Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold59G20629 Striga asiatica HOM05D005816 ORTHO05D006915 2.4e-78 295.4 150 100.0
Dinv36900 Davidia involucrata HOM05D005816 ORTHO05D006915 1.1e-09 67.4 61 55.7
Sopen03g038660 Solanum pennellii HOM05D005816 ORTHO05D006915 1.1e-09 67.4 48 58.3
Cc11_g10680 Coffea canephora HOM05D005816 ORTHO05D006915 1.4e-09 67.0 72 50.0
Gohir.D13G069300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 1.4e-09 67.0 65 50.8
Oeu044626.1 Olea europaea HOM05D005816 ORTHO05D006915 1.4e-09 67.0 74 48.6
PGSC0003DMG400005703 Solanum tuberosum HOM05D005816 ORTHO05D006915 1.8e-09 66.6 48 58.3
Gorai.013G079400 Gossypium raimondii HOM05D005816 ORTHO05D006915 3.1e-09 65.9 65 49.2
Migut.E00293 Erythranthe guttata HOM05D005816 ORTHO05D006915 5.3e-09 65.1 81 44.4
Aa31LG4G4260 Aethionema arabicum HOM05D005816 ORTHO05D006915 6.9e-09 64.7 56 53.6
Gohir.A13G071300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 6.9e-09 64.7 65 46.2
Oeu041876.1 Olea europaea HOM05D005816 ORTHO05D006915 9.1e-09 64.3 68 51.5
SalBow8G0077 Salvia bowleyana HOM05D005816 ORTHO05D006915 1.2e-08 63.9 63 54.0
HanXRQChr05g0149681 Helianthus annuus HOM05D005816 ORTHO05D006915 1.5e-08 63.5 61 49.2
Duzib251G0462 Durio zibethinus HOM05D005816 ORTHO05D006915 2.0e-08 63.2 81 45.7
Manes.06G073000 Manihot esculenta HOM05D005816 ORTHO05D006915 2.0e-08 63.2 73 49.3
Eucgr.G02356 Eucalyptus grandis HOM05D005816 ORTHO05D006915 2.6e-08 62.8 66 50.0
Oeu024099.1 Olea europaea HOM05D005816 ORTHO05D006915 2.6e-08 62.8 70 45.7
TAR629G1032 Trochodendron aralioides HOM05D005816 ORTHO05D006915 2.6e-08 62.8 75 48.0
Gohir.A07G038800 Gossypium hirsutum HOM05D005816 ORTHO05D006915 4.5e-08 62.0 58 56.9
Phvul.007G101800 Phaseolus vulgaris HOM05D005816 ORTHO05D006915 5.9e-08 61.6 98 42.9
PGR119G1376 Punica granatum HOM05D005816 ORTHO05D006915 5.9e-08 61.6 61 54.1
Gohir.D07G042900 Gossypium hirsutum HOM05D005816 ORTHO05D006915 7.7e-08 61.2 51 62.7
Gorai.001G045900 Gossypium raimondii HOM05D005816 ORTHO05D006915 7.7e-08 61.2 51 62.7
Carub.0002s2074 Capsella rubella HOM05D005816 ORTHO05D006915 1.0e-07 60.8 49 61.2
Hma1.2p1_0862F.1_g229870 Hydrangea macrophylla HOM05D005816 ORTHO05D006915 1.0e-07 60.8 68 52.9
Prupe.1G304500 Prunus persica HOM05D005816 ORTHO05D006915 1.0e-07 60.8 63 52.4
Thecc.03G027700 Theobroma cacao HOM05D005816 ORTHO05D006915 1.0e-07 60.8 82 47.6
CARHR067080 Cardamine hirsuta HOM05D005816 ORTHO05D006915 1.3e-07 60.5 55 52.7
Manes.14G096700 Manihot esculenta HOM05D005816 ORTHO05D006915 1.3e-07 60.5 72 47.2
COL.COLO4_22708 Corchorus olitorius HOM05D005816 ORTHO05D006915 2.9e-07 59.3 68 50.0
Aqoxy3G03898 Aquilegia oxysepala HOM05D005816 ORTHO05D006915 3.8e-07 58.9 64 48.4
Duzib248G0754 Durio zibethinus HOM05D005816 ORTHO05D006915 3.8e-07 58.9 87 42.5
Lalb_Chr21g0313371 Lupinus albus HOM05D005816 ORTHO05D006915 5.0e-07 58.5 76 46.1
Thecc.02G362100 Theobroma cacao HOM05D005816 ORTHO05D006915 5.0e-07 58.5 57 49.1
VMungo0720G2795 Vigna mungo HOM05D005816 ORTHO05D006915 5.0e-07 58.5 70 48.6
AT1G73965 Arabidopsis thaliana HOM05D005816 ORTHO05D006915 6.5e-07 58.2 47 59.6
CSS0007623 Camellia sinensis var. sinensis HOM05D005816 ORTHO05D006915 6.5e-07 58.2 50 50.0
CiPaw.16G002600 Carya illinoinensis HOM05D005816 ORTHO05D006915 6.5e-07 58.2 53 54.7
Glyma.10G205100 Glycine max HOM05D005816 ORTHO05D006915 6.5e-07 58.2 53 52.8
HanXRQChr16g0528861 Helianthus annuus HOM05D005816 ORTHO05D006915 6.5e-07 58.2 61 52.5
Lsat_1_v5_gn_4_19200 Lactuca sativa HOM05D005816 ORTHO05D006915 6.5e-07 58.2 58 51.7
Potri.010G130400 Populus trichocarpa HOM05D005816 ORTHO05D006915 6.5e-07 58.2 81 39.5
CiPaw.15G002700 Carya illinoinensis HOM05D005816 ORTHO05D006915 8.5e-07 57.8 89 41.6
Migut.L01100 Erythranthe guttata HOM05D005816 ORTHO05D006915 8.5e-07 57.8 59 52.5
TPR.G24449 Trifolium pratense HOM05D007541 ORTHO05D009404 8.5e-07 57.8 88 38.6
BolC6t39843H Brassica oleracea HOM05D005816 ORTHO05D006915 1.1e-06 57.4 49 57.1
Cpa.g.sc13.61 Carica papaya HOM05D005816 ORTHO05D006915 1.1e-06 57.4 60 46.7
Glyma.17G121800 Glycine max HOM05D005816 ORTHO05D006915 1.1e-06 57.4 63 42.9
TPR.G9813 Trifolium pratense HOM05D005816 ORTHO05D006915 1.1e-06 57.4 61 49.2
Atru.chr11.1371 Acer truncatum HOM05D005816 ORTHO05D006915 1.4e-06 57.0 71 45.1
Glyma.20G185400 Glycine max HOM05D005816 ORTHO05D006915 1.4e-06 57.0 55 56.4
Lj4g0025770 Lotus japonicus HOM05D005816 ORTHO05D006915 1.4e-06 57.0 63 42.9
A07p39820 Brassica napus HOM05D005816 ORTHO05D006915 1.9e-06 56.6 49 57.1
BraA07t31528Z Brassica rapa HOM05D005816 ORTHO05D006915 1.9e-06 56.6 49 57.1
Thhalv10019753m.g Eutrema salsugineum HOM05D005816 ORTHO05D006915 1.9e-06 56.6 50 54.0
Lsat_1_v5_gn_4_112260 Lactuca sativa HOM05D005816 ORTHO05D006915 1.9e-06 56.6 57 43.9
Lalb_Chr10g0099661 Lupinus albus HOM05D005816 ORTHO05D006915 1.9e-06 56.6 66 48.5
COL.COLO4_07860 Corchorus olitorius HOM05D005816 ORTHO05D006915 2.5e-06 56.2 60 46.7
AL2G33800 Arabidopsis lyrata HOM05D005816 ORTHO05D006915 3.2e-06 55.8 55 50.9
Potri.008G115600 Populus trichocarpa HOM05D005816 ORTHO05D006915 3.2e-06 55.8 84 41.7
C06p48080 Brassica napus HOM05D005816 ORTHO05D006915 4.2e-06 55.5 49 55.1
Nn3g17700 Nelumbo nucifera HOM05D005816 ORTHO05D006915 4.2e-06 55.5 74 41.9
Sp5g29165 Schrenkiella parvula HOM05D005816 ORTHO05D006915 4.2e-06 55.5 48 54.2
ATR0681G007 Amborella trichopoda HOM05D005816 ORTHO05D006915 5.5e-06 55.1 36 69.4
Phvul.003G177600 Phaseolus vulgaris HOM05D005816 ORTHO05D006915 5.5e-06 55.1 73 41.1
Atru.chr9.746 Acer truncatum HOM05D005816 ORTHO05D006915 7.2e-06 54.7 55 54.5
BcaB03g15849 Brassica carinata HOM05D005816 ORTHO05D006915 7.2e-06 54.7 61 49.2
BcaC08g46825 Brassica carinata HOM05D005816 ORTHO05D006915 7.2e-06 54.7 48 56.2
Prupe.5G216700 Prunus persica HOM05D005816 ORTHO05D006915 7.2e-06 54.7 101 42.6
RcHm_v2.0_Chr4g0435951 Rosa chinensis HOM05D005816 ORTHO05D006915 7.2e-06 54.7 60 45.0
Sc11g0003040 Simmondsia chinensis HOM05D005816 ORTHO05D006915 7.2e-06 54.7 68 44.1
Ciclev10033717m.g Citrus clementina HOM05D005816 ORTHO05D006915 9.4e-06 54.3 98 38.8
FvH4_4g28190 Fragaria vesca HOM05D005816 ORTHO05D006915 9.4e-06 54.3 56 46.4
FAN12G1213 Fragaria x ananassa HOM05D005816 ORTHO05D006915 9.4e-06 54.3 56 46.4
Lsat_1_v5_gn_3_58221 Lactuca sativa HOM05D005816 ORTHO05D006915 9.4e-06 54.3 59 47.5
Sabra08G0087500 Salix brachista HOM05D005816 ORTHO05D006915 9.4e-06 54.3 105 37.1


User provided reference genes

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