Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G02600 Striga asiatica HOM05D005672 ORTHO05D003038 4.6e-91 337.8 162 100.0
MSTRG.22696 Avicennia marina HOM05D005672 ORTHO05D003038 1.0e-29 134.0 81 74.1
SalBow2G2205 Salvia bowleyana HOM05D005672 ORTHO05D003038 2.9e-29 132.5 79 74.7
Migut.I00857 Erythranthe guttata HOM05D005672 ORTHO05D003038 9.4e-28 127.5 79 70.9
Cc04_g03540 Coffea canephora HOM05D005672 ORTHO05D003038 2.0e-25 119.8 81 64.2
Oeu006796.1 Olea europaea HOM05D005672 ORTHO05D003038 2.2e-24 116.3 79 65.8
Peaxi162Scf00015g00326 Petunia axillaris HOM05D005672 ORTHO05D003038 5.5e-20 101.7 85 50.6
Sopen06g025030 Solanum pennellii HOM05D005672 ORTHO05D003038 2.7e-19 99.4 96 52.1
CAN.G395.17 Capsicum annuum HOM05D005672 ORTHO05D003038 4.7e-19 98.6 97 49.5
Solyc06g066750.3 Solanum lycopersicum HOM05D005672 ORTHO05D003038 1.4e-18 97.1 96 51.0
PGSC0003DMG400016538 Solanum tuberosum HOM05D005672 ORTHO05D003038 1.4e-18 97.1 96 51.0
Nitab4.5_0000351g0210 Nicotiana tabacum HOM05D005672 ORTHO05D003038 8.8e-18 94.4 93 50.5
HanXRQChr14g0455911 Helianthus annuus HOM05D005672 ORTHO05D003038 2.0e-17 93.2 73 56.2
Nitab4.5_0002327g0030 Nicotiana tabacum HOM05D005672 ORTHO05D003038 3.4e-17 92.4 85 51.8
unitig_21.g20351 Utricularia gibba HOM05D005672 ORTHO05D003038 3.4e-17 92.4 82 48.8
Dinv30519 Davidia involucrata HOM05D005672 ORTHO05D003038 7.5e-17 91.3 81 50.6
ECA234G3627 Erigeron canadensis HOM05D005672 ORTHO05D003038 7.5e-17 91.3 84 50.0
HanXRQChr10g0314951 Helianthus annuus HOM05D005672 ORTHO05D003038 2.2e-16 89.7 71 53.5
DCAR_026309 Daucus carota HOM05D005672 ORTHO05D003038 5.4e-15 85.1 92 41.3
DCAR_016224 Daucus carota HOM05D005672 ORTHO05D003038 7.0e-15 84.7 91 46.2
Lsat_1_v5_gn_5_129980 Lactuca sativa HOM05D005672 ORTHO05D003038 4.5e-14 82.0 80 47.5
Prupe.3G072900 Prunus persica HOM05D005672 ORTHO05D003038 7.7e-14 81.3 83 43.4
MD09G1214500 Malus domestica HOM05D005672 ORTHO05D003038 1.0e-13 80.9 80 46.2
QL05p025003 Quercus lobata HOM05D005672 ORTHO05D003038 6.5e-13 78.2 76 47.4
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 1.1e-12 77.4 78 41.0
Eucgr.L03103 Eucalyptus grandis HOM05D005672 ORTHO05D003038 1.1e-12 77.4 77 49.4
Eucgr.J03010 Eucalyptus grandis HOM05D005672 ORTHO05D003038 2.5e-12 76.3 77 46.8
FAN05G0478 Fragaria x ananassa HOM05D005672 ORTHO05D003038 5.5e-12 75.1 81 43.2
Actinidia32765 Actinidia chinensis HOM05D005672 ORTHO05D003038 7.2e-12 74.7 78 42.3
Actinidia01798 Actinidia chinensis HOM05D005672 ORTHO05D003038 1.2e-11 73.9 78 42.3
TAR624G0127 Trochodendron aralioides HOM05D005672 ORTHO05D003038 1.2e-11 73.9 80 40.0
Peaxi162Scf00207g00940 Petunia axillaris HOM05D005672 ORTHO05D003038 1.6e-11 73.6 94 40.4
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 1.6e-11 73.6 82 42.7
ECA232G2097 Erigeron canadensis HOM05D005672 ORTHO05D003038 2.7e-11 72.8 71 46.5
Actinidia14259 Actinidia chinensis HOM05D005672 ORTHO05D003038 4.7e-11 72.0 80 42.5
Manes.04G122400 Manihot esculenta HOM05D005672 ORTHO05D003038 6.1e-11 71.6 82 37.8
Atru.chr1.3244 Acer truncatum HOM05D005672 ORTHO05D003038 1.0e-10 70.9 78 43.6
Actinidia02490 Actinidia chinensis HOM05D005672 ORTHO05D003038 2.3e-10 69.7 80 41.2
Manes.04G122300 Manihot esculenta HOM05D005672 ORTHO05D003038 2.3e-10 69.7 80 38.8
Manes.04G122200 Manihot esculenta HOM05D005672 ORTHO05D003038 3.0e-10 69.3 80 38.8
vmacro18924 Vaccinium macrocarpon HOM05D005672 ORTHO05D003038 3.0e-10 69.3 87 36.8
Prupe.3G072600 Prunus persica HOM05D005672 ORTHO05D003038 1.5e-09 67.0 80 37.5
Thecc.06G084400 Theobroma cacao HOM05D005672 ORTHO05D003038 1.5e-09 67.0 82 39.0
Duzib192G0747 Durio zibethinus HOM05D005672 ORTHO05D003038 7.5e-09 64.7 85 40.0
Atru.chr1.3245 Acer truncatum HOM05D005672 ORTHO05D003038 1.7e-08 63.5 73 39.7
Duzib192G0991 Durio zibethinus HOM05D005672 ORTHO05D003038 2.2e-08 63.2 87 36.8
PGR102G1467 Punica granatum HOM05D005672 ORTHO05D003038 2.8e-08 62.8 89 37.1
Hund25654 Selenicereus undatus HOM05D005672 ORTHO05D003038 2.8e-08 62.8 79 35.4
Solyc03g120290.3 Solanum lycopersicum HOM05D005672 ORTHO05D003038 3.7e-08 62.4 90 37.8
CAN.G438.58 Capsicum annuum HOM05D005672 ORTHO05D003038 6.3e-08 61.6 87 37.9
Sed0001381 Sechium edule HOM05D005672 ORTHO05D003038 6.3e-08 61.6 80 37.5
PSO339G2623 Papaver somniferum HOM05D007482 ORTHO05D003038 1.1e-07 60.8 79 40.5
Sopen03g039180 Solanum pennellii HOM05D005672 ORTHO05D003038 1.1e-07 60.8 93 37.6
MELO3C023361.2 Cucumis melo HOM05D005672 ORTHO05D003038 1.4e-07 60.5 79 38.0
Thecc.06G084800 Theobroma cacao HOM05D005672 ORTHO05D003038 1.4e-07 60.5 82 36.6
ClCG09G002270 Citrullus lanatus HOM05D005672 ORTHO05D003038 1.8e-07 60.1 88 30.7
CsaV3_7G033060 Cucumis sativus L. HOM05D005672 ORTHO05D003038 1.8e-07 60.1 79 35.4
Duzib192G0432 Durio zibethinus HOM05D005672 ORTHO05D003038 2.4e-07 59.7 80 32.5
Duzib192G0507 Durio zibethinus HOM05D005672 ORTHO05D003038 2.4e-07 59.7 80 32.5
Duzib192G0711 Durio zibethinus HOM05D005672 ORTHO05D003038 2.4e-07 59.7 80 32.5
Prupe.3G072800 Prunus persica HOM05D005672 ORTHO05D003038 3.1e-07 59.3 82 35.4
ClCG09G002230 Citrullus lanatus HOM05D005672 ORTHO05D003038 5.4e-07 58.5 79 35.4
PSO339G1026 Papaver somniferum HOM05D007482 ORTHO05D003038 5.4e-07 58.5 82 40.2
Duzib235G0754 Durio zibethinus HOM05D005672 ORTHO05D003038 1.2e-06 57.4 67 34.3
Gorai.006G099200 Gossypium raimondii HOM05D005672 ORTHO05D003038 1.2e-06 57.4 82 36.6
Sed0004804 Sechium edule HOM05D005672 ORTHO05D003038 1.2e-06 57.4 86 32.6
PGSC0003DMG400002652 Solanum tuberosum HOM05D005672 ORTHO05D003038 2.0e-06 56.6 94 37.2
Thecc.06G084700 Theobroma cacao HOM05D005672 ORTHO05D003038 2.0e-06 56.6 68 38.2
Gohir.D09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 2.7e-06 56.2 82 36.6
Duzib235G0878 Durio zibethinus HOM05D005672 ORTHO05D003038 3.5e-06 55.8 66 34.8
Prupe.3G072700 Prunus persica HOM05D005672 ORTHO05D003038 3.5e-06 55.8 77 39.0
Migut.I00854 Erythranthe guttata HOM05D033963 ORTHO05D035179 4.5e-06 55.5 76 35.5
Prupe.6G180200 Prunus persica HOM05D005672 ORTHO05D003038 4.5e-06 55.5 77 39.0
Nitab4.5_0000671g0010 Nicotiana tabacum HOM05D005672 ORTHO05D003038 5.9e-06 55.1 42 57.1


User provided reference genes

Program Settings