Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G02574 Striga asiatica HOM05D002453 ORTHO05D405306 3.7e-114 414.8 205 100.0
SGA_v2.0_scaffold7G04131 Striga asiatica HOM05D000563 ORTHO05D402747 3.9e-87 325.1 220 75.5
SGA_v2.0_scaffold181G39749 Striga asiatica HOM05D002453 ORTHO05D008746 5.1e-55 218.4 234 55.6
SGA_v2.0_scaffold452G51850 Striga asiatica HOM05D002453 ORTHO05D403205 3.7e-53 212.2 208 58.7
SGA_v2.0_scaffold94G28512 Striga asiatica HOM05D002453 ORTHO05D406013 3.8e-26 122.5 74 73.0
SGA_v2.0_scaffold25G10753 Striga asiatica HOM05D000563 ORTHO05D000536 4.4e-14 82.4 124 41.1
SGA_v2.0_scaffold152G36837 Striga asiatica HOM05D002453 ORTHO05D401796 3.7e-13 79.3 51 64.7
Lalb_Chr17g0347431 Lupinus albus HOM05D000563 ORTHO05D000536 1.2e-11 74.3 131 38.9
QL09p050892 Quercus lobata HOM05D000563 ORTHO05D000536 1.2e-11 74.3 127 41.7
PGSC0003DMG400022701 Solanum tuberosum HOM05D000563 ORTHO05D000536 3.5e-11 72.8 131 38.9
Solyc01g009060.3 Solanum lycopersicum HOM05D000563 ORTHO05D000536 4.5e-11 72.4 131 38.9
Sopen01g004550 Solanum pennellii HOM05D000563 ORTHO05D000536 4.5e-11 72.4 131 38.9
Glyma.14G045500 Glycine max HOM05D000563 ORTHO05D000536 7.8e-11 71.6 131 38.2
Nitab4.5_0002567g0100 Nicotiana tabacum HOM05D000563 ORTHO05D000536 7.8e-11 71.6 131 38.2
PGSC0003DMG400027397 Solanum tuberosum HOM05D000563 ORTHO05D000536 7.8e-11 71.6 131 38.2
TWI73G1064 Tripterygium wilfordii HOM05D000563 ORTHO05D000536 7.8e-11 71.6 142 36.6
Nitab4.5_0000428g0100 Nicotiana tabacum HOM05D000563 ORTHO05D000536 1.0e-10 71.2 131 38.2
Nitab4.5_0008289g0020 Nicotiana tabacum HOM05D000563 ORTHO05D000536 1.0e-10 71.2 130 37.7
Peaxi162Scf00978g00217 Petunia axillaris HOM05D000563 ORTHO05D000536 1.0e-10 71.2 130 37.7
QL09p050502 Quercus lobata HOM05D000563 ORTHO05D000536 1.0e-10 71.2 127 40.2
Lalb_Chr10g0105811 Lupinus albus HOM05D000563 ORTHO05D000536 1.7e-10 70.5 131 38.2
PSO170G6118 Papaver somniferum HOM05D000563 ORTHO05D000536 1.7e-10 70.5 128 36.7
Peaxi162Scf00050g02418 Petunia axillaris HOM05D000563 ORTHO05D000536 2.3e-10 70.1 130 36.9
QL09p050537 Quercus lobata HOM05D000563 ORTHO05D000536 2.3e-10 70.1 127 40.9
SGA_v2.0_scaffold94G28511 Striga asiatica HOM05D002453 ORTHO05D401443 2.3e-10 70.1 120 42.5
Nitab4.5_0002300g0090 Nicotiana tabacum HOM05D000563 ORTHO05D000536 2.9e-10 69.7 131 37.4
Solyc11g072070.3 Solanum lycopersicum HOM05D000563 ORTHO05D000536 2.9e-10 69.7 131 37.4
Sopen11g029720 Solanum pennellii HOM05D000563 ORTHO05D000536 2.9e-10 69.7 131 37.4
Nitab4.5_0005829g0020 Nicotiana tabacum HOM05D000563 ORTHO05D000536 3.8e-10 69.3 141 37.6
BNapus_Darmor_BZH_scaffold_38p01220 Brassica napus HOM05D000563 ORTHO05D000536 5.0e-10 68.9 131 35.9
C02p10570 Brassica napus HOM05D000563 ORTHO05D000536 5.0e-10 68.9 131 35.9
BraA02t05609Z Brassica rapa HOM05D000563 ORTHO05D000536 5.0e-10 68.9 131 35.9
Glyma.02G272800 Glycine max HOM05D000563 ORTHO05D000536 5.0e-10 68.9 131 37.4
BolC5t34758H Brassica oleracea HOM05D000563 ORTHO05D000536 1.1e-09 67.8 131 38.9
Os07g0101400 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 1.1e-09 67.8 131 35.9
Manes.01G210400 Manihot esculenta HOM05D000563 ORTHO05D000536 1.5e-09 67.4 131 40.5
TWI09G1020 Tripterygium wilfordii HOM05D000563 ORTHO05D000536 1.5e-09 67.4 133 36.8
arahy.Tifrunner.gnm1.ann1.AKSW6P Arachis hypogaea HOM05D000563 ORTHO05D000536 1.9e-09 67.0 131 37.4
Manes.05G073000 Manihot esculenta HOM05D000563 ORTHO05D000536 1.9e-09 67.0 131 40.5
TWI09G1377 Tripterygium wilfordii HOM05D000563 ORTHO05D000536 1.9e-09 67.0 131 38.2
BcaC05g29798 Brassica carinata HOM05D000563 ORTHO05D000536 2.5e-09 66.6 131 38.2
C05p61020 Brassica napus HOM05D000563 ORTHO05D000536 2.5e-09 66.6 131 38.2
Sp3g05130 Schrenkiella parvula HOM05D000563 ORTHO05D000536 3.3e-09 66.2 131 38.9
BcaC09g47876 Brassica carinata HOM05D000563 ORTHO05D000536 4.3e-09 65.9 131 38.9
BolC1t05637H Brassica oleracea HOM05D000563 ORTHO05D000536 4.3e-09 65.9 131 38.9
BraA01t04451Z Brassica rapa HOM05D000563 ORTHO05D000536 4.3e-09 65.9 131 38.9
CARHR080710 Cardamine hirsuta HOM05D000563 ORTHO05D000536 4.3e-09 65.9 131 38.9
Cpa.g.sc50.145 Carica papaya HOM05D000563 ORTHO05D000536 4.3e-09 65.9 132 39.4
Thhalv10020850m.g Eutrema salsugineum HOM05D000563 ORTHO05D000536 4.3e-09 65.9 131 38.9
PSO170G1806 Papaver somniferum HOM05D000563 ORTHO05D000536 4.3e-09 65.9 140 37.1
TWI23G0153 Tripterygium wilfordii HOM05D000563 ORTHO05D000536 4.3e-09 65.9 135 36.3
CAN.G280.9 Capsicum annuum HOM05D000563 ORTHO05D000536 5.6e-09 65.5 116 38.8
COL.COLO4_21627 Corchorus olitorius HOM05D000563 ORTHO05D000536 5.6e-09 65.5 132 37.9
BcaC05g30046 Brassica carinata HOM05D000563 ORTHO05D000536 7.3e-09 65.1 131 37.4
PSO478G2840 Papaver somniferum HOM05D000563 ORTHO05D000536 7.3e-09 65.1 135 36.3
BcaC01g04328 Brassica carinata HOM05D000563 ORTHO05D000536 9.5e-09 64.7 131 38.2
A03p34550 Brassica napus HOM05D000563 ORTHO05D000536 9.5e-09 64.7 131 38.2
C03p42020 Brassica napus HOM05D000563 ORTHO05D000536 9.5e-09 64.7 131 38.2
BolC3t16483H Brassica oleracea HOM05D000563 ORTHO05D000536 9.5e-09 64.7 131 38.2
BraA03t12632Z Brassica rapa HOM05D000563 ORTHO05D000536 9.5e-09 64.7 131 38.2
CANSAT78G1014 Cannabis sativa HOM05D000563 ORTHO05D000536 9.5e-09 64.7 132 38.6
CAN.G651.14 Capsicum annuum HOM05D000563 ORTHO05D000536 9.5e-09 64.7 131 36.6
BcaB03g14657 Brassica carinata HOM05D000563 ORTHO05D000536 1.2e-08 64.3 131 37.4
Lsat_1_v5_gn_8_109901 Lactuca sativa HOM05D000563 ORTHO05D000536 1.2e-08 64.3 139 33.8
PSO170G1646 Papaver somniferum HOM05D000563 ORTHO05D000536 1.2e-08 64.3 129 36.4
PSO414G0002 Papaver somniferum HOM05D000563 ORTHO05D000536 1.2e-08 64.3 126 35.7
PSO714G0002 Papaver somniferum HOM05D000563 ORTHO05D000536 1.2e-08 64.3 126 35.7
Hma1.2p1_1644F.1_g295280 Hydrangea macrophylla HOM05D000563 ORTHO05D000536 2.1e-08 63.5 140 34.3
PSO478G2779 Papaver somniferum HOM05D000563 ORTHO05D000536 2.1e-08 63.5 129 32.6
Rhsim09G0168400 Rhododendron simsii HOM05D000563 ORTHO05D000536 2.1e-08 63.5 132 35.6
DCAR_002421 Daucus carota HOM05D000563 ORTHO05D000536 2.8e-08 63.2 131 38.9
Aa31LG5G16700 Aethionema arabicum HOM05D000563 ORTHO05D000536 3.6e-08 62.8 131 37.4
BcaB04g21323 Brassica carinata HOM05D000563 ORTHO05D000536 3.6e-08 62.8 131 37.4
MCO12G216 Micromonas commoda HOM05D000563 ORTHO05D000536 3.6e-08 62.8 154 31.2
Dinv44471 Davidia involucrata HOM05D000563 ORTHO05D000536 4.7e-08 62.4 131 37.4
QL06p005850 Quercus lobata HOM05D000563 ORTHO05D000536 6.1e-08 62.0 131 35.9
Peaxi162Scf00095g00912 Petunia axillaris HOM05D000563 ORTHO05D000536 8.0e-08 61.6 131 35.1
SEGI_04922 Sequoiadendron giganteum HOM05D000563 ORTHO05D000536 8.0e-08 61.6 131 33.6
A03p09250 Brassica napus HOM05D000563 ORTHO05D000536 1.4e-07 60.8 130 36.9
BraA03t10244Z Brassica rapa HOM05D000563 ORTHO05D000536 1.4e-07 60.8 130 36.9
DCAR_030589 Daucus carota HOM05D000563 ORTHO05D000536 1.4e-07 60.8 131 36.6
PSO729G0037 Papaver somniferum HOM05D000563 ORTHO05D000536 1.4e-07 60.8 125 36.0
Aqoxy3G04017 Aquilegia oxysepala HOM05D000563 ORTHO05D000536 2.3e-07 60.1 132 33.3
Glyma.16G036700 Glycine max HOM05D000563 ORTHO05D000536 4.0e-07 59.3 129 33.3
Solyc01g080250.3 Solanum lycopersicum HOM05D000563 ORTHO05D000536 4.0e-07 59.3 131 34.4
Sopen01g032030 Solanum pennellii HOM05D000563 ORTHO05D000536 4.0e-07 59.3 131 34.4
PGSC0003DMG400004349 Solanum tuberosum HOM05D000563 ORTHO05D000536 4.0e-07 59.3 131 34.4
BcaB01g05286 Brassica carinata HOM05D000563 ORTHO05D000536 5.2e-07 58.9 130 35.4
C03p10780 Brassica napus HOM05D000563 ORTHO05D000536 5.2e-07 58.9 130 35.4
CAN.G522.3 Capsicum annuum HOM05D000563 ORTHO05D000536 5.2e-07 58.9 131 34.4
DCAR_004418 Daucus carota HOM05D000139 ORTHO05D000103 5.2e-07 58.9 118 37.3
ECA236G1975 Erigeron canadensis HOM05D000563 ORTHO05D000536 6.8e-07 58.5 185 31.4
Nitab4.5_0002592g0020 Nicotiana tabacum HOM05D000563 ORTHO05D000536 8.9e-07 58.2 142 33.1
MD13G1141900 Malus domestica HOM05D000385 ORTHO05D000269 1.5e-06 57.4 119 31.9
PSO782G4583 Papaver somniferum HOM05D000563 ORTHO05D000536 1.5e-06 57.4 104 32.7
Os10g0425700 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 2.6e-06 56.6 123 31.7
Nitab4.5_0000732g0190 Nicotiana tabacum HOM05D000563 ORTHO05D000536 4.4e-06 55.8 131 34.4
PSO782G4555 Papaver somniferum HOM05D000563 ORTHO05D000536 4.4e-06 55.8 150 32.0
Phvul.001G104200 Phaseolus vulgaris HOM05D000563 ORTHO05D000536 4.4e-06 55.8 131 32.8
VMungo1383G1494 Vigna mungo HOM05D000563 ORTHO05D000536 7.5e-06 55.1 131 32.8


User provided reference genes

Program Settings