Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G02540 Striga asiatica HOM05D000453 ORTHO05D000387 8.2e-64 246.9 125 100.0
Migut.I00929 Erythranthe guttata HOM05D001353 ORTHO05D005187 1.0e-29 133.7 92 76.1
Lj9A510G78 Lonicera japonica HOM05D000453 ORTHO05D000387 1.0e-26 123.6 94 68.1
unitig_37.g12257 Utricularia gibba HOM05D000453 ORTHO05D000387 2.3e-26 122.5 90 68.9
Dinv30467 Davidia involucrata HOM05D000453 ORTHO05D000387 8.9e-26 120.6 68 82.4
GSVIVG01017044001 Vitis vinifera HOM05D001353 ORTHO05D005187 4.4e-25 118.2 68 82.4
Ciclev10025643m.g Citrus clementina HOM05D000453 ORTHO05D000387 7.5e-25 117.5 88 62.5
Dinv38005 Davidia involucrata HOM05D000453 ORTHO05D000387 9.8e-25 117.1 68 77.9
Hma1.2p1_3118F.1_g332820 Hydrangea macrophylla HOM05D000453 ORTHO05D000387 1.3e-24 116.7 89 66.3
CANSAT56G1916 Cannabis sativa HOM05D000453 ORTHO05D000387 1.7e-24 116.3 100 60.0
MD09G1207800 Malus domestica HOM05D000453 ORTHO05D000387 3.7e-24 115.2 87 62.1
FvH4_6g31950 Fragaria vesca HOM05D000453 ORTHO05D000387 4.9e-24 114.8 70 74.3
Atru.chr1.3462 Acer truncatum HOM05D000453 ORTHO05D000387 6.4e-24 114.4 69 76.8
Nitab4.5_0003039g0020 Nicotiana tabacum HOM05D000453 ORTHO05D000387 8.3e-24 114.0 88 63.6
Rhsim08G0225200 Rhododendron simsii HOM05D000453 ORTHO05D000387 1.1e-23 113.6 80 72.5
Cc04_g02870 Coffea canephora HOM05D000453 ORTHO05D000387 1.4e-23 113.2 68 77.9
CSS0009363 Camellia sinensis var. sinensis HOM05D000453 ORTHO05D000387 2.4e-23 112.5 68 73.5
Haze_16338 Corylus avellana HOM05D001353 ORTHO05D005187 2.4e-23 112.5 73 71.2
Prupe.3G063900 Prunus persica HOM05D001353 ORTHO05D005187 3.2e-23 112.1 70 70.0
Nitab4.5_0009267g0010 Nicotiana tabacum HOM05D000453 ORTHO05D000387 4.1e-23 111.7 88 62.5
Peaxi162Scf00034g00049 Petunia axillaris HOM05D000453 ORTHO05D000387 7.0e-23 110.9 92 60.9
CsaV3_3G023780 Cucumis sativus L. HOM05D000453 ORTHO05D000387 1.2e-22 110.2 89 64.0
Actinidia32714 Actinidia chinensis HOM05D000453 ORTHO05D000387 1.6e-22 109.8 66 78.8
RcHm_v2.0_Chr2g0139371 Rosa chinensis HOM05D000453 ORTHO05D000387 1.6e-22 109.8 70 70.0
Manes.04G131500 Manihot esculenta HOM05D000453 ORTHO05D000387 2.0e-22 109.4 68 70.6
DCAR_016202 Daucus carota HOM05D000453 ORTHO05D000387 4.6e-22 108.2 70 70.0
FAN14G3906 Fragaria x ananassa HOM05D000453 ORTHO05D000387 7.8e-22 107.5 70 70.0
Potri.003G051100 Populus trichocarpa HOM05D000453 ORTHO05D000387 1.7e-21 106.3 68 69.1
Gohir.A10G143000 Gossypium hirsutum HOM05D000453 ORTHO05D000387 3.0e-21 105.5 69 68.1
Gorai.011G136600 Gossypium raimondii HOM05D000453 ORTHO05D000387 3.0e-21 105.5 69 68.1
MELO3C012984.2 Cucumis melo HOM05D000453 ORTHO05D000387 3.9e-21 105.1 80 67.5
DCAR_016204 Daucus carota HOM05D000117 ORTHO05D000070 6.6e-21 104.4 69 65.2
Sed0022173 Sechium edule HOM05D000453 ORTHO05D000387 1.9e-20 102.8 68 67.6
Duzib151G0806 Durio zibethinus HOM05D000453 ORTHO05D000387 2.5e-20 102.4 69 65.2
Duzib268G0487 Durio zibethinus HOM05D000453 ORTHO05D000387 2.5e-20 102.4 68 66.2
Thecc.06G095200 Theobroma cacao HOM05D000453 ORTHO05D000387 2.5e-20 102.4 68 66.2
TPR.G37216 Trifolium pratense HOM05D000453 ORTHO05D000387 3.3e-20 102.1 69 69.6
Nn3g18140 Nelumbo nucifera HOM05D000453 ORTHO05D000387 4.3e-20 101.7 99 48.5
Phvul.005G169900 Phaseolus vulgaris HOM05D000453 ORTHO05D000387 9.5e-20 100.5 90 58.9
Sabra03G0028000 Salix brachista HOM05D000453 ORTHO05D000387 9.5e-20 100.5 68 63.2
COL.COLO4_30465 Corchorus olitorius HOM05D000453 ORTHO05D000387 1.2e-19 100.1 73 61.6
Glyma.13G356400 Glycine max HOM05D000453 ORTHO05D000387 1.2e-19 100.1 90 58.9
unitig_88.g27608 Utricularia gibba HOM05D000453 ORTHO05D000387 1.2e-19 100.1 143 46.9
Glyma.15G017700 Glycine max HOM05D000453 ORTHO05D000387 1.6e-19 99.8 90 58.9
Psat5g297280 Pisum sativum HOM05D000453 ORTHO05D000387 1.6e-19 99.8 77 63.6
VMungo1080G0580 Vigna mungo HOM05D000453 ORTHO05D000387 2.1e-19 99.4 89 57.3
CiPaw.01G234200 Carya illinoinensis HOM05D000453 ORTHO05D000387 4.7e-19 98.2 57 77.2
Ca_01140_v3 Cicer arietinum L. HOM05D004680 ORTHO05D005939 8.0e-19 97.4 79 58.2
Lalb_Chr24g0396001 Lupinus albus HOM05D000453 ORTHO05D000387 8.0e-19 97.4 101 51.5
Medtr2g101410 Medicago truncatula HOM05D000453 ORTHO05D000387 1.1e-18 97.1 69 66.7
arahy.Tifrunner.gnm1.ann1.MNZU98 Arachis hypogaea HOM05D000453 ORTHO05D000387 1.4e-18 96.7 69 68.1
arahy.Tifrunner.gnm1.ann1.RK7M19 Arachis hypogaea HOM05D001323 ORTHO05D000387 1.4e-18 96.7 69 68.1
DCAR_003799 Daucus carota HOM05D000453 ORTHO05D000387 2.3e-18 95.9 67 67.2
Solyc12g044320.2 Solanum lycopersicum HOM05D000453 ORTHO05D000387 2.3e-18 95.9 82 58.5
Sopen12g022590 Solanum pennellii HOM05D000453 ORTHO05D000387 2.3e-18 95.9 82 58.5
Lj3g0000595 Lotus japonicus HOM05D000453 ORTHO05D000387 5.2e-18 94.7 102 52.0
TWI18G0178 Tripterygium wilfordii HOM05D000453 ORTHO05D000387 6.8e-18 94.4 69 60.9
PGR102G2750 Punica granatum HOM05D000453 ORTHO05D000387 1.2e-17 93.6 92 57.6
QL05p021314 Quercus lobata HOM05D000453 ORTHO05D000387 1.2e-17 93.6 60 68.3
PGSC0003DMG400026464 Solanum tuberosum HOM05D000453 ORTHO05D000387 1.5e-17 93.2 81 58.0
Cfa002108 Carpinus fangiana HOM05D001353 ORTHO05D005187 2.0e-17 92.8 61 67.2
TAR383G0979 Trochodendron aralioides HOM05D000453 ORTHO05D000387 2.2e-16 89.4 51 72.5
TAR383G0537 Trochodendron aralioides HOM05D000453 ORTHO05D000387 6.4e-16 87.8 51 70.6
Eucgr.J02951 Eucalyptus grandis HOM05D000453 ORTHO05D000387 3.2e-15 85.5 85 56.5
Aqoxy7G01516 Aquilegia oxysepala HOM05D000453 ORTHO05D000387 4.1e-15 85.1 51 66.7
MBI04_g14926_MAGBIO Magnolia biondii HOM05D000453 ORTHO05D000387 5.1e-13 78.2 68 45.6
ATR0315G081 Amborella trichopoda HOM05D000453 ORTHO05D000387 1.6e-11 73.2 94 42.6
ATR0315G146 Amborella trichopoda HOM05D000453 ORTHO05D000387 1.1e-10 70.5 67 50.7
ATR0559G313 Amborella trichopoda HOM05D000453 ORTHO05D000387 2.9e-08 62.4 63 46.0
MBI01_g06186_MAGBIO Magnolia biondii HOM05D000453 ORTHO05D006365 1.9e-07 59.7 72 36.1
MBI04_g02612_MAGBIO Magnolia biondii HOM05D000453 ORTHO05D006365 1.9e-07 59.7 100 29.0
Aqoxy7G03920 Aquilegia oxysepala HOM05D000453 ORTHO05D006365 2.4e-07 59.3 67 38.8
arahy.Tifrunner.gnm1.ann1.ERQ37Z Arachis hypogaea HOM05D000453 ORTHO05D006365 3.2e-07 58.9 88 33.0
Atru.chr7.2117 Acer truncatum HOM05D000453 ORTHO05D006365 5.4e-07 58.2 69 34.8
arahy.Tifrunner.gnm1.ann1.VF9H9Z Arachis hypogaea HOM05D000453 ORTHO05D006365 5.4e-07 58.2 88 33.0
Lalb_Chr08g0243101 Lupinus albus HOM05D000453 ORTHO05D006365 7.1e-07 57.8 67 35.8
Phvul.009G108900 Phaseolus vulgaris HOM05D000453 ORTHO05D006365 7.1e-07 57.8 66 36.4
SalBow4G0122 Salvia bowleyana HOM05D000453 ORTHO05D006365 7.1e-07 57.8 72 37.5
VMungo1309G0607 Vigna mungo HOM05D000453 ORTHO05D006365 7.1e-07 57.8 66 36.4
Atru.chr7.2101 Acer truncatum HOM05D000453 ORTHO05D006365 9.2e-07 57.4 69 34.8
Nn3g18156 Nelumbo nucifera HOM05D000453 ORTHO05D006365 9.2e-07 57.4 72 36.1
Aqoxy7G01506 Aquilegia oxysepala HOM05D000453 ORTHO05D006365 1.6e-06 56.6 72 34.7
Gorai.010G107800 Gossypium raimondii HOM05D000453 ORTHO05D006365 1.6e-06 56.6 69 33.3
Potri.006G239600 Populus trichocarpa HOM05D000453 ORTHO05D006365 1.6e-06 56.6 67 34.3
TPR.G1389 Trifolium pratense HOM05D000453 ORTHO05D006365 1.6e-06 56.6 66 33.3
CANSAT25G0078 Cannabis sativa HOM05D000453 ORTHO05D006365 2.1e-06 56.2 67 35.8
GSVIVG01035639001 Vitis vinifera HOM05D000453 ORTHO05D006365 2.1e-06 56.2 57 42.1
ATR0171G005 Amborella trichopoda HOM05D000453 ORTHO05D006365 2.7e-06 55.8 51 47.1
CSS0042960 Camellia sinensis var. sinensis HOM05D000453 ORTHO05D006365 2.7e-06 55.8 67 35.8
Duzib168G0898 Durio zibethinus HOM05D000453 ORTHO05D006365 2.7e-06 55.8 69 33.3
Duzib187G1218 Durio zibethinus HOM05D000453 ORTHO05D006365 2.7e-06 55.8 69 33.3
SEGI_24722 Sequoiadendron giganteum HOM05D000453 ORTHO05D000387 2.7e-06 55.8 73 35.6
Gohir.D06G093400 Gossypium hirsutum HOM05D000453 ORTHO05D006365 3.5e-06 55.5 69 33.3
Nitab4.5_0000151g0400 Nicotiana tabacum HOM05D000453 ORTHO05D006365 3.5e-06 55.5 67 34.3
Sabra06G0187200 Salix brachista HOM05D000453 ORTHO05D006365 3.5e-06 55.5 67 34.3
TAR624G0894 Trochodendron aralioides HOM05D000453 ORTHO05D006365 3.5e-06 55.5 57 40.4
TAR624G1294 Trochodendron aralioides HOM05D000453 ORTHO05D006365 3.5e-06 55.5 57 40.4
unitig_88.g27691 Utricularia gibba HOM05D000453 ORTHO05D006365 3.5e-06 55.5 67 32.8
Gohir.A06G093700 Gossypium hirsutum HOM05D000453 ORTHO05D006365 4.6e-06 55.1 69 31.9
Nitab4.5_0000837g0070 Nicotiana tabacum HOM05D000453 ORTHO05D006365 4.6e-06 55.1 67 34.3
Thecc.09G043500 Theobroma cacao HOM05D000453 ORTHO05D006365 6.0e-06 54.7 99 28.3
Gohir.D13G192900 Gossypium hirsutum HOM05D000453 ORTHO05D006365 7.8e-06 54.3 69 34.8
Gorai.013G218800 Gossypium raimondii HOM05D000453 ORTHO05D006365 7.8e-06 54.3 69 34.8
Medtr3g110185 Medicago truncatula HOM05D001382 ORTHO05D001266 7.8e-06 54.3 67 29.9
Nn3g18155 Nelumbo nucifera HOM05D000453 ORTHO05D006365 7.8e-06 54.3 69 33.3
Sopen08g020800 Solanum pennellii HOM05D000453 ORTHO05D006365 7.8e-06 54.3 67 32.8
PGSC0003DMG400009600 Solanum tuberosum HOM05D000453 ORTHO05D006365 7.8e-06 54.3 67 32.8


User provided reference genes

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