Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 5.8e-158 560.8 280 100.0
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 6.0e-107 391.3 323 63.8
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 4.5e-102 375.2 324 60.2
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 5.0e-93 345.1 319 56.4
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 5.0e-93 345.1 319 56.4
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 8.5e-93 344.4 321 56.7
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 8.5e-93 344.4 321 56.7
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 8.5e-93 344.4 321 56.7
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 7.2e-92 341.3 321 57.0
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 7.2e-92 341.3 319 55.8
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 1.6e-91 340.1 316 54.7
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 3.6e-91 339.0 319 56.4
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 1.0e-90 337.4 319 55.2
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 1.4e-90 337.0 318 55.7
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 1.4e-90 337.0 314 56.1
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 1.4e-90 337.0 318 55.7
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 1.8e-90 336.7 321 56.4
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.8e-90 336.7 320 56.2
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 2.3e-90 336.3 321 56.4
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 3.9e-90 335.5 326 55.5
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 5.1e-90 335.1 318 55.0
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 5.1e-90 335.1 318 55.0
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 5.1e-90 335.1 327 53.8
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 6.7e-90 334.7 319 55.8
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 1.1e-89 334.0 321 56.1
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 1.1e-89 334.0 321 55.8
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.5e-89 333.6 316 54.7
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 1.5e-89 333.6 325 54.2
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 4.3e-89 332.0 346 52.3
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 1.3e-88 330.5 315 54.9
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 1.3e-88 330.5 321 55.5
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 1.3e-88 330.5 325 53.5
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 1.7e-88 330.1 325 53.2
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 2.2e-88 329.7 318 54.4
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 2.2e-88 329.7 330 54.2
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 2.8e-88 329.3 322 55.3
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 3.7e-88 328.9 323 55.1
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 4.8e-88 328.6 330 52.7
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 4.8e-88 328.6 311 55.0
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 6.3e-88 328.2 328 52.7
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 1.1e-87 327.4 323 54.8
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 1.1e-87 327.4 313 55.3
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 1.4e-87 327.0 315 54.6
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 1.8e-87 326.6 316 53.2
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 1.3e-85 320.5 341 50.4
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 1.3e-85 320.5 319 54.9
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 3.8e-85 318.9 327 51.7
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 3.8e-85 318.9 313 55.0
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 6.5e-85 318.2 324 53.4
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 2.5e-84 316.2 325 51.1
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 4.2e-84 315.5 325 52.6
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 5.5e-84 315.1 315 52.7
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 7.2e-84 314.7 349 51.3
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 2.1e-83 313.2 322 53.1
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 2.1e-83 313.2 316 51.9
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 3.6e-83 312.4 324 52.8
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 6.1e-83 311.6 326 52.5
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 1.8e-82 310.1 326 51.8
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 1.8e-82 310.1 315 50.8
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 6.7e-82 308.1 340 49.7
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 1.1e-81 307.4 322 51.6
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 1.1e-81 307.4 326 51.2
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 3.3e-81 305.8 321 49.5
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 7.4e-81 304.7 315 51.1
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 1.3e-80 303.9 319 52.4
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 2.2e-80 303.1 323 49.5
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 2.8e-80 302.8 316 50.6
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 3.7e-80 302.4 316 51.9
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 8.2e-80 301.2 324 50.9
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 1.4e-79 300.4 230 67.0
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 1.8e-79 300.1 319 50.5
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 5.3e-79 298.5 328 49.4
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 5.3e-79 298.5 328 49.4
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 1.2e-78 297.4 219 68.0
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 5.9e-78 295.0 322 50.9
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 5.9e-78 295.0 283 55.5
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 1.3e-77 293.9 312 50.6
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 4.2e-76 288.9 319 49.5
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 1.1e-73 280.8 275 56.4
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 2.2e-72 276.6 288 51.0
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 2.4e-71 273.1 298 51.0
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 5.9e-70 268.5 316 48.7
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.5e-68 263.8 257 55.6
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 3.6e-67 259.2 228 58.8
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 2.3e-66 256.5 244 53.3
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 3.4e-65 252.7 314 46.5
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 5.7e-65 251.9 298 44.3
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 9.1e-63 244.6 243 53.5
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 2.9e-61 239.6 250 52.4
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 3.8e-61 239.2 321 40.8
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 2.7e-59 233.0 294 45.2
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 4.7e-59 232.3 325 43.1
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 1.7e-56 223.8 332 40.1
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.5e-54 216.1 311 39.2
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.5e-54 216.1 311 39.2
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 1.3e-53 214.2 288 41.3
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 2.5e-52 209.9 231 49.4
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 2.5e-52 209.9 307 38.1
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 5.2e-50 202.2 307 36.8
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.0e-49 200.3 314 35.7
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 8.3e-48 194.9 308 35.7
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.0e-46 190.3 312 35.3
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 7.8e-46 188.3 217 43.8
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 1.0e-45 188.0 259 41.7
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 5.6e-44 182.2 260 42.7
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 3.6e-43 179.5 307 34.9
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 1.3e-37 161.0 273 38.5
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 2.4e-31 140.2 144 49.3
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 3.2e-15 86.7 53 69.8


User provided reference genes

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