Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 0.0e+00 1281.2 641 100.0
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 2.7e-275 951.8 651 74.7
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 8.5e-274 946.8 619 75.0
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 2.4e-252 875.5 625 70.2
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 4.7e-248 861.3 656 67.8
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 8.4e-229 797.3 722 60.5
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 7.8e-227 790.8 645 61.4
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 7.3e-225 784.3 641 62.1
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 7.3e-225 784.3 574 66.4
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 6.9e-223 777.7 576 65.3
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 6.6e-218 761.1 638 59.4
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 1.9e-217 759.6 646 59.9
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 2.5e-217 759.2 632 61.1
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 1.1e-215 753.8 638 58.9
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 7.6e-214 747.7 630 60.0
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 2.2e-213 746.1 648 59.0
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 1.1e-209 733.8 663 56.9
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.9e-209 733.0 583 62.1
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 1.3e-208 730.3 574 62.7
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 4.8e-208 728.4 577 62.9
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 4.0e-207 725.3 660 57.1
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 5.3e-207 724.9 638 58.3
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 1.2e-206 723.8 575 60.0
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 4.5e-206 721.8 648 55.6
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 5.8e-206 721.5 637 57.0
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 1.3e-205 720.3 584 59.6
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 1.7e-205 719.9 643 56.6
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 4.9e-205 718.4 661 55.5
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 4.9e-205 718.4 611 58.3
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 2.4e-204 716.1 642 55.9
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 3.2e-204 715.7 544 63.6
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 4.2e-204 715.3 632 57.6
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 1.3e-202 710.3 645 56.6
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 3.9e-202 708.8 572 60.3
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 6.7e-202 708.0 667 56.7
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 3.3e-201 705.7 576 60.4
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 7.4e-201 704.5 572 60.3
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 7.4e-201 704.5 630 54.8
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 9.6e-201 704.1 639 56.0
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 4.8e-200 701.8 581 59.6
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 6.2e-200 701.4 572 60.0
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 1.1e-199 700.7 660 55.2
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 2.4e-199 699.5 573 58.6
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 5.3e-199 698.4 581 59.6
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 1.5e-198 696.8 573 59.7
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 1.3e-197 693.7 579 59.4
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.7e-197 693.3 578 59.0
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 1.7e-197 693.3 575 59.1
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 3.8e-197 692.2 663 53.2
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 8.4e-197 691.0 646 55.3
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 1.9e-196 689.9 627 56.5
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 7.1e-196 688.0 627 55.8
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 1.6e-195 686.8 577 59.3
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 2.1e-195 686.4 577 58.9
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 2.7e-195 686.0 586 57.3
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 1.0e-194 684.1 625 55.8
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 1.1e-193 680.6 581 57.8
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 1.9e-193 679.9 586 58.2
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 1.9e-193 679.9 572 59.4
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 4.3e-193 678.7 670 52.7
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 2.8e-192 676.0 574 58.9
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 3.7e-192 675.6 612 55.6
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 3.4e-190 669.1 624 54.2
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 1.7e-189 666.8 565 58.8
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 1.2e-187 660.6 570 57.7
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 1.0e-186 657.5 579 57.3
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 2.5e-185 652.9 630 54.3
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 2.5e-185 652.9 648 52.6
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 7.4e-185 651.4 576 56.1
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 6.3e-184 648.3 632 54.3
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 3.1e-183 646.0 576 57.3
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 7.7e-182 641.3 631 53.2
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.3e-181 640.6 627 52.3
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 2.7e-179 632.9 652 52.1
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 3.0e-178 629.4 552 55.4
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 2.0e-177 626.7 654 51.7
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 2.2e-176 623.2 797 43.0
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 5.3e-175 618.6 930 41.1
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 2.5e-172 609.8 567 54.5
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 7.2e-172 608.2 689 48.6
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 3.6e-171 605.9 500 58.6
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 3.6e-171 605.9 602 52.7
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.4e-170 604.0 602 52.0
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.8e-170 603.6 579 56.6
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 1.1e-169 600.9 575 53.0
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 1.1e-169 600.9 568 54.0
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 5.5e-164 582.0 572 52.6
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 3.5e-158 562.8 575 52.9
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 5.5e-156 555.4 642 48.6
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 1.0e-149 534.6 582 50.2
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 4.0e-146 522.7 577 48.5
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 7.5e-145 518.5 570 46.8
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 8.3e-144 515.0 574 47.0
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 9.2e-143 511.5 379 64.6
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 2.1e-139 500.4 577 44.9
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 1.1e-135 488.0 581 45.1
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 5.6e-132 475.7 559 47.6
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 2.6e-129 466.8 380 58.9
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 2.1e-126 457.2 454 50.4
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 3.7e-120 436.4 359 59.3
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 4.9e-120 436.0 688 38.2
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 2.7e-118 430.3 312 64.4
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 6.6e-117 425.6 379 58.3
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 4.6e-110 402.9 293 63.8
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 7.3e-108 395.6 330 57.6
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 3.1e-106 390.2 324 60.2
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 7.1e-103 379.0 434 47.0
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 1.1e-98 365.2 443 42.9
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 9.9e-97 358.6 492 40.4
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 3.3e-92 343.6 475 41.3
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 2.1e-91 340.9 351 51.6
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 6.4e-88 329.3 469 40.5
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 1.8e-82 311.2 333 49.5
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 1.2e-81 308.5 585 35.2
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 6.5e-80 302.8 443 44.0
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 6.5e-72 276.2 268 54.9
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.7e-64 251.5 154 77.3
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 5.0e-64 250.0 543 29.8
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 3.1e-58 230.7 215 54.4
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 8.5e-56 222.6 389 35.2
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 1.5e-55 221.9 156 69.9
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 4.2e-55 220.3 287 43.6
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 3.0e-53 214.2 332 39.5
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 4.5e-49 200.3 150 62.7
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 8.5e-48 196.1 283 43.1
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 1.1e-47 195.7 199 52.8
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 9.4e-47 192.6 181 48.1
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 9.4e-47 192.6 234 46.6
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 4.7e-46 190.3 146 65.1
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.4e-45 188.7 135 67.4
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 3.4e-44 184.1 200 47.0
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 4.1e-42 177.2 344 35.5
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 2.6e-36 157.9 207 41.5
Aqoxy3G01439 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.0e-33 148.3 92 78.3
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 1.0e-32 146.0 212 39.6
COL.COLO4_25459 Corchorus olitorius HOM05D000751 ORTHO05D005618 3.3e-31 141.0 118 63.6
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 9.5e-31 139.4 297 35.0
Nn2g10857 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.8e-29 135.2 84 77.4
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 6.8e-29 133.3 85 71.8
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 8.3e-27 126.3 279 31.2
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 2.4e-26 124.8 152 39.5
Psat4g182280 Pisum sativum HOM05D000751 ORTHO05D005618 7.0e-26 123.2 82 74.4
Sopen07g005100 Solanum pennellii HOM05D000002 ORTHO05D000001 8.9e-21 106.3 119 52.1
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 7.5e-20 103.2 104 49.0
Gorai.003G081200 Gossypium raimondii HOM05D000751 ORTHO05D005618 1.3e-19 102.4 70 72.9
Sc06g0007910 Simmondsia chinensis HOM05D000751 ORTHO05D005618 1.1e-18 99.4 80 52.5
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 3.2e-18 97.8 80 58.8
CAN.G101.3 Capsicum annuum HOM05D000751 ORTHO05D005618 1.3e-16 92.4 111 50.5
Hma1.2p1_2432F.1_g322050 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.7e-16 92.0 146 39.0
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 8.1e-14 83.2 101 44.6
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 4.4e-12 77.4 97 48.5
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 3.2e-10 71.2 81 46.9
Aqoxy1G02674 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 9.2e-10 69.7 96 44.8
Rhsim03G0091700 Rhododendron simsii HOM05D000751 ORTHO05D340051 4.3e-07 60.8 79 41.8


User provided reference genes

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