Chr2g0136511 Rosa chinensis HOM05D003948 ORTHO05D004610 5.6e-78 295.4 294 54.4
Eucgr.J03052 Eucalyptus grandis HOM05D003948 ORTHO05D004610 7.3e-78 295.0 328 49.4
Psat5g301000 Pisum sativum HOM05D003948 ORTHO05D004610 7.3e-78 295.0 257 57.6
CANSAT56G2529 Cannabis sativa HOM05D003948 ORTHO05D004610 1.3e-77 294.3 252 59.1
Dinv41531 Davidia involucrata HOM05D003948 ORTHO05D004610 3.6e-77 292.7 296 52.0
Ca_01082_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 4.8e-77 292.4 275 54.2
Lsat_1_v5_gn_4_105880 Lactuca sativa HOM05D003948 ORTHO05D004610 4.8e-77 292.4 250 56.8
Sed0014623 Sechium edule HOM05D003948 ORTHO05D004610 4.8e-77 292.4 317 49.5
Gorai.011G081300 Gossypium raimondii HOM05D003948 ORTHO05D004610 6.2e-77 292.0 249 59.8
Haze_16515 Corylus avellana HOM05D003948 ORTHO05D004610 2.4e-76 290.0 323 50.5
Lj3g0004615 Lotus japonicus HOM05D003948 ORTHO05D004610 2.4e-76 290.0 254 57.9
Gohir.A10G076166 Gossypium hirsutum HOM05D003948 ORTHO05D004610 3.1e-76 289.7 312 50.3
Nn8g39388 Nelumbo nucifera HOM05D003948 ORTHO05D004610 3.1e-76 289.7 259 57.9
Ah.01g011210 Amaranthus hybridus HOM05D003948 ORTHO05D004610 4.0e-76 289.3 325 48.9
SalBow2G0819 Salvia bowleyana HOM05D003948 ORTHO05D004610 9.0e-76 288.1 292 52.7
Dinv36546 Davidia involucrata HOM05D003948 ORTHO05D004610 2.0e-75 287.0 256 55.9
arahy.Tifrunner.gnm1.ann1.37ZKFY Arachis hypogaea HOM05D003948 ORTHO05D004610 2.6e-75 286.6 274 54.4
arahy.Tifrunner.gnm1.ann1.U8XBHX Arachis hypogaea HOM05D003948 ORTHO05D004610 2.6e-75 286.6 274 54.4
MD17G1205400 Malus domestica HOM05D003948 ORTHO05D004610 4.5e-75 285.8 255 58.4
MD17G1205900 Malus domestica HOM05D003948 ORTHO05D004610 4.5e-75 285.8 256 58.6
PGR031G2458 Punica granatum HOM05D003948 ORTHO05D004610 4.5e-75 285.8 255 58.4
Rhsim08G0216000 Rhododendron simsii HOM05D003948 ORTHO05D004610 5.8e-75 285.4 326 47.9
DCAR_025486 Daucus carota HOM05D003948 ORTHO05D004610 9.9e-75 284.6 251 56.2
Duzib168G1107 Durio zibethinus HOM05D003948 ORTHO05D004610 1.4e-73 280.8 324 46.0
Hund06577 Selenicereus undatus HOM05D003948 ORTHO05D004610 2.4e-73 280.0 267 53.9
Prupe.7G239700 Prunus persica HOM05D003948 ORTHO05D004610 9.3e-73 278.1 308 49.0
Manes.14G130600 Manihot esculenta HOM05D003948 ORTHO05D004610 1.2e-72 277.7 251 55.4
Thhalv10008186m.g Eutrema salsugineum HOM05D003948 ORTHO05D004610 1.6e-72 277.3 280 48.9
A06p11460 Brassica napus HOM05D003948 ORTHO05D004610 2.7e-72 276.6 254 52.0
BraA06t24323Z Brassica rapa HOM05D003948 ORTHO05D004610 2.7e-72 276.6 254 52.0
ATR1156G038 Amborella trichopoda HOM05D003948 ORTHO05D004610 6.0e-72 275.4 305 48.2
CiPaw.03G241800 Carya illinoinensis HOM05D003948 ORTHO05D004610 6.0e-72 275.4 254 53.9
Ciclev10008863m.g Citrus clementina HOM05D003948 ORTHO05D004610 6.0e-72 275.4 251 53.0
C05p13580 Brassica napus HOM05D003948 ORTHO05D004610 7.9e-72 275.0 254 52.0
CSS0012666 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 7.9e-72 275.0 303 49.2
Sp1g13770 Schrenkiella parvula HOM05D003948 ORTHO05D004610 7.9e-72 275.0 253 53.0
THA.LOC104813569 Tarenaya hassleriana HOM05D003948 ORTHO05D004610 7.9e-72 275.0 311 47.3
Actinidia22003 Actinidia chinensis HOM05D003948 ORTHO05D004610 1.0e-71 274.6 257 54.5
Actinidia40456 Actinidia chinensis HOM05D003948 ORTHO05D004610 1.3e-71 274.2 257 54.9
Thecc.09G123100 Theobroma cacao HOM05D003948 ORTHO05D004610 1.3e-71 274.2 254 53.9
AT1G15410 Arabidopsis thaliana HOM05D003948 ORTHO05D004610 2.3e-71 273.5 253 53.0
BcaC05g25483 Brassica carinata HOM05D003948 ORTHO05D004610 2.3e-71 273.5 254 52.4
Atru.chr7.1198 Acer truncatum HOM05D003948 ORTHO05D004610 5.1e-71 272.3 253 55.7
BolC5t30094H Brassica oleracea HOM05D003948 ORTHO05D004610 5.1e-71 272.3 254 51.6
TWI34G1010 Tripterygium wilfordii HOM05D003948 ORTHO05D004610 5.1e-71 272.3 312 47.1
AL1G27520 Arabidopsis lyrata HOM05D003948 ORTHO05D004610 8.7e-71 271.6 253 52.6
CSS0016874 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 1.1e-70 271.2 318 49.7
Rhsim01G0076600 Rhododendron simsii HOM05D003948 ORTHO05D004610 1.1e-70 271.2 325 45.5
Lj7A632T42 Lonicera japonica HOM05D003948 ORTHO05D004610 1.9e-70 270.4 258 54.7
QL02p087786 Quercus lobata HOM05D003948 ORTHO05D004610 3.3e-70 269.6 251 53.8
Cpa.g.sc648.2 Carica papaya HOM05D003948 ORTHO05D004610 4.3e-70 269.2 258 51.6
COL.COLO4_05762 Corchorus olitorius HOM05D003948 ORTHO05D004610 4.3e-70 269.2 253 53.4
Hma1.2p1_0018F.1_g012660 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 5.6e-70 268.9 318 46.5
Rhsim01G0076700 Rhododendron simsii HOM05D003948 ORTHO05D004610 5.6e-70 268.9 267 53.2
Aqoxy7G02097 Aquilegia oxysepala HOM05D003948 ORTHO05D004610 7.4e-70 268.5 255 54.1
Hma1.2p1_0018F.1_g012640 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 7.4e-70 268.5 252 54.0
Gorai.001G040900 Gossypium raimondii HOM05D003948 ORTHO05D004610 9.6e-70 268.1 324 43.2
RcHm_v2.0_Chr2g0089121 Rosa chinensis HOM05D003948 ORTHO05D004610 1.6e-69 267.3 319 44.2
Carub.0001s1520 Capsella rubella HOM05D003948 ORTHO05D004610 2.1e-69 266.9 253 51.4
CANSAT11G2309 Cannabis sativa HOM05D003948 ORTHO05D004610 2.8e-69 266.5 312 48.1
Gohir.A07G034800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 2.8e-69 266.5 324 42.9
Duzib187G0771 Durio zibethinus HOM05D003948 ORTHO05D004610 1.1e-68 264.6 325 44.9
FvH4_1g03590 Fragaria vesca HOM05D003948 ORTHO05D004610 1.1e-68 264.6 257 51.8
FAN19G2000 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.1e-68 264.6 257 51.8
FAN23G0975 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.8e-68 263.8 257 52.1
FAN28G1194 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.8e-68 263.8 257 52.1
Gohir.D07G038800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 2.4e-68 263.5 324 42.9
Ah.09g225870 Amaranthus hybridus HOM05D003948 ORTHO05D004610 3.1e-68 263.1 328 45.1
ClCG06G010930 Citrullus lanatus HOM05D003948 ORTHO05D004610 3.1e-68 263.1 312 44.2
Glyma.17G116500 Glycine max HOM05D003948 ORTHO05D004610 3.1e-68 263.1 294 50.0
Gohir.A05G017900 Gossypium hirsutum HOM05D003948 ORTHO05D004610 6.9e-68 261.9 326 43.3
Sed0015734 Sechium edule HOM05D003948 ORTHO05D004610 6.9e-68 261.9 257 49.4
vmacro20597 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 1.2e-67 261.2 280 49.6
Eucgr.C01133 Eucalyptus grandis HOM05D003948 ORTHO05D004610 1.5e-67 260.8 251 51.0
CDE02G2452 Ceratophyllum demersum HOM05D003948 ORTHO05D004610 2.0e-67 260.4 254 51.6
Gohir.D05G018800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 4.5e-67 259.2 326 43.3
Ca_21696_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 7.6e-67 258.5 253 52.6
arahy.Tifrunner.gnm1.ann1.T1A9DJ Arachis hypogaea HOM05D003948 ORTHO05D004610 1.3e-66 257.7 251 52.6
AUR62011090 Chenopodium quinoa HOM05D003948 ORTHO05D004610 2.2e-66 256.9 264 51.1
Phvul.003G162800 Phaseolus vulgaris HOM05D003948 ORTHO05D004610 2.2e-66 256.9 253 53.4
Gorai.009G019200 Gossypium raimondii HOM05D003948 ORTHO05D004610 2.9e-66 256.5 326 42.6
TPR.G10716 Trifolium pratense HOM05D003948 ORTHO05D004610 2.9e-66 256.5 267 51.3
arahy.Tifrunner.gnm1.ann1.VXE6AC Arachis hypogaea HOM05D003948 ORTHO05D004610 4.9e-66 255.8 251 52.2
AUR62033477 Chenopodium quinoa HOM05D003948 ORTHO05D004610 4.9e-66 255.8 274 48.9
Lj4g0000861 Lotus japonicus HOM05D003948 ORTHO05D004610 4.9e-66 255.8 259 52.9
VMungo1215G2012 Vigna mungo HOM05D003948 ORTHO05D004610 4.9e-66 255.8 256 52.7
Psat4g040400 Pisum sativum HOM05D003948 ORTHO05D004610 3.2e-65 253.1 253 52.6
FAN26G0686 Fragaria x ananassa HOM05D003948 ORTHO05D004610 4.2e-65 252.7 278 48.6
Glyma.05G008200 Glycine max HOM05D003948 ORTHO05D004610 7.1e-65 251.9 253 52.6
PGR142G4293 Punica granatum HOM05D003948 ORTHO05D004610 1.6e-64 250.8 246 50.4
EL10Ac8g18617 Beta vulgaris HOM05D003948 ORTHO05D004610 6.0e-64 248.8 322 44.1
MELO3C026644.2 Cucumis melo HOM05D003948 ORTHO05D004610 6.0e-64 248.8 258 48.1
Medtr4g114000 Medicago truncatula HOM05D003948 ORTHO05D004610 6.0e-64 248.8 254 51.6
SEGI_16675 Sequoiadendron giganteum HOM05D003948 ORTHO05D004610 7.9e-64 248.4 254 49.2
DCAR_014870 Daucus carota HOM05D003948 ORTHO05D004610 6.7e-63 245.4 299 42.8
Cc06_g08780 Coffea canephora HOM05D003948 ORTHO05D004610 1.5e-62 244.2 249 49.4
Os01g0555200 Oryza sativa ssp. japonica HOM05D003948 ORTHO05D004610 5.6e-62 242.3 305 43.3
ECA232G2488 Erigeron canadensis HOM05D003948 ORTHO05D004610 4.8e-61 239.2 160 68.1
Haze_25613 Corylus avellana HOM05D003948 ORTHO05D004610 1.4e-60 237.7 253 50.2
Thecc.06G071300 Theobroma cacao HOM05D003948 ORTHO05D004610 5.3e-60 235.7 206 58.3
Sabra01G0139400 Salix brachista HOM05D003948 ORTHO05D004610 3.4e-59 233.0 284 49.6
Zm00001eb342320 Zea mays HOM05D003948 ORTHO05D004610 5.8e-59 232.3 250 47.2
Duzib235G1097 Durio zibethinus HOM05D003948 ORTHO05D004610 4.2e-57 226.1 249 48.6
GSVIVG01015502001 Vitis vinifera HOM05D003948 ORTHO05D004610 1.9e-54 217.2 158 62.0
Rhsim03G0104000 Rhododendron simsii HOM05D003948 ORTHO05D004610 1.3e-50 204.5 182 55.5
PSO170G0552 Papaver somniferum HOM05D003948 ORTHO05D004610 1.1e-49 201.4 207 49.8
Mapoly0023s0100 Marchantia polymorpha HOM05D003948 ORTHO05D004610 5.5e-49 199.1 177 53.1
Gohir.D10G075401 Gossypium hirsutum HOM05D003948 ORTHO05D004610 3.0e-47 193.4 127 74.0
FvH4_6g30270 Fragaria vesca HOM05D003948 ORTHO05D004610 5.5e-41 172.6 168 51.8
Atru.chr1.3072 Acer truncatum HOM05D003948 ORTHO05D004610 2.2e-37 160.6 227 43.2
Nn2g11965 Nelumbo nucifera HOM05D003948 ORTHO05D004610 4.8e-37 159.5 166 48.8
SMO271G0179 Selaginella moellendorffii HOM05D003948 ORTHO05D004610 7.7e-35 152.1 173 44.5
CARHR015960 Cardamine hirsuta HOM05D003948 ORTHO05D004610 5.0e-34 149.4 191 40.3
MD02G1035500 Malus domestica HOM05D003948 ORTHO05D004610 5.5e-33 146.0 170 46.5
Dinv38099 Davidia involucrata HOM05D003948 ORTHO05D004610 4.7e-32 142.9 282 36.5
Lj5A69T36 Lonicera japonica HOM05D003948 ORTHO05D004610 4.7e-32 142.9 128 62.5
AUR62011108 Chenopodium quinoa HOM05D003948 ORTHO05D004610 1.0e-31 141.7 174 44.8
Phvul.005G175301 Phaseolus vulgaris HOM05D003948 ORTHO05D004610 7.0e-28 129.0 140 45.0
CARHR015950 Cardamine hirsuta HOM05D003948 ORTHO05D004610 9.1e-28 128.6 89 67.4
Sc18g0000700 Simmondsia chinensis HOM05D003948 ORTHO05D004610 7.7e-27 125.6 206 39.8
Lj1g0003343 Lotus japonicus HOM05D003948 ORTHO05D004610 6.7e-23 112.5 88 63.6
Peaxi162Scf00274g00858 Petunia axillaris HOM05D003948 ORTHO05D004610 4.4e-22 109.8 78 71.8
FAN26G3201 Fragaria x ananassa HOM05D003948 ORTHO05D004610 5.7e-22 109.4 80 63.8
Oeu041220.1 Olea europaea HOM05D003948 ORTHO05D004610 7.0e-20 102.4 77 58.4
DCAR_000573 Daucus carota HOM05D003948 ORTHO05D004610 6.5e-18 95.9 81 54.3
ClCG09G013940 Citrullus lanatus HOM05D003948 ORTHO05D004610 9.1e-12 75.5 56 62.5


User provided reference genes

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